Gene annotation
Transcriptome id Sobic.007G159500.3
Synonym Sb07g023310
Functional annotation uncharacterized protein, YigZ family, putative, expressed
UniProt A0A1Z5RA69
Pfam PF01205
Panther DB PTHR16301:SF0 PTHR16301
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38090 : Ribosomal protein S5 domain 2-like superfamily protein
RAP-DB (Rice) LOC_Os08g37310.1 : uncharacterized protein, YigZ family, putative, expressed
MaizeGDB (Corn) Zm00025a005459
Brachypodium KQJ98674 , KQJ98675 , KQJ98676 , KQJ98677 , KQJ98673 , PNT68294
Barley -
Wheat TraesCS2D02G471900 , TraesCS2A02G472000 , TraesCS2B02G494700
Populus -


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cDNA sequences
Sobic.007G159500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
2 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
3 Sobic.009G049300 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.007G078500 serine/threonine-protein kinase HT1, putative, expressed -
5 Sobic.004G121100 expressed protein -
6 Sobic.002G110700 uncharacterized ACR, YggU family COG1872 containing protein, expressed K09131: uncharacterized protein
7 Sobic.004G094300 protein kinase domain containing protein, expressed K04424: ZAK, sterile alpha motif and leucine zipper containing kinase AZK
8 Sobic.009G165800 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
9 Sobic.007G166100 no apical meristem protein, putative, expressed -
10 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
11 Sobic.002G054300 ABC transporter, ATP-binding protein, putative, expressed K06184: ATP-binding cassette, subfamily F, member 1
12 Sobic.001G126100 OsFBO16 - F-box and other domain containing protein, expressed -
13 Sobic.007G108500 lipid phosphatase protein, putative, expressed K18693: DPP1, DPPL, diacylglycerol diphosphate phosphatase / phosphatidate phosphatase
14 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
15 Sobic.001G395400 ubiquitin-conjugating enzyme, putative, expressed K10578: UBE2J1, NCUBE1, ubiquitin-conjugating enzyme E2 J1
16 Sobic.006G209400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
17 Sobic.003G345400 NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
18 Sobic.001G048100 OsAPRL5 adenosine 5\'-phosphosulfate reductase-like OsAPRL5, expressed -
19 Sobic.006G228500 coiled-coil domain-containing protein, putative, expressed K13115: coiled-coil domain-containing protein 130
20 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF


Gene co-expression network
sample Sobic007G159500 Sobic007G159500 Sobic002G350300 Sobic002G350300 Sobic007G159500--Sobic002G350300 Sobic001G080700 Sobic001G080700 Sobic007G159500--Sobic001G080700 Sobic009G049300 Sobic009G049300 Sobic007G159500--Sobic009G049300 Sobic007G078500 Sobic007G078500 Sobic007G159500--Sobic007G078500 Sobic004G121100 Sobic004G121100 Sobic007G159500--Sobic004G121100 Sobic002G110700 Sobic002G110700 Sobic007G159500--Sobic002G110700 Sobic004G094300 Sobic004G094300 Sobic007G159500--Sobic004G094300 Sobic009G165800 Sobic009G165800 Sobic007G159500--Sobic009G165800 Sobic007G166100 Sobic007G166100 Sobic007G159500--Sobic007G166100 Sobic008G179700 Sobic008G179700 Sobic002G350300--Sobic008G179700 Sobic009G205200 Sobic009G205200 Sobic002G350300--Sobic009G205200 Sobic009G179700 Sobic009G179700 Sobic002G350300--Sobic009G179700 Sobic001G107500 Sobic001G107500 Sobic002G350300--Sobic001G107500 Sobic001G512700 Sobic001G512700 Sobic002G350300--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic002G350300--Sobic007G132400 Sobic010G028300 Sobic010G028300 Sobic002G350300--Sobic010G028300 Sobic001G119300 Sobic001G119300 Sobic002G350300--Sobic001G119300 Sobic006G088100 Sobic006G088100 Sobic002G350300--Sobic006G088100 Sobic001G392300 Sobic001G392300 Sobic001G080700--Sobic001G392300 Sobic001G080700--Sobic009G165800 Sobic010G251000 Sobic010G251000 Sobic001G080700--Sobic010G251000 Sobic004G066200 Sobic004G066200 Sobic001G080700--Sobic004G066200 Sobic003G264200 Sobic003G264200 Sobic001G080700--Sobic003G264200 Sobic009G222500 Sobic009G222500 Sobic001G080700--Sobic009G222500 Sobic006G101700 Sobic006G101700 Sobic001G080700--Sobic006G101700 Sobic001G332500 Sobic001G332500 Sobic001G080700--Sobic001G332500 Sobic001G007000 Sobic001G007000 Sobic001G080700--Sobic001G007000 Sobic005G160400 Sobic005G160400 Sobic009G049300--Sobic005G160400 Sobic007G078600 Sobic007G078600 Sobic009G049300--Sobic007G078600 Sobic006G096900 Sobic006G096900 Sobic009G049300--Sobic006G096900 Sobic010G082700 Sobic010G082700 Sobic009G049300--Sobic010G082700 Sobic009G049300--Sobic001G080700 Sobic010G021500 Sobic010G021500 Sobic009G049300--Sobic010G021500 Sobic007G136800 Sobic007G136800 Sobic009G049300--Sobic007G136800 Sobic002G121600 Sobic002G121600 Sobic009G049300--Sobic002G121600 Sobic009G049300--Sobic007G159500 Sobic001G281600 Sobic001G281600 Sobic007G078500--Sobic001G281600 Sobic007G078500--Sobic007G078600 Sobic007G078500--Sobic004G121100 Sobic007G078500--Sobic009G179700 Sobic007G078500--Sobic008G179700 Sobic008G076800 Sobic008G076800 Sobic007G078500--Sobic008G076800 Sobic007G078500--Sobic001G080700 Sobic010G279700 Sobic010G279700 Sobic007G078500--Sobic010G279700 Sobic001G375700 Sobic001G375700 Sobic007G078500--Sobic001G375700 Sobic004G121100--Sobic009G205200 Sobic006G200600 Sobic006G200600 Sobic004G121100--Sobic006G200600 Sobic006G228500 Sobic006G228500 Sobic004G121100--Sobic006G228500 Sobic004G121100--Sobic001G281600 Sobic009G259400 Sobic009G259400 Sobic004G121100--Sobic009G259400 Sobic004G121100--Sobic007G078500 Sobic004G121100--Sobic001G080700 Sobic004G121100--Sobic002G350300 Sobic004G121100--Sobic010G251000 Sobic002G110700--Sobic009G165800 Sobic010G027600 Sobic010G027600 Sobic002G110700--Sobic010G027600 Sobic002G110700--Sobic004G121100 Sobic010G184100 Sobic010G184100 Sobic002G110700--Sobic010G184100 Sobic002G110700--Sobic001G080700 Sobic002G110700--Sobic007G078500 Sobic002G110700--Sobic007G166100 Sobic003G250500 Sobic003G250500 Sobic002G110700--Sobic003G250500 Sobic002G113900 Sobic002G113900 Sobic002G110700--Sobic002G113900 Sobic004G094300--Sobic009G205200 Sobic004G094300--Sobic002G350300 Sobic008G165000 Sobic008G165000 Sobic004G094300--Sobic008G165000 Sobic009G228700 Sobic009G228700 Sobic004G094300--Sobic009G228700 Sobic004G094300--Sobic004G121100 Sobic007G207400 Sobic007G207400 Sobic004G094300--Sobic007G207400 Sobic004G094300--Sobic004G066200 Sobic010G243400 Sobic010G243400 Sobic004G094300--Sobic010G243400 Sobic004G003401 Sobic004G003401 Sobic004G094300--Sobic004G003401 Sobic009G165800--Sobic001G080700 Sobic001G047400 Sobic001G047400 Sobic009G165800--Sobic001G047400 Sobic009G165800--Sobic006G101700 Sobic009G165800--Sobic002G110700 Sobic003G015900 Sobic003G015900 Sobic009G165800--Sobic003G015900 Sobic010G083700 Sobic010G083700 Sobic009G165800--Sobic010G083700 Sobic009G165800--Sobic010G251000 Sobic009G165800--Sobic004G121100 Sobic009G165800--Sobic003G264200 Sobic001G395400 Sobic001G395400 Sobic007G166100--Sobic001G395400 Sobic010G000900 Sobic010G000900 Sobic007G166100--Sobic010G000900 Sobic004G356900 Sobic004G356900 Sobic007G166100--Sobic004G356900 Sobic002G400000 Sobic002G400000 Sobic007G166100--Sobic002G400000 Sobic004G104900 Sobic004G104900 Sobic007G166100--Sobic004G104900 Sobic009G004600 Sobic009G004600 Sobic007G166100--Sobic009G004600 Sobic001G085100 Sobic001G085100 Sobic007G166100--Sobic001G085100 Sobic007G166100--Sobic010G027600 Sobic007G166100--Sobic004G066200
Octagon: transcription factors


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