Gene annotation
Transcriptome id Sobic.002G122600.1
Synonym XBAT35, Sb02g010610
Functional annotation ankyrin repeat domain containing protein, expressed
UniProt C5X526
Pfam PF13920 PF13637
Panther DB PTHR24188 PTHR24188:SF44
NCBI CDD KOG4172; Predicted E3 ubiquitin ligase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G23280 : XB3 ortholog 5 in Arabidopsis thaliana
RAP-DB (Rice) LOC_Os07g26490.1 : ankyrin repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a045824
Brachypodium KQK16453
Barley HORVU1Hr1G019320.1 , HORVU1Hr1G019320.2 , HORVU1Hr1G019320.3 , HORVU1Hr1G019320.4 , HORVU1Hr1G019320.5 , HORVU1Hr1G019320.6
Wheat TraesCS1D02G089400 , TraesCS1D02G089400 , TraesCS1D02G089400 , TraesCS1A02G088100 , TraesCS1A02G088100 , TraesCS1B02G107100
Populus -


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cDNA sequences
Sobic.002G122600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
2 Sobic.009G215800 OsFBX173 - F-box domain containing protein, expressed -
3 Sobic.010G268300 protein phosphatase 2C, putative, expressed -
4 Sobic.002G309800 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
5 Sobic.004G083700 expressed protein -
6 Sobic.001G429300 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
7 Sobic.003G078800 PB1 domain containing protein, expressed -
8 Sobic.003G196900 esterase/lipase/thioesterase, putative, expressed K06889: uncharacterized protein
9 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
10 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
11 Sobic.001G004700 expressed protein -
12 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
13 Sobic.006G171700 - -
14 Sobic.010G280100 expressed protein -
15 Sobic.007G108500 lipid phosphatase protein, putative, expressed K18693: DPP1, DPPL, diacylglycerol diphosphate phosphatase / phosphatidate phosphatase
16 Sobic.006G252300 BSD domain-containing protein, putative, expressed -
17 Sobic.001G291100 tetraspanin family protein, putative, expressed -
18 Sobic.006G130800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
19 Sobic.007G078500 serine/threonine-protein kinase HT1, putative, expressed -
20 Sobic.003G309900 OsFBX26 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic002G122600 Sobic002G122600 Sobic001G281600 Sobic001G281600 Sobic002G122600--Sobic001G281600 Sobic009G215800 Sobic009G215800 Sobic002G122600--Sobic009G215800 Sobic010G268300 Sobic010G268300 Sobic002G122600--Sobic010G268300 Sobic002G309800 Sobic002G309800 Sobic002G122600--Sobic002G309800 Sobic004G083700 Sobic004G083700 Sobic002G122600--Sobic004G083700 Sobic001G429300 Sobic001G429300 Sobic002G122600--Sobic001G429300 Sobic003G078800 Sobic003G078800 Sobic002G122600--Sobic003G078800 Sobic003G196900 Sobic003G196900 Sobic002G122600--Sobic003G196900 Sobic009G017400 Sobic009G017400 Sobic002G122600--Sobic009G017400 Sobic010G279700 Sobic010G279700 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic003G401100 Sobic003G401100 Sobic001G281600--Sobic003G401100 Sobic004G121100 Sobic004G121100 Sobic001G281600--Sobic004G121100 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic009G065100 Sobic009G065100 Sobic009G215800--Sobic009G065100 Sobic009G215800--Sobic004G084300 Sobic008G136200 Sobic008G136200 Sobic009G215800--Sobic008G136200 Sobic009G215800--Sobic001G281600 Sobic001G222500 Sobic001G222500 Sobic009G215800--Sobic001G222500 Sobic001G107500 Sobic001G107500 Sobic009G215800--Sobic001G107500 Sobic003G084700 Sobic003G084700 Sobic009G215800--Sobic003G084700 Sobic001G407200 Sobic001G407200 Sobic009G215800--Sobic001G407200 Sobic008G067600 Sobic008G067600 Sobic009G215800--Sobic008G067600 Sobic010G268300--Sobic001G281600 Sobic010G268300--Sobic002G122600 Sobic010G268300--Sobic008G136200 Sobic010G268300--Sobic003G401100 Sobic010G268300--Sobic009G215800 Sobic004G246700 Sobic004G246700 Sobic010G268300--Sobic004G246700 Sobic004G021200 Sobic004G021200 Sobic010G268300--Sobic004G021200 Sobic007G009400 Sobic007G009400 Sobic010G268300--Sobic007G009400 Sobic010G268300--Sobic010G279700 Sobic002G309800--Sobic009G065100 Sobic001G253200 Sobic001G253200 Sobic002G309800--Sobic001G253200 Sobic010G056200 Sobic010G056200 Sobic002G309800--Sobic010G056200 Sobic007G054400 Sobic007G054400 Sobic002G309800--Sobic007G054400 Sobic002G309800--Sobic009G215800 Sobic005G079800 Sobic005G079800 Sobic002G309800--Sobic005G079800 Sobic009G070100 Sobic009G070100 Sobic002G309800--Sobic009G070100 Sobic007G078600 Sobic007G078600 Sobic002G309800--Sobic007G078600 Sobic004G087600 Sobic004G087600 Sobic002G309800--Sobic004G087600 Sobic004G083700--Sobic010G056200 Sobic007G052900 Sobic007G052900 Sobic004G083700--Sobic007G052900 Sobic007G108500 Sobic007G108500 Sobic004G083700--Sobic007G108500 Sobic003G309900 Sobic003G309900 Sobic004G083700--Sobic003G309900 Sobic004G083700--Sobic002G309800 Sobic010G280100 Sobic010G280100 Sobic004G083700--Sobic010G280100 Sobic001G291100 Sobic001G291100 Sobic004G083700--Sobic001G291100 Sobic004G083700--Sobic002G122600 Sobic009G198900 Sobic009G198900 Sobic004G083700--Sobic009G198900 Sobic001G429300--Sobic010G268300 Sobic001G429300--Sobic010G280100 Sobic006G273200 Sobic006G273200 Sobic001G429300--Sobic006G273200 Sobic001G429300--Sobic002G122600 Sobic001G429300--Sobic004G083700 Sobic008G165700 Sobic008G165700 Sobic001G429300--Sobic008G165700 Sobic003G018900 Sobic003G018900 Sobic001G429300--Sobic003G018900 Sobic006G171700 Sobic006G171700 Sobic001G429300--Sobic006G171700 Sobic001G429300--Sobic001G281600 Sobic001G294200 Sobic001G294200 Sobic003G078800--Sobic001G294200 Sobic003G078800--Sobic002G122600 Sobic001G372000 Sobic001G372000 Sobic003G078800--Sobic001G372000 Sobic006G228700 Sobic006G228700 Sobic003G078800--Sobic006G228700 Sobic006G264500 Sobic006G264500 Sobic003G078800--Sobic006G264500 Sobic010G067700 Sobic010G067700 Sobic003G078800--Sobic010G067700 Sobic001G004700 Sobic001G004700 Sobic003G078800--Sobic001G004700 Sobic009G157200 Sobic009G157200 Sobic003G078800--Sobic009G157200 Sobic006G047100 Sobic006G047100 Sobic003G078800--Sobic006G047100 Sobic003G196900--Sobic009G050900 Sobic003G196900--Sobic001G281600 Sobic001G096300 Sobic001G096300 Sobic003G196900--Sobic001G096300 Sobic003G196900--Sobic002G122600 Sobic009G112400 Sobic009G112400 Sobic003G196900--Sobic009G112400 Sobic008G083000 Sobic008G083000 Sobic003G196900--Sobic008G083000 Sobic003G196900--Sobic010G279700 Sobic003G196900--Sobic009G215800 Sobic003G196900--Sobic010G268300 Sobic006G199200 Sobic006G199200 Sobic009G017400--Sobic006G199200 Sobic001G493200 Sobic001G493200 Sobic009G017400--Sobic001G493200 Sobic009G017400--Sobic004G021200 Sobic002G276100 Sobic002G276100 Sobic009G017400--Sobic002G276100 Sobic009G017400--Sobic001G281600 Sobic003G266001 Sobic003G266001 Sobic009G017400--Sobic003G266001 Sobic002G313400 Sobic002G313400 Sobic009G017400--Sobic002G313400 Sobic009G017400--Sobic002G122600 Sobic010G205800 Sobic010G205800 Sobic009G017400--Sobic010G205800
Octagon: transcription factors


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