Gene annotation
Transcriptome id Sobic.006G228500.1
Synonym Sb06g029700
Functional annotation coiled-coil domain-containing protein, putative, expressed
UniProt C5YGN5
Pfam PF04502
Panther DB PTHR12111 PTHR12111:SF2
NCBI CDD KOG2990; C2C2-type Zn-finger protein
KEGG Orthology K13115; coiled-coil domain-containing protein 130
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G25682 : Family of unknown function (DUF572)
RAP-DB (Rice) LOC_Os02g21880.1 : coiled-coil domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a057120
Brachypodium KQJ94464
Barley -
Wheat TraesCS1B02G055900 , TraesCS1D02G043700 , TraesCS1A02G043200
Populus -


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cDNA sequences
Sobic.006G228500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G164400 expressed protein -
2 Sobic.004G121100 expressed protein -
3 Sobic.007G108500 lipid phosphatase protein, putative, expressed K18693: DPP1, DPPL, diacylglycerol diphosphate phosphatase / phosphatidate phosphatase
4 Sobic.001G318432 - -
5 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
6 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
7 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
8 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
9 Sobic.002G031400 OsFBL39 - F-box domain and LRR containing protein, expressed -
10 Sobic.003G345400 NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
11 Sobic.004G174400 ZOS2-09 - C2H2 zinc finger protein, expressed -
12 Sobic.008G162900 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
13 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
14 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
15 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
16 Sobic.001G375700 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
17 Sobic.003G084700 - -
18 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
19 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
20 Sobic.009G034200 CBL-interacting protein kinase 1(PubMedID : 26320239)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit


Gene co-expression network
sample Sobic006G228500 Sobic006G228500 Sobic004G164400 Sobic004G164400 Sobic006G228500--Sobic004G164400 Sobic004G121100 Sobic004G121100 Sobic006G228500--Sobic004G121100 Sobic007G108500 Sobic007G108500 Sobic006G228500--Sobic007G108500 Sobic001G318432 Sobic001G318432 Sobic006G228500--Sobic001G318432 Sobic001G107500 Sobic001G107500 Sobic006G228500--Sobic001G107500 Sobic001G298600 Sobic001G298600 Sobic006G228500--Sobic001G298600 Sobic010G056200 Sobic010G056200 Sobic006G228500--Sobic010G056200 Sobic009G065100 Sobic009G065100 Sobic006G228500--Sobic009G065100 Sobic002G031400 Sobic002G031400 Sobic006G228500--Sobic002G031400 Sobic004G164400--Sobic006G228500 Sobic004G164400--Sobic007G108500 Sobic004G174400 Sobic004G174400 Sobic004G164400--Sobic004G174400 Sobic002G006600 Sobic002G006600 Sobic004G164400--Sobic002G006600 Sobic002G104100 Sobic002G104100 Sobic004G164400--Sobic002G104100 Sobic006G105400 Sobic006G105400 Sobic004G164400--Sobic006G105400 Sobic004G164400--Sobic001G318432 Sobic006G274600 Sobic006G274600 Sobic004G164400--Sobic006G274600 Sobic001G126100 Sobic001G126100 Sobic004G164400--Sobic001G126100 Sobic009G205200 Sobic009G205200 Sobic004G121100--Sobic009G205200 Sobic006G200600 Sobic006G200600 Sobic004G121100--Sobic006G200600 Sobic004G121100--Sobic006G228500 Sobic001G281600 Sobic001G281600 Sobic004G121100--Sobic001G281600 Sobic009G259400 Sobic009G259400 Sobic004G121100--Sobic009G259400 Sobic007G078500 Sobic007G078500 Sobic004G121100--Sobic007G078500 Sobic001G080700 Sobic001G080700 Sobic004G121100--Sobic001G080700 Sobic002G350300 Sobic002G350300 Sobic004G121100--Sobic002G350300 Sobic010G251000 Sobic010G251000 Sobic004G121100--Sobic010G251000 Sobic007G108500--Sobic006G228500 Sobic007G108500--Sobic004G164400 Sobic007G108500--Sobic004G174400 Sobic007G108500--Sobic010G056200 Sobic004G083700 Sobic004G083700 Sobic007G108500--Sobic004G083700 Sobic007G108500--Sobic009G065100 Sobic007G108500--Sobic001G107500 Sobic009G215800 Sobic009G215800 Sobic007G108500--Sobic009G215800 Sobic001G375700 Sobic001G375700 Sobic007G108500--Sobic001G375700 Sobic001G214300 Sobic001G214300 Sobic001G318432--Sobic001G214300 Sobic006G048600 Sobic006G048600 Sobic001G318432--Sobic006G048600 Sobic003G029700 Sobic003G029700 Sobic001G318432--Sobic003G029700 Sobic001G318432--Sobic006G228500 Sobic004G341900 Sobic004G341900 Sobic001G318432--Sobic004G341900 Sobic006G048500 Sobic006G048500 Sobic001G318432--Sobic006G048500 Sobic003G429650 Sobic003G429650 Sobic001G318432--Sobic003G429650 Sobic002G006900 Sobic002G006900 Sobic001G318432--Sobic002G006900 Sobic006G182900 Sobic006G182900 Sobic001G318432--Sobic006G182900 Sobic002G320500 Sobic002G320500 Sobic001G107500--Sobic002G320500 Sobic006G133800 Sobic006G133800 Sobic001G107500--Sobic006G133800 Sobic002G157000 Sobic002G157000 Sobic001G107500--Sobic002G157000 Sobic001G107500--Sobic009G065100 Sobic001G090400 Sobic001G090400 Sobic001G107500--Sobic001G090400 Sobic001G107500--Sobic010G056200 Sobic001G497300 Sobic001G497300 Sobic001G107500--Sobic001G497300 Sobic007G104800 Sobic007G104800 Sobic001G107500--Sobic007G104800 Sobic004G205600 Sobic004G205600 Sobic001G107500--Sobic004G205600 Sobic007G132400 Sobic007G132400 Sobic001G298600--Sobic007G132400 Sobic001G298600--Sobic006G228500 Sobic001G298600--Sobic004G121100 Sobic001G298600--Sobic001G107500 Sobic002G310200 Sobic002G310200 Sobic001G298600--Sobic002G310200 Sobic006G273200 Sobic006G273200 Sobic001G298600--Sobic006G273200 Sobic001G298600--Sobic009G215800 Sobic003G176600 Sobic003G176600 Sobic001G298600--Sobic003G176600 Sobic001G298600--Sobic001G281600 Sobic010G056200--Sobic001G107500 Sobic004G113800 Sobic004G113800 Sobic010G056200--Sobic004G113800 Sobic010G056200--Sobic004G083700 Sobic007G052900 Sobic007G052900 Sobic010G056200--Sobic007G052900 Sobic003G324000 Sobic003G324000 Sobic010G056200--Sobic003G324000 Sobic010G056200--Sobic009G065100 Sobic010G056200--Sobic006G228500 Sobic002G309800 Sobic002G309800 Sobic010G056200--Sobic002G309800 Sobic009G157200 Sobic009G157200 Sobic010G056200--Sobic009G157200 Sobic009G065100--Sobic002G320500 Sobic009G065100--Sobic002G157000 Sobic008G173900 Sobic008G173900 Sobic009G065100--Sobic008G173900 Sobic009G065100--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic009G065100--Sobic004G084300 Sobic002G144933 Sobic002G144933 Sobic009G065100--Sobic002G144933 Sobic009G065100--Sobic002G309800 Sobic009G065100--Sobic001G107500 Sobic003G197800 Sobic003G197800 Sobic009G065100--Sobic003G197800 Sobic010G277500 Sobic010G277500 Sobic002G031400--Sobic010G277500 Sobic007G161000 Sobic007G161000 Sobic002G031400--Sobic007G161000 Sobic001G035900 Sobic001G035900 Sobic002G031400--Sobic001G035900 Sobic003G254000 Sobic003G254000 Sobic002G031400--Sobic003G254000 Sobic008G011100 Sobic008G011100 Sobic002G031400--Sobic008G011100 Sobic010G176550 Sobic010G176550 Sobic002G031400--Sobic010G176550 Sobic003G280800 Sobic003G280800 Sobic002G031400--Sobic003G280800 Sobic009G260500 Sobic009G260500 Sobic002G031400--Sobic009G260500 Sobic004G258700 Sobic004G258700 Sobic002G031400--Sobic004G258700
Octagon: transcription factors


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