Gene annotation
Transcriptome id Sobic.009G215800.1
Synonym
Functional annotation OsFBX173 - F-box domain containing protein, expressed
UniProt A0A1B6P9U2
Pfam -
Panther DB PTHR32212 PTHR32212:SF102
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g46320.1 : OsFBX173 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK00121
Barley HORVU3Hr1G099000.1
Wheat -
Populus -


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cDNA sequences
Sobic.009G215800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
2 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
3 Sobic.008G136200 spotted leaf 11, putative, expressed -
4 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
5 Sobic.001G222500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
6 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
7 Sobic.003G084700 - -
8 Sobic.001G407200 SacI homology domain containing protein, expressed -
9 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
10 Sobic.010G056000 GAGA-binding protein, putative, expressed -
11 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
12 Sobic.002G310200 expressed protein -
13 Sobic.002G320500 MYB family transcription factor, putative, expressed -
14 Sobic.009G134500 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
15 Sobic.002G309800 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
16 Sobic.010G028800 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
17 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2
18 Sobic.001G497300 protein kinase domain containing protein, expressed -
19 Sobic.001G533700 STE_PAK_Ste20_STLK.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
20 Sobic.002G122600 ankyrin repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic009G215800 Sobic009G215800 Sobic009G065100 Sobic009G065100 Sobic009G215800--Sobic009G065100 Sobic004G084300 Sobic004G084300 Sobic009G215800--Sobic004G084300 Sobic008G136200 Sobic008G136200 Sobic009G215800--Sobic008G136200 Sobic001G281600 Sobic001G281600 Sobic009G215800--Sobic001G281600 Sobic001G222500 Sobic001G222500 Sobic009G215800--Sobic001G222500 Sobic001G107500 Sobic001G107500 Sobic009G215800--Sobic001G107500 Sobic003G084700 Sobic003G084700 Sobic009G215800--Sobic003G084700 Sobic001G407200 Sobic001G407200 Sobic009G215800--Sobic001G407200 Sobic008G067600 Sobic008G067600 Sobic009G215800--Sobic008G067600 Sobic002G320500 Sobic002G320500 Sobic009G065100--Sobic002G320500 Sobic002G157000 Sobic002G157000 Sobic009G065100--Sobic002G157000 Sobic008G173900 Sobic008G173900 Sobic009G065100--Sobic008G173900 Sobic009G065100--Sobic009G215800 Sobic009G065100--Sobic004G084300 Sobic002G144933 Sobic002G144933 Sobic009G065100--Sobic002G144933 Sobic002G309800 Sobic002G309800 Sobic009G065100--Sobic002G309800 Sobic009G065100--Sobic001G107500 Sobic003G197800 Sobic003G197800 Sobic009G065100--Sobic003G197800 Sobic008G047800 Sobic008G047800 Sobic004G084300--Sobic008G047800 Sobic004G084300--Sobic001G222500 Sobic003G241200 Sobic003G241200 Sobic004G084300--Sobic003G241200 Sobic002G006900 Sobic002G006900 Sobic004G084300--Sobic002G006900 Sobic010G236400 Sobic010G236400 Sobic004G084300--Sobic010G236400 Sobic009G040600 Sobic009G040600 Sobic004G084300--Sobic009G040600 Sobic004G084300--Sobic008G067600 Sobic004G084300--Sobic009G065100 Sobic007G132400 Sobic007G132400 Sobic004G084300--Sobic007G132400 Sobic008G136200--Sobic002G144933 Sobic007G205800 Sobic007G205800 Sobic008G136200--Sobic007G205800 Sobic007G011400 Sobic007G011400 Sobic008G136200--Sobic007G011400 Sobic008G136200--Sobic009G215800 Sobic008G136200--Sobic009G065100 Sobic001G094000 Sobic001G094000 Sobic008G136200--Sobic001G094000 Sobic008G136200--Sobic002G157000 Sobic008G136200--Sobic003G197800 Sobic009G087800 Sobic009G087800 Sobic008G136200--Sobic009G087800 Sobic010G279700 Sobic010G279700 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic003G401100 Sobic003G401100 Sobic001G281600--Sobic003G401100 Sobic004G121100 Sobic004G121100 Sobic001G281600--Sobic004G121100 Sobic001G281600--Sobic009G215800 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic001G222500--Sobic004G084300 Sobic001G222500--Sobic008G047800 Sobic001G155000 Sobic001G155000 Sobic001G222500--Sobic001G155000 Sobic002G310200 Sobic002G310200 Sobic001G222500--Sobic002G310200 Sobic009G126400 Sobic009G126400 Sobic001G222500--Sobic009G126400 Sobic001G222500--Sobic009G040600 Sobic001G222500--Sobic002G006900 Sobic003G052200 Sobic003G052200 Sobic001G222500--Sobic003G052200 Sobic007G096000 Sobic007G096000 Sobic001G222500--Sobic007G096000 Sobic001G107500--Sobic002G320500 Sobic006G133800 Sobic006G133800 Sobic001G107500--Sobic006G133800 Sobic001G107500--Sobic002G157000 Sobic001G107500--Sobic009G065100 Sobic001G090400 Sobic001G090400 Sobic001G107500--Sobic001G090400 Sobic010G056200 Sobic010G056200 Sobic001G107500--Sobic010G056200 Sobic001G497300 Sobic001G497300 Sobic001G107500--Sobic001G497300 Sobic007G104800 Sobic007G104800 Sobic001G107500--Sobic007G104800 Sobic004G205600 Sobic004G205600 Sobic001G107500--Sobic004G205600 Sobic003G084700--Sobic001G107500 Sobic007G078600 Sobic007G078600 Sobic003G084700--Sobic007G078600 Sobic003G084700--Sobic009G065100 Sobic004G057400 Sobic004G057400 Sobic003G084700--Sobic004G057400 Sobic003G084700--Sobic008G067600 Sobic001G315100 Sobic001G315100 Sobic003G084700--Sobic001G315100 Sobic003G084700--Sobic001G090400 Sobic004G271900 Sobic004G271900 Sobic003G084700--Sobic004G271900 Sobic003G084700--Sobic009G215800 Sobic009G210500 Sobic009G210500 Sobic001G407200--Sobic009G210500 Sobic008G162900 Sobic008G162900 Sobic001G407200--Sobic008G162900 Sobic005G013200 Sobic005G013200 Sobic001G407200--Sobic005G013200 Sobic001G407200--Sobic002G144933 Sobic010G129200 Sobic010G129200 Sobic001G407200--Sobic010G129200 Sobic010G277500 Sobic010G277500 Sobic001G407200--Sobic010G277500 Sobic001G407200--Sobic009G126400 Sobic001G407200--Sobic004G084300 Sobic001G407200--Sobic008G047800 Sobic008G067600--Sobic001G090400 Sobic003G445400 Sobic003G445400 Sobic008G067600--Sobic003G445400 Sobic008G067600--Sobic004G084300 Sobic002G157300 Sobic002G157300 Sobic008G067600--Sobic002G157300 Sobic008G067600--Sobic001G315100 Sobic001G512700 Sobic001G512700 Sobic008G067600--Sobic001G512700 Sobic009G000500 Sobic009G000500 Sobic008G067600--Sobic009G000500 Sobic008G067600--Sobic004G057400 Sobic008G067600--Sobic008G047800
Octagon: transcription factors


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