Gene annotation
Transcriptome id Sobic.004G174400.1
Synonym Sb04g022470
Functional annotation ZOS2-09 - C2H2 zinc finger protein, expressed
UniProt C5XU70
Pfam -
Panther DB PTHR14003
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G06634 : zinc finger (C2H2 type) family protein
RAP-DB (Rice) LOC_Os02g34680.1 : ZOS2-09 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a020626 , Zm00025a031594
Brachypodium KQJ99851 , KQJ99850 , KQJ99849
Barley -
Wheat TraesCS6D02G185200 , TraesCS6D02G185200 , TraesCS6A02G199800 , TraesCS6A02G199800 , TraesCS6B02G230700 , TraesCS6B02G230700 , TraesCS6B02G230700
Populus -


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cDNA sequences
Sobic.004G174400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G108500 lipid phosphatase protein, putative, expressed K18693: DPP1, DPPL, diacylglycerol diphosphate phosphatase / phosphatidate phosphatase
2 Sobic.004G164400 expressed protein -
3 Sobic.006G228500 coiled-coil domain-containing protein, putative, expressed K13115: coiled-coil domain-containing protein 130
4 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
5 Sobic.001G375700 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
6 Sobic.001G035900 expressed protein K13156: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
7 Sobic.002G031400 OsFBL39 - F-box domain and LRR containing protein, expressed -
8 Sobic.010G176550 - -
9 Sobic.010G005600 SEC14 cytosolic factor family protein, putative, expressed -
10 Sobic.001G418700 SLT1 protein, putative, expressed -
11 Sobic.004G113800 CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
12 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
13 Sobic.001G427300 glycosyl transferase, group 1 domain containing protein, expressed K06119: sulfoquinovosyltransferase
14 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
15 Sobic.007G052900 acetyltransferase, GNAT family, putative, expressed -
16 Sobic.002G064750 - -
17 Sobic.006G145200 expressed protein -
18 Sobic.003G179201 - -
19 Sobic.003G254000 PPR repeat domain containing protein, putative, expressed -
20 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -


Gene co-expression network
sample Sobic004G174400 Sobic004G174400 Sobic007G108500 Sobic007G108500 Sobic004G174400--Sobic007G108500 Sobic004G164400 Sobic004G164400 Sobic004G174400--Sobic004G164400 Sobic006G228500 Sobic006G228500 Sobic004G174400--Sobic006G228500 Sobic007G136800 Sobic007G136800 Sobic004G174400--Sobic007G136800 Sobic001G375700 Sobic001G375700 Sobic004G174400--Sobic001G375700 Sobic001G035900 Sobic001G035900 Sobic004G174400--Sobic001G035900 Sobic002G031400 Sobic002G031400 Sobic004G174400--Sobic002G031400 Sobic010G176550 Sobic010G176550 Sobic004G174400--Sobic010G176550 Sobic010G005600 Sobic010G005600 Sobic004G174400--Sobic010G005600 Sobic007G108500--Sobic006G228500 Sobic007G108500--Sobic004G164400 Sobic007G108500--Sobic004G174400 Sobic010G056200 Sobic010G056200 Sobic007G108500--Sobic010G056200 Sobic004G083700 Sobic004G083700 Sobic007G108500--Sobic004G083700 Sobic009G065100 Sobic009G065100 Sobic007G108500--Sobic009G065100 Sobic001G107500 Sobic001G107500 Sobic007G108500--Sobic001G107500 Sobic009G215800 Sobic009G215800 Sobic007G108500--Sobic009G215800 Sobic007G108500--Sobic001G375700 Sobic004G164400--Sobic006G228500 Sobic004G164400--Sobic007G108500 Sobic004G164400--Sobic004G174400 Sobic002G006600 Sobic002G006600 Sobic004G164400--Sobic002G006600 Sobic002G104100 Sobic002G104100 Sobic004G164400--Sobic002G104100 Sobic006G105400 Sobic006G105400 Sobic004G164400--Sobic006G105400 Sobic001G318432 Sobic001G318432 Sobic004G164400--Sobic001G318432 Sobic006G274600 Sobic006G274600 Sobic004G164400--Sobic006G274600 Sobic001G126100 Sobic001G126100 Sobic004G164400--Sobic001G126100 Sobic006G228500--Sobic004G164400 Sobic004G121100 Sobic004G121100 Sobic006G228500--Sobic004G121100 Sobic006G228500--Sobic007G108500 Sobic006G228500--Sobic001G318432 Sobic006G228500--Sobic001G107500 Sobic001G298600 Sobic001G298600 Sobic006G228500--Sobic001G298600 Sobic006G228500--Sobic010G056200 Sobic006G228500--Sobic009G065100 Sobic006G228500--Sobic002G031400 Sobic003G398700 Sobic003G398700 Sobic007G136800--Sobic003G398700 Sobic010G126000 Sobic010G126000 Sobic007G136800--Sobic010G126000 Sobic003G168100 Sobic003G168100 Sobic007G136800--Sobic003G168100 Sobic007G136800--Sobic001G375700 Sobic006G031800 Sobic006G031800 Sobic007G136800--Sobic006G031800 Sobic005G100600 Sobic005G100600 Sobic007G136800--Sobic005G100600 Sobic001G043800 Sobic001G043800 Sobic007G136800--Sobic001G043800 Sobic003G011300 Sobic003G011300 Sobic007G136800--Sobic003G011300 Sobic010G032900 Sobic010G032900 Sobic007G136800--Sobic010G032900 Sobic004G084300 Sobic004G084300 Sobic001G375700--Sobic004G084300 Sobic002G126500 Sobic002G126500 Sobic001G375700--Sobic002G126500 Sobic001G281600 Sobic001G281600 Sobic001G375700--Sobic001G281600 Sobic003G197800 Sobic003G197800 Sobic001G375700--Sobic003G197800 Sobic001G375700--Sobic001G107500 Sobic001G375700--Sobic007G136800 Sobic007G054400 Sobic007G054400 Sobic001G375700--Sobic007G054400 Sobic008G113100 Sobic008G113100 Sobic001G375700--Sobic008G113100 Sobic001G227200 Sobic001G227200 Sobic001G375700--Sobic001G227200 Sobic003G254000 Sobic003G254000 Sobic001G035900--Sobic003G254000 Sobic001G035900--Sobic002G031400 Sobic002G064750 Sobic002G064750 Sobic001G035900--Sobic002G064750 Sobic007G099100 Sobic007G099100 Sobic001G035900--Sobic007G099100 Sobic001G274200 Sobic001G274200 Sobic001G035900--Sobic001G274200 Sobic003G429650 Sobic003G429650 Sobic001G035900--Sobic003G429650 Sobic001G035900--Sobic010G176550 Sobic007G161000 Sobic007G161000 Sobic001G035900--Sobic007G161000 Sobic009G024000 Sobic009G024000 Sobic001G035900--Sobic009G024000 Sobic010G277500 Sobic010G277500 Sobic002G031400--Sobic010G277500 Sobic002G031400--Sobic007G161000 Sobic002G031400--Sobic001G035900 Sobic002G031400--Sobic003G254000 Sobic008G011100 Sobic008G011100 Sobic002G031400--Sobic008G011100 Sobic002G031400--Sobic010G176550 Sobic003G280800 Sobic003G280800 Sobic002G031400--Sobic003G280800 Sobic009G260500 Sobic009G260500 Sobic002G031400--Sobic009G260500 Sobic004G258700 Sobic004G258700 Sobic002G031400--Sobic004G258700 Sobic010G176550--Sobic002G031400 Sobic004G034800 Sobic004G034800 Sobic010G176550--Sobic004G034800 Sobic001G261573 Sobic001G261573 Sobic010G176550--Sobic001G261573 Sobic003G217700 Sobic003G217700 Sobic010G176550--Sobic003G217700 Sobic007G185700 Sobic007G185700 Sobic010G176550--Sobic007G185700 Sobic010G176550--Sobic001G035900 Sobic003G234900 Sobic003G234900 Sobic010G176550--Sobic003G234900 Sobic010G176550--Sobic010G005600 Sobic010G176550--Sobic010G032900 Sobic007G052900 Sobic007G052900 Sobic010G005600--Sobic007G052900 Sobic010G005600--Sobic010G176550 Sobic010G005600--Sobic002G031400 Sobic001G159400 Sobic001G159400 Sobic010G005600--Sobic001G159400 Sobic010G005600--Sobic004G174400 Sobic010G005600--Sobic009G215800 Sobic002G351900 Sobic002G351900 Sobic010G005600--Sobic002G351900 Sobic001G384900 Sobic001G384900 Sobic010G005600--Sobic001G384900 Sobic010G005600--Sobic010G056200
Octagon: transcription factors


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