Gene annotation
Transcriptome id Sobic.004G094300.2,Sobic.004G094300.1
Synonym
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1Z5RLP0 , A0A194YNL6
Pfam PF14381 PF07714
Panther DB PTHR23257 PTHR23257:SF518
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology K04424; ZAK, sterile alpha motif and leucine zipper containing kinase AZK
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G11850 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g12810.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a034556
Brachypodium KQJ94061 , KQJ94060 , KQJ94059
Barley HORVU6Hr1G039740.10 , HORVU6Hr1G039740.15 , HORVU6Hr1G039740.13 , HORVU6Hr1G039740.12 , HORVU6Hr1G039740.11 , HORVU6Hr1G039740.16 , HORVU6Hr1G039740.14 , HORVU6Hr1G039740.9 , HORVU6Hr1G039740.8 , HORVU6Hr1G039740.3 , HORVU6Hr1G039740.2 , HORVU6Hr1G039740.1 , HORVU6Hr1G039740.7 , HORVU6Hr1G039740.6 , HORVU6Hr1G039740.5 , HORVU6Hr1G039740.4
Wheat TraesCS6D02G173100 , TraesCS6D02G173100 , TraesCS6D02G173100 , TraesCS6A02G186100 , TraesCS6A02G186100 , TraesCS6A02G186100 , TraesCS6A02G186100 , TraesCS6B02G215100 , TraesCS6B02G215100 , TraesCS6B02G215100 , TraesCS6B02G215100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
2 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
3 Sobic.008G165000 LSD1 zinc finger domain containing protein, expressed -
4 Sobic.009G228700 expressed protein -
5 Sobic.004G121100 expressed protein -
6 Sobic.007G207400 Ser/Thr protein phosphatase family protein, putative, expressed K04460: serine/threonine-protein phosphatase 5
7 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
8 Sobic.010G243400 expressed protein -
9 Sobic.004G003401 - -
10 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
11 Sobic.001G287800 GTPase-activating protein, putative, expressed K12493: ADP-ribosylation factor GTPase-activating protein 2/3
12 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
13 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
14 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
15 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
16 Sobic.003G248200 NLI interacting factor-like phosphatase, putative, expressed -
17 Sobic.007G104800 expressed protein -
18 Sobic.007G159500 uncharacterized protein, YigZ family, putative, expressed -
19 Sobic.001G119300 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
20 Sobic.006G017000 WD domain, G-beta repeat domain containing protein, expressed K12862: PLRG1, PRL1, pleiotropic regulator 1


Gene co-expression network
sample Sobic004G094300 Sobic004G094300 Sobic009G205200 Sobic009G205200 Sobic004G094300--Sobic009G205200 Sobic002G350300 Sobic002G350300 Sobic004G094300--Sobic002G350300 Sobic008G165000 Sobic008G165000 Sobic004G094300--Sobic008G165000 Sobic009G228700 Sobic009G228700 Sobic004G094300--Sobic009G228700 Sobic004G121100 Sobic004G121100 Sobic004G094300--Sobic004G121100 Sobic007G207400 Sobic007G207400 Sobic004G094300--Sobic007G207400 Sobic004G066200 Sobic004G066200 Sobic004G094300--Sobic004G066200 Sobic010G243400 Sobic010G243400 Sobic004G094300--Sobic010G243400 Sobic004G003401 Sobic004G003401 Sobic004G094300--Sobic004G003401 Sobic009G205200--Sobic004G121100 Sobic001G107500 Sobic001G107500 Sobic009G205200--Sobic001G107500 Sobic009G205200--Sobic002G350300 Sobic007G104800 Sobic007G104800 Sobic009G205200--Sobic007G104800 Sobic006G200600 Sobic006G200600 Sobic009G205200--Sobic006G200600 Sobic003G345400 Sobic003G345400 Sobic009G205200--Sobic003G345400 Sobic001G119300 Sobic001G119300 Sobic009G205200--Sobic001G119300 Sobic003G248200 Sobic003G248200 Sobic009G205200--Sobic003G248200 Sobic008G179700 Sobic008G179700 Sobic009G205200--Sobic008G179700 Sobic002G350300--Sobic008G179700 Sobic002G350300--Sobic009G205200 Sobic009G179700 Sobic009G179700 Sobic002G350300--Sobic009G179700 Sobic002G350300--Sobic001G107500 Sobic001G512700 Sobic001G512700 Sobic002G350300--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic002G350300--Sobic007G132400 Sobic010G028300 Sobic010G028300 Sobic002G350300--Sobic010G028300 Sobic002G350300--Sobic001G119300 Sobic006G088100 Sobic006G088100 Sobic002G350300--Sobic006G088100 Sobic008G165000--Sobic010G243400 Sobic006G254600 Sobic006G254600 Sobic008G165000--Sobic006G254600 Sobic001G489700 Sobic001G489700 Sobic008G165000--Sobic001G489700 Sobic002G378200 Sobic002G378200 Sobic008G165000--Sobic002G378200 Sobic001G085500 Sobic001G085500 Sobic008G165000--Sobic001G085500 Sobic008G165000--Sobic004G094300 Sobic002G040700 Sobic002G040700 Sobic008G165000--Sobic002G040700 Sobic001G512400 Sobic001G512400 Sobic008G165000--Sobic001G512400 Sobic001G522900 Sobic001G522900 Sobic008G165000--Sobic001G522900 Sobic009G228700--Sobic004G066200 Sobic009G207000 Sobic009G207000 Sobic009G228700--Sobic009G207000 Sobic001G091300 Sobic001G091300 Sobic009G228700--Sobic001G091300 Sobic001G323000 Sobic001G323000 Sobic009G228700--Sobic001G323000 Sobic001G356600 Sobic001G356600 Sobic009G228700--Sobic001G356600 Sobic006G249700 Sobic006G249700 Sobic009G228700--Sobic006G249700 Sobic006G148200 Sobic006G148200 Sobic009G228700--Sobic006G148200 Sobic003G312200 Sobic003G312200 Sobic009G228700--Sobic003G312200 Sobic001G124200 Sobic001G124200 Sobic009G228700--Sobic001G124200 Sobic004G121100--Sobic009G205200 Sobic004G121100--Sobic006G200600 Sobic006G228500 Sobic006G228500 Sobic004G121100--Sobic006G228500 Sobic001G281600 Sobic001G281600 Sobic004G121100--Sobic001G281600 Sobic009G259400 Sobic009G259400 Sobic004G121100--Sobic009G259400 Sobic007G078500 Sobic007G078500 Sobic004G121100--Sobic007G078500 Sobic001G080700 Sobic001G080700 Sobic004G121100--Sobic001G080700 Sobic004G121100--Sobic002G350300 Sobic010G251000 Sobic010G251000 Sobic004G121100--Sobic010G251000 Sobic010G240900 Sobic010G240900 Sobic007G207400--Sobic010G240900 Sobic007G207400--Sobic004G094300 Sobic007G207400--Sobic002G350300 Sobic002G262600 Sobic002G262600 Sobic007G207400--Sobic002G262600 Sobic001G297500 Sobic001G297500 Sobic007G207400--Sobic001G297500 Sobic004G117900 Sobic004G117900 Sobic007G207400--Sobic004G117900 Sobic007G207400--Sobic009G205200 Sobic007G207400--Sobic004G066200 Sobic007G207400--Sobic003G248200 Sobic004G066200--Sobic001G356600 Sobic004G066200--Sobic009G228700 Sobic006G101700 Sobic006G101700 Sobic004G066200--Sobic006G101700 Sobic004G066200--Sobic001G080700 Sobic001G392300 Sobic001G392300 Sobic004G066200--Sobic001G392300 Sobic003G352200 Sobic003G352200 Sobic004G066200--Sobic003G352200 Sobic004G066200--Sobic003G248200 Sobic004G353200 Sobic004G353200 Sobic004G066200--Sobic004G353200 Sobic004G066200--Sobic001G091300 Sobic010G243400--Sobic008G165000 Sobic007G056100 Sobic007G056100 Sobic010G243400--Sobic007G056100 Sobic010G261600 Sobic010G261600 Sobic010G243400--Sobic010G261600 Sobic003G243700 Sobic003G243700 Sobic010G243400--Sobic003G243700 Sobic009G041700 Sobic009G041700 Sobic010G243400--Sobic009G041700 Sobic009G224000 Sobic009G224000 Sobic010G243400--Sobic009G224000 Sobic010G243400--Sobic004G003401 Sobic008G173400 Sobic008G173400 Sobic010G243400--Sobic008G173400 Sobic001G421400 Sobic001G421400 Sobic010G243400--Sobic001G421400 Sobic004G003401--Sobic009G228700 Sobic002G303600 Sobic002G303600 Sobic004G003401--Sobic002G303600 Sobic004G003401--Sobic001G091300 Sobic004G003401--Sobic010G243400 Sobic006G180000 Sobic006G180000 Sobic004G003401--Sobic006G180000 Sobic004G003401--Sobic003G312200 Sobic001G114000 Sobic001G114000 Sobic004G003401--Sobic001G114000 Sobic004G003401--Sobic009G041700 Sobic004G003401--Sobic006G200600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.