Gene annotation
Transcriptome id Sobic.006G273200.1
Synonym Sb06g033460
Functional annotation "PKc_like super family, protein kjinases, catalytic domain" (PubMedID : 29491869)
protein kinase family protein, putative, expressed
UniProt A0A109NDJ8 , A0A120GUR9 , C6JRY5 , C5YAP2
Pfam PF13414 PF07714
Panther DB PTHR27001 PTHR27001:SF126
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K14500; BR-signaling kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G63500 : Protein kinase protein with tetratricopeptide repeat domain
RAP-DB (Rice) LOC_Os04g58750.2 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a009241 , Zm00025a057422
Brachypodium KQJ85379 , PNT66486 , PNT66484 , PNT66485 , KQJ94753 , KQJ94752 , KQJ94751 , KQJ94750
Barley HORVU7Hr1G078530.6 , HORVU7Hr1G078530.4 , HORVU7Hr1G078530.5 , HORVU7Hr1G078530.2 , HORVU7Hr1G078530.3 , HORVU7Hr1G078530.1 , HORVU2Hr1G123650.2 , HORVU2Hr1G123650.5 , HORVU2Hr1G123650.4 , HORVU2Hr1G123650.7 , HORVU2Hr1G123650.6
Wheat TraesCS2A02G582500 , TraesCS7B02G228900 , TraesCS7B02G228900 , TraesCS2D02G597600 , TraesCS2B02G604300 , TraesCS7A02G328100 , TraesCS7A02G328100 , TraesCS7D02G324900 , TraesCS7D02G324900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G497300 protein kinase domain containing protein, expressed -
2 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
3 Sobic.004G205600 bromodomain domain containing protein, expressed -
4 Sobic.007G096000 expressed protein -
5 Sobic.009G233300 60S ribosomal protein L18a-1, putative, expressed -
6 Sobic.008G062000 expressed protein K11878: PSMG4, proteasome assembly chaperone 4
7 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
8 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
9 Sobic.003G176600 expressed protein -
10 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
11 Sobic.002G310200 expressed protein -
12 Sobic.004G021200 expressed protein -
13 Sobic.009G087800 seven in absentia protein family domain containing protein, expressed K08742: E3 ubiquitin-protein ligase SIAH2
14 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
15 Sobic.004G057400 copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
16 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
17 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
18 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
19 Sobic.010G056000 GAGA-binding protein, putative, expressed -
20 Sobic.001G253700 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4


Gene co-expression network
sample Sobic006G273200 Sobic006G273200 Sobic001G497300 Sobic001G497300 Sobic006G273200--Sobic001G497300 Sobic009G065100 Sobic009G065100 Sobic006G273200--Sobic009G065100 Sobic004G205600 Sobic004G205600 Sobic006G273200--Sobic004G205600 Sobic007G096000 Sobic007G096000 Sobic006G273200--Sobic007G096000 Sobic009G233300 Sobic009G233300 Sobic006G273200--Sobic009G233300 Sobic008G062000 Sobic008G062000 Sobic006G273200--Sobic008G062000 Sobic006G237400 Sobic006G237400 Sobic006G273200--Sobic006G237400 Sobic007G205800 Sobic007G205800 Sobic006G273200--Sobic007G205800 Sobic003G176600 Sobic003G176600 Sobic006G273200--Sobic003G176600 Sobic007G104800 Sobic007G104800 Sobic001G497300--Sobic007G104800 Sobic001G512700 Sobic001G512700 Sobic001G497300--Sobic001G512700 Sobic002G006900 Sobic002G006900 Sobic001G497300--Sobic002G006900 Sobic001G497300--Sobic006G237400 Sobic001G497300--Sobic004G205600 Sobic001G413500 Sobic001G413500 Sobic001G497300--Sobic001G413500 Sobic008G047800 Sobic008G047800 Sobic001G497300--Sobic008G047800 Sobic005G023900 Sobic005G023900 Sobic001G497300--Sobic005G023900 Sobic002G157000 Sobic002G157000 Sobic001G497300--Sobic002G157000 Sobic002G320500 Sobic002G320500 Sobic009G065100--Sobic002G320500 Sobic009G065100--Sobic002G157000 Sobic008G173900 Sobic008G173900 Sobic009G065100--Sobic008G173900 Sobic009G215800 Sobic009G215800 Sobic009G065100--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic009G065100--Sobic004G084300 Sobic002G144933 Sobic002G144933 Sobic009G065100--Sobic002G144933 Sobic002G309800 Sobic002G309800 Sobic009G065100--Sobic002G309800 Sobic001G107500 Sobic001G107500 Sobic009G065100--Sobic001G107500 Sobic003G197800 Sobic003G197800 Sobic009G065100--Sobic003G197800 Sobic004G057400 Sobic004G057400 Sobic004G205600--Sobic004G057400 Sobic004G205600--Sobic001G497300 Sobic001G090400 Sobic001G090400 Sobic004G205600--Sobic001G090400 Sobic003G081000 Sobic003G081000 Sobic004G205600--Sobic003G081000 Sobic007G026300 Sobic007G026300 Sobic004G205600--Sobic007G026300 Sobic009G000500 Sobic009G000500 Sobic004G205600--Sobic009G000500 Sobic002G157300 Sobic002G157300 Sobic004G205600--Sobic002G157300 Sobic004G205600--Sobic009G065100 Sobic004G205600--Sobic002G157000 Sobic003G280800 Sobic003G280800 Sobic007G096000--Sobic003G280800 Sobic003G445400 Sobic003G445400 Sobic007G096000--Sobic003G445400 Sobic004G039700 Sobic004G039700 Sobic007G096000--Sobic004G039700 Sobic009G126400 Sobic009G126400 Sobic007G096000--Sobic009G126400 Sobic003G084900 Sobic003G084900 Sobic007G096000--Sobic003G084900 Sobic001G474600 Sobic001G474600 Sobic007G096000--Sobic001G474600 Sobic001G222500 Sobic001G222500 Sobic007G096000--Sobic001G222500 Sobic002G310200 Sobic002G310200 Sobic007G096000--Sobic002G310200 Sobic007G096000--Sobic009G000500 Sobic009G233300--Sobic006G273200 Sobic008G165700 Sobic008G165700 Sobic009G233300--Sobic008G165700 Sobic002G187801 Sobic002G187801 Sobic009G233300--Sobic002G187801 Sobic006G119800 Sobic006G119800 Sobic009G233300--Sobic006G119800 Sobic001G387600 Sobic001G387600 Sobic009G233300--Sobic001G387600 Sobic001G372500 Sobic001G372500 Sobic009G233300--Sobic001G372500 Sobic001G284800 Sobic001G284800 Sobic009G233300--Sobic001G284800 Sobic003G309900 Sobic003G309900 Sobic009G233300--Sobic003G309900 Sobic009G233300--Sobic003G176600 Sobic008G062000--Sobic006G273200 Sobic008G062000--Sobic004G205600 Sobic001G131800 Sobic001G131800 Sobic008G062000--Sobic001G131800 Sobic003G250500 Sobic003G250500 Sobic008G062000--Sobic003G250500 Sobic010G033400 Sobic010G033400 Sobic008G062000--Sobic010G033400 Sobic008G067600 Sobic008G067600 Sobic008G062000--Sobic008G067600 Sobic008G174300 Sobic008G174300 Sobic008G062000--Sobic008G174300 Sobic008G062000--Sobic007G205800 Sobic007G132400 Sobic007G132400 Sobic008G062000--Sobic007G132400 Sobic006G237400--Sobic001G497300 Sobic006G237400--Sobic008G047800 Sobic003G029700 Sobic003G029700 Sobic006G237400--Sobic003G029700 Sobic009G249200 Sobic009G249200 Sobic006G237400--Sobic009G249200 Sobic007G217000 Sobic007G217000 Sobic006G237400--Sobic007G217000 Sobic001G253700 Sobic001G253700 Sobic006G237400--Sobic001G253700 Sobic006G237400--Sobic002G310200 Sobic006G237400--Sobic001G474600 Sobic001G220300 Sobic001G220300 Sobic006G237400--Sobic001G220300 Sobic007G011400 Sobic007G011400 Sobic007G205800--Sobic007G011400 Sobic009G087800 Sobic009G087800 Sobic007G205800--Sobic009G087800 Sobic010G263800 Sobic010G263800 Sobic007G205800--Sobic010G263800 Sobic008G034600 Sobic008G034600 Sobic007G205800--Sobic008G034600 Sobic004G271900 Sobic004G271900 Sobic007G205800--Sobic004G271900 Sobic009G022200 Sobic009G022200 Sobic007G205800--Sobic009G022200 Sobic003G093600 Sobic003G093600 Sobic007G205800--Sobic003G093600 Sobic003G258400 Sobic003G258400 Sobic007G205800--Sobic003G258400 Sobic002G077200 Sobic002G077200 Sobic007G205800--Sobic002G077200 Sobic003G176600--Sobic006G273200 Sobic001G111900 Sobic001G111900 Sobic003G176600--Sobic001G111900 Sobic001G298600 Sobic001G298600 Sobic003G176600--Sobic001G298600 Sobic003G176600--Sobic001G253700 Sobic003G176600--Sobic007G132400 Sobic003G176600--Sobic008G062000 Sobic003G176600--Sobic008G067600 Sobic001G281600 Sobic001G281600 Sobic003G176600--Sobic001G281600 Sobic003G176600--Sobic002G310200
Octagon: transcription factors


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