Gene annotation
Transcriptome id Sobic.001G427300.1
Synonym Sb01g040150, SQD2
Functional annotation glycosyl transferase, group 1 domain containing protein, expressed
UniProt C5WQ54
Pfam PF00534 PF13579
Panther DB PTHR12526:SF372 PTHR12526
NCBI CDD KOG1111; N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase
KEGG Orthology K06119; sulfoquinovosyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01220 : sulfoquinovosyldiacylglycerol 2
RAP-DB (Rice) LOC_Os03g15840.1 : glycosyl transferase, group 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a001722 , Zm00025a052798
Brachypodium PNT77695 , KQK22435
Barley HORVU4Hr1G061040.17 , HORVU4Hr1G061040.16 , HORVU4Hr1G061040.15 , HORVU4Hr1G061040.14 , HORVU4Hr1G061040.13 , HORVU4Hr1G061040.12 , HORVU4Hr1G061040.11 , HORVU4Hr1G061040.10 , HORVU4Hr1G061040.19 , HORVU4Hr1G061040.4 , HORVU4Hr1G061040.2 , HORVU4Hr1G061040.1 , HORVU4Hr1G061040.9 , HORVU4Hr1G061040.8 , HORVU4Hr1G061040.7 , HORVU4Hr1G061040.6 , HORVU4Hr1G061040.5 , HORVU4Hr1G061040.3
Wheat TraesCS4D02G214700 , TraesCS4B02G214000 , TraesCS4A02G090600 , TraesCS4A02G090600
Populus -


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cDNA sequences
Sobic.001G427300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G486300 phosphatidylinositol transfer, putative, expressed -
2 Sobic.009G134500 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
3 Sobic.004G164400 expressed protein -
4 Sobic.008G136200 spotted leaf 11, putative, expressed -
5 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
6 Sobic.009G215800 OsFBX173 - F-box domain containing protein, expressed -
7 Sobic.004G290800 GRAS family transcription factor(PubMedID : 23915383)@scarecrow, putative, expressed -
8 Sobic.009G127900 - -
9 Sobic.004G174400 ZOS2-09 - C2H2 zinc finger protein, expressed -
10 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2
11 Sobic.007G145200 serine esterase family protein, putative, expressed -
12 Sobic.001G318432 - -
13 Sobic.002G380500 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2
14 Sobic.001G306000 protein kinase, putative, expressed -
15 Sobic.006G228500 coiled-coil domain-containing protein, putative, expressed K13115: coiled-coil domain-containing protein 130
16 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
17 Sobic.001G497300 protein kinase domain containing protein, expressed -
18 Sobic.005G023900 expressed protein -
19 Sobic.001G067200 expressed protein -
20 Sobic.003G345400 NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase


Gene co-expression network
sample Sobic001G427300 Sobic001G427300 Sobic001G486300 Sobic001G486300 Sobic001G427300--Sobic001G486300 Sobic009G134500 Sobic009G134500 Sobic001G427300--Sobic009G134500 Sobic004G164400 Sobic004G164400 Sobic001G427300--Sobic004G164400 Sobic008G136200 Sobic008G136200 Sobic001G427300--Sobic008G136200 Sobic001G420200 Sobic001G420200 Sobic001G427300--Sobic001G420200 Sobic009G215800 Sobic009G215800 Sobic001G427300--Sobic009G215800 Sobic004G290800 Sobic004G290800 Sobic001G427300--Sobic004G290800 Sobic009G127900 Sobic009G127900 Sobic001G427300--Sobic009G127900 Sobic004G174400 Sobic004G174400 Sobic001G427300--Sobic004G174400 Sobic005G023900 Sobic005G023900 Sobic001G486300--Sobic005G023900 Sobic001G486300--Sobic001G420200 Sobic003G268300 Sobic003G268300 Sobic001G486300--Sobic003G268300 Sobic007G011400 Sobic007G011400 Sobic001G486300--Sobic007G011400 Sobic001G497300 Sobic001G497300 Sobic001G486300--Sobic001G497300 Sobic001G486300--Sobic004G290800 Sobic001G107500 Sobic001G107500 Sobic001G486300--Sobic001G107500 Sobic001G251700 Sobic001G251700 Sobic001G486300--Sobic001G251700 Sobic003G220200 Sobic003G220200 Sobic001G486300--Sobic003G220200 Sobic006G246900 Sobic006G246900 Sobic009G134500--Sobic006G246900 Sobic006G082600 Sobic006G082600 Sobic009G134500--Sobic006G082600 Sobic009G134500--Sobic009G127900 Sobic001G162300 Sobic001G162300 Sobic009G134500--Sobic001G162300 Sobic002G157000 Sobic002G157000 Sobic009G134500--Sobic002G157000 Sobic008G041700 Sobic008G041700 Sobic009G134500--Sobic008G041700 Sobic005G187200 Sobic005G187200 Sobic009G134500--Sobic005G187200 Sobic007G037900 Sobic007G037900 Sobic009G134500--Sobic007G037900 Sobic007G178700 Sobic007G178700 Sobic009G134500--Sobic007G178700 Sobic006G228500 Sobic006G228500 Sobic004G164400--Sobic006G228500 Sobic007G108500 Sobic007G108500 Sobic004G164400--Sobic007G108500 Sobic004G164400--Sobic004G174400 Sobic002G006600 Sobic002G006600 Sobic004G164400--Sobic002G006600 Sobic002G104100 Sobic002G104100 Sobic004G164400--Sobic002G104100 Sobic006G105400 Sobic006G105400 Sobic004G164400--Sobic006G105400 Sobic001G318432 Sobic001G318432 Sobic004G164400--Sobic001G318432 Sobic006G274600 Sobic006G274600 Sobic004G164400--Sobic006G274600 Sobic001G126100 Sobic001G126100 Sobic004G164400--Sobic001G126100 Sobic002G144933 Sobic002G144933 Sobic008G136200--Sobic002G144933 Sobic007G205800 Sobic007G205800 Sobic008G136200--Sobic007G205800 Sobic008G136200--Sobic007G011400 Sobic008G136200--Sobic009G215800 Sobic009G065100 Sobic009G065100 Sobic008G136200--Sobic009G065100 Sobic001G094000 Sobic001G094000 Sobic008G136200--Sobic001G094000 Sobic008G136200--Sobic002G157000 Sobic003G197800 Sobic003G197800 Sobic008G136200--Sobic003G197800 Sobic009G087800 Sobic009G087800 Sobic008G136200--Sobic009G087800 Sobic001G274200 Sobic001G274200 Sobic001G420200--Sobic001G274200 Sobic001G420200--Sobic002G157000 Sobic001G420200--Sobic003G268300 Sobic008G173900 Sobic008G173900 Sobic001G420200--Sobic008G173900 Sobic002G248400 Sobic002G248400 Sobic001G420200--Sobic002G248400 Sobic007G096600 Sobic007G096600 Sobic001G420200--Sobic007G096600 Sobic001G420200--Sobic007G037900 Sobic001G420200--Sobic002G144933 Sobic001G420200--Sobic007G178700 Sobic009G215800--Sobic009G065100 Sobic004G084300 Sobic004G084300 Sobic009G215800--Sobic004G084300 Sobic009G215800--Sobic008G136200 Sobic001G281600 Sobic001G281600 Sobic009G215800--Sobic001G281600 Sobic001G222500 Sobic001G222500 Sobic009G215800--Sobic001G222500 Sobic009G215800--Sobic001G107500 Sobic003G084700 Sobic003G084700 Sobic009G215800--Sobic003G084700 Sobic001G407200 Sobic001G407200 Sobic009G215800--Sobic001G407200 Sobic008G067600 Sobic008G067600 Sobic009G215800--Sobic008G067600 Sobic004G290800--Sobic009G127900 Sobic004G290800--Sobic001G420200 Sobic004G290800--Sobic007G178700 Sobic004G290800--Sobic007G037900 Sobic004G290800--Sobic003G268300 Sobic004G290800--Sobic001G162300 Sobic004G290800--Sobic002G157000 Sobic001G111900 Sobic001G111900 Sobic004G290800--Sobic001G111900 Sobic001G446900 Sobic001G446900 Sobic004G290800--Sobic001G446900 Sobic009G127900--Sobic007G178700 Sobic009G127900--Sobic003G268300 Sobic009G127900--Sobic001G446900 Sobic006G066650 Sobic006G066650 Sobic009G127900--Sobic006G066650 Sobic009G127900--Sobic004G290800 Sobic010G026400 Sobic010G026400 Sobic009G127900--Sobic010G026400 Sobic009G127900--Sobic007G037900 Sobic009G127900--Sobic008G173900 Sobic009G127900--Sobic001G111900 Sobic004G174400--Sobic007G108500 Sobic004G174400--Sobic004G164400 Sobic004G174400--Sobic006G228500 Sobic007G136800 Sobic007G136800 Sobic004G174400--Sobic007G136800 Sobic001G375700 Sobic001G375700 Sobic004G174400--Sobic001G375700 Sobic001G035900 Sobic001G035900 Sobic004G174400--Sobic001G035900 Sobic002G031400 Sobic002G031400 Sobic004G174400--Sobic002G031400 Sobic010G176550 Sobic010G176550 Sobic004G174400--Sobic010G176550 Sobic010G005600 Sobic010G005600 Sobic004G174400--Sobic010G005600
Octagon: transcription factors


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