Gene annotation
Transcriptome id Sobic.001G429300.1
Synonym Sb01g040360, MAPKKK8, ATMEKK1, MEKK1, ARAKIN
Functional annotation STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt C5WQ75
Pfam PF14531
Panther DB PTHR24361 PTHR24361:SF318
NCBI CDD KOG0198; MEKK and related serine/threonine protein kinases
KEGG Orthology K13414; mitogen-activated protein kinase kinase kinase 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08500 : MAPK/ERK kinase kinase 1
RAP-DB (Rice) LOC_Os03g15570.1 : STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a001695 , Zm00025a052821
Brachypodium KQK22470
Barley HORVU4Hr1G061550.1
Wheat TraesCS4D02G217000 , TraesCS4A02G087700
Populus -


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cDNA sequences
Sobic.001G429300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G268300 protein phosphatase 2C, putative, expressed -
2 Sobic.010G280100 expressed protein -
3 Sobic.006G273200 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@protein kinase family protein, putative, expressed K14500: BR-signaling kinase
4 Sobic.002G122600 ankyrin repeat domain containing protein, expressed -
5 Sobic.004G083700 expressed protein -
6 Sobic.008G165700 expressed protein -
7 Sobic.003G018900 bromodomain containing protein, expressed K11684: bromodomain-containing factor 1
8 Sobic.006G171700 - -
9 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
10 Sobic.003G245900 membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.003G324100 haloacid dehalogenase, putative, expressed K01094: phosphatidylglycerophosphatase GEP4
12 Sobic.009G094800 sugar porter, putative, expressed -
13 Sobic.003G309900 OsFBX26 - F-box domain containing protein, expressed -
14 Sobic.006G119800 leucine rich repeat containing protein, expressed -
15 Sobic.009G157200 OsFBL23 - F-box domain and LRR containing protein, expressed K13463: coronatine-insensitive protein 1
16 Sobic.004G174400 ZOS2-09 - C2H2 zinc finger protein, expressed -
17 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
18 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
19 Sobic.006G038400 YL1 nuclear protein C-terminal domain containing protein, expressed K11667: INO80C, INO80 complex subunit C
20 Sobic.009G232700 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit


Gene co-expression network
sample Sobic001G429300 Sobic001G429300 Sobic010G268300 Sobic010G268300 Sobic001G429300--Sobic010G268300 Sobic010G280100 Sobic010G280100 Sobic001G429300--Sobic010G280100 Sobic006G273200 Sobic006G273200 Sobic001G429300--Sobic006G273200 Sobic002G122600 Sobic002G122600 Sobic001G429300--Sobic002G122600 Sobic004G083700 Sobic004G083700 Sobic001G429300--Sobic004G083700 Sobic008G165700 Sobic008G165700 Sobic001G429300--Sobic008G165700 Sobic003G018900 Sobic003G018900 Sobic001G429300--Sobic003G018900 Sobic006G171700 Sobic006G171700 Sobic001G429300--Sobic006G171700 Sobic001G281600 Sobic001G281600 Sobic001G429300--Sobic001G281600 Sobic010G268300--Sobic001G281600 Sobic010G268300--Sobic002G122600 Sobic008G136200 Sobic008G136200 Sobic010G268300--Sobic008G136200 Sobic003G401100 Sobic003G401100 Sobic010G268300--Sobic003G401100 Sobic009G215800 Sobic009G215800 Sobic010G268300--Sobic009G215800 Sobic004G246700 Sobic004G246700 Sobic010G268300--Sobic004G246700 Sobic004G021200 Sobic004G021200 Sobic010G268300--Sobic004G021200 Sobic007G009400 Sobic007G009400 Sobic010G268300--Sobic007G009400 Sobic010G279700 Sobic010G279700 Sobic010G268300--Sobic010G279700 Sobic009G198900 Sobic009G198900 Sobic010G280100--Sobic009G198900 Sobic004G119000 Sobic004G119000 Sobic010G280100--Sobic004G119000 Sobic003G324000 Sobic003G324000 Sobic010G280100--Sobic003G324000 Sobic007G052900 Sobic007G052900 Sobic010G280100--Sobic007G052900 Sobic010G280100--Sobic008G136200 Sobic009G087800 Sobic009G087800 Sobic010G280100--Sobic009G087800 Sobic007G205800 Sobic007G205800 Sobic010G280100--Sobic007G205800 Sobic001G368400 Sobic001G368400 Sobic010G280100--Sobic001G368400 Sobic010G280100--Sobic006G273200 Sobic001G497300 Sobic001G497300 Sobic006G273200--Sobic001G497300 Sobic009G065100 Sobic009G065100 Sobic006G273200--Sobic009G065100 Sobic004G205600 Sobic004G205600 Sobic006G273200--Sobic004G205600 Sobic007G096000 Sobic007G096000 Sobic006G273200--Sobic007G096000 Sobic009G233300 Sobic009G233300 Sobic006G273200--Sobic009G233300 Sobic008G062000 Sobic008G062000 Sobic006G273200--Sobic008G062000 Sobic006G237400 Sobic006G237400 Sobic006G273200--Sobic006G237400 Sobic006G273200--Sobic007G205800 Sobic003G176600 Sobic003G176600 Sobic006G273200--Sobic003G176600 Sobic002G122600--Sobic001G281600 Sobic002G122600--Sobic009G215800 Sobic002G122600--Sobic010G268300 Sobic002G309800 Sobic002G309800 Sobic002G122600--Sobic002G309800 Sobic002G122600--Sobic004G083700 Sobic002G122600--Sobic001G429300 Sobic003G078800 Sobic003G078800 Sobic002G122600--Sobic003G078800 Sobic003G196900 Sobic003G196900 Sobic002G122600--Sobic003G196900 Sobic009G017400 Sobic009G017400 Sobic002G122600--Sobic009G017400 Sobic010G056200 Sobic010G056200 Sobic004G083700--Sobic010G056200 Sobic004G083700--Sobic007G052900 Sobic007G108500 Sobic007G108500 Sobic004G083700--Sobic007G108500 Sobic003G309900 Sobic003G309900 Sobic004G083700--Sobic003G309900 Sobic004G083700--Sobic002G309800 Sobic004G083700--Sobic010G280100 Sobic001G291100 Sobic001G291100 Sobic004G083700--Sobic001G291100 Sobic004G083700--Sobic002G122600 Sobic004G083700--Sobic009G198900 Sobic008G165700--Sobic006G273200 Sobic008G165700--Sobic009G233300 Sobic008G165700--Sobic010G268300 Sobic002G187801 Sobic002G187801 Sobic008G165700--Sobic002G187801 Sobic002G365100 Sobic002G365100 Sobic008G165700--Sobic002G365100 Sobic001G191100 Sobic001G191100 Sobic008G165700--Sobic001G191100 Sobic003G123000 Sobic003G123000 Sobic008G165700--Sobic003G123000 Sobic008G165700--Sobic003G018900 Sobic003G000150 Sobic003G000150 Sobic008G165700--Sobic003G000150 Sobic003G018900--Sobic006G273200 Sobic003G018900--Sobic004G021200 Sobic009G157200 Sobic009G157200 Sobic003G018900--Sobic009G157200 Sobic003G018900--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic003G018900--Sobic007G078500 Sobic003G018900--Sobic001G281600 Sobic007G115200 Sobic007G115200 Sobic003G018900--Sobic007G115200 Sobic004G087600 Sobic004G087600 Sobic003G018900--Sobic004G087600 Sobic003G250500 Sobic003G250500 Sobic003G018900--Sobic003G250500 Sobic004G227300 Sobic004G227300 Sobic006G171700--Sobic004G227300 Sobic006G171700--Sobic003G123000 Sobic006G171700--Sobic002G122600 Sobic006G171700--Sobic008G165700 Sobic006G171700--Sobic010G280100 Sobic006G171700--Sobic001G429300 Sobic006G171700--Sobic009G017400 Sobic006G171700--Sobic010G268300 Sobic002G174900 Sobic002G174900 Sobic006G171700--Sobic002G174900 Sobic001G281600--Sobic010G279700 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic001G281600--Sobic003G401100 Sobic004G121100 Sobic004G121100 Sobic001G281600--Sobic004G121100 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700
Octagon: transcription factors


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