Gene annotation
Transcriptome id Sobic.009G205200.1
Synonym Sb09g026200
Functional annotation OsFBX170 - F-box domain containing protein, expressed
UniProt A0A1B6PA85
Pfam PF12937
Panther DB PTHR20995:SF21 PTHR20995
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G52880 : F-box family protein
RAP-DB (Rice) LOC_Os05g45040.1 : OsFBX170 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044289
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G205200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G121100 expressed protein -
2 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
3 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
4 Sobic.007G104800 expressed protein -
5 Sobic.006G200600 expressed protein -
6 Sobic.003G345400 NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
7 Sobic.001G119300 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
8 Sobic.003G248200 NLI interacting factor-like phosphatase, putative, expressed -
9 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
10 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
11 Sobic.006G088100 coiled-coil domain-containing protein 55, putative, expressed K13206: coiled-coil domain-containing protein 55
12 Sobic.004G353200 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
13 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
14 Sobic.002G399100 zinc finger, RING-type, putative, expressed K15688: E3 ubiquitin-protein ligase MUL1
15 Sobic.004G094300 protein kinase domain containing protein, expressed K04424: ZAK, sterile alpha motif and leucine zipper containing kinase AZK
16 Sobic.006G228500 coiled-coil domain-containing protein, putative, expressed K13115: coiled-coil domain-containing protein 130
17 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
18 Sobic.001G497300 protein kinase domain containing protein, expressed -
19 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
20 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48


Gene co-expression network
sample Sobic009G205200 Sobic009G205200 Sobic004G121100 Sobic004G121100 Sobic009G205200--Sobic004G121100 Sobic001G107500 Sobic001G107500 Sobic009G205200--Sobic001G107500 Sobic002G350300 Sobic002G350300 Sobic009G205200--Sobic002G350300 Sobic007G104800 Sobic007G104800 Sobic009G205200--Sobic007G104800 Sobic006G200600 Sobic006G200600 Sobic009G205200--Sobic006G200600 Sobic003G345400 Sobic003G345400 Sobic009G205200--Sobic003G345400 Sobic001G119300 Sobic001G119300 Sobic009G205200--Sobic001G119300 Sobic003G248200 Sobic003G248200 Sobic009G205200--Sobic003G248200 Sobic008G179700 Sobic008G179700 Sobic009G205200--Sobic008G179700 Sobic004G121100--Sobic009G205200 Sobic004G121100--Sobic006G200600 Sobic006G228500 Sobic006G228500 Sobic004G121100--Sobic006G228500 Sobic001G281600 Sobic001G281600 Sobic004G121100--Sobic001G281600 Sobic009G259400 Sobic009G259400 Sobic004G121100--Sobic009G259400 Sobic007G078500 Sobic007G078500 Sobic004G121100--Sobic007G078500 Sobic001G080700 Sobic001G080700 Sobic004G121100--Sobic001G080700 Sobic004G121100--Sobic002G350300 Sobic010G251000 Sobic010G251000 Sobic004G121100--Sobic010G251000 Sobic002G320500 Sobic002G320500 Sobic001G107500--Sobic002G320500 Sobic006G133800 Sobic006G133800 Sobic001G107500--Sobic006G133800 Sobic002G157000 Sobic002G157000 Sobic001G107500--Sobic002G157000 Sobic009G065100 Sobic009G065100 Sobic001G107500--Sobic009G065100 Sobic001G090400 Sobic001G090400 Sobic001G107500--Sobic001G090400 Sobic010G056200 Sobic010G056200 Sobic001G107500--Sobic010G056200 Sobic001G497300 Sobic001G497300 Sobic001G107500--Sobic001G497300 Sobic001G107500--Sobic007G104800 Sobic004G205600 Sobic004G205600 Sobic001G107500--Sobic004G205600 Sobic002G350300--Sobic008G179700 Sobic002G350300--Sobic009G205200 Sobic009G179700 Sobic009G179700 Sobic002G350300--Sobic009G179700 Sobic002G350300--Sobic001G107500 Sobic001G512700 Sobic001G512700 Sobic002G350300--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic002G350300--Sobic007G132400 Sobic010G028300 Sobic010G028300 Sobic002G350300--Sobic010G028300 Sobic002G350300--Sobic001G119300 Sobic006G088100 Sobic006G088100 Sobic002G350300--Sobic006G088100 Sobic007G104800--Sobic001G497300 Sobic004G021100 Sobic004G021100 Sobic007G104800--Sobic004G021100 Sobic007G104800--Sobic001G119300 Sobic003G187400 Sobic003G187400 Sobic007G104800--Sobic003G187400 Sobic007G200600 Sobic007G200600 Sobic007G104800--Sobic007G200600 Sobic007G104800--Sobic001G512700 Sobic007G104800--Sobic004G205600 Sobic007G026300 Sobic007G026300 Sobic007G104800--Sobic007G026300 Sobic007G104800--Sobic001G107500 Sobic004G353200 Sobic004G353200 Sobic006G200600--Sobic004G353200 Sobic006G200600--Sobic001G281600 Sobic006G200600--Sobic004G121100 Sobic001G392300 Sobic001G392300 Sobic006G200600--Sobic001G392300 Sobic006G200600--Sobic010G251000 Sobic008G047800 Sobic008G047800 Sobic006G200600--Sobic008G047800 Sobic006G200600--Sobic009G205200 Sobic007G078600 Sobic007G078600 Sobic006G200600--Sobic007G078600 Sobic006G200600--Sobic003G248200 Sobic003G345400--Sobic009G205200 Sobic003G345400--Sobic001G107500 Sobic003G345400--Sobic002G350300 Sobic003G345400--Sobic004G121100 Sobic009G034200 Sobic009G034200 Sobic003G345400--Sobic009G034200 Sobic003G345400--Sobic006G228500 Sobic001G333200 Sobic001G333200 Sobic003G345400--Sobic001G333200 Sobic003G345400--Sobic001G119300 Sobic003G345400--Sobic010G056200 Sobic001G119300--Sobic007G104800 Sobic001G119300--Sobic007G200600 Sobic001G119300--Sobic007G026300 Sobic001G119300--Sobic002G350300 Sobic001G119300--Sobic006G088100 Sobic001G119300--Sobic009G205200 Sobic002G200100 Sobic002G200100 Sobic001G119300--Sobic002G200100 Sobic001G371200 Sobic001G371200 Sobic001G119300--Sobic001G371200 Sobic002G090800 Sobic002G090800 Sobic001G119300--Sobic002G090800 Sobic003G248200--Sobic001G512700 Sobic001G356600 Sobic001G356600 Sobic003G248200--Sobic001G356600 Sobic003G248200--Sobic008G179700 Sobic004G066200 Sobic004G066200 Sobic003G248200--Sobic004G066200 Sobic003G248200--Sobic008G047800 Sobic003G248200--Sobic006G200600 Sobic003G081000 Sobic003G081000 Sobic003G248200--Sobic003G081000 Sobic004G274200 Sobic004G274200 Sobic003G248200--Sobic004G274200 Sobic002G297200 Sobic002G297200 Sobic003G248200--Sobic002G297200 Sobic008G179700--Sobic002G350300 Sobic008G179700--Sobic003G248200 Sobic008G179700--Sobic001G281600 Sobic008G179700--Sobic001G356600 Sobic008G179700--Sobic009G179700 Sobic004G084300 Sobic004G084300 Sobic008G179700--Sobic004G084300 Sobic003G401100 Sobic003G401100 Sobic008G179700--Sobic003G401100 Sobic002G126500 Sobic002G126500 Sobic008G179700--Sobic002G126500 Sobic008G179700--Sobic001G512700
Octagon: transcription factors


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