Gene annotation
Transcriptome id Sobic.001G253700.1
Synonym APK2B, Sb01g022400
Functional annotation protein kinase domain containing protein, expressed
UniProt C5WM81
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF160
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04733; interleukin-1 receptor-associated kinase 4
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G02800 : protein kinase 2B
RAP-DB (Rice) LOC_Os10g26520.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007004
Brachypodium KQJ96629
Barley HORVU4Hr1G075150.2 , HORVU4Hr1G075150.3 , HORVU4Hr1G075150.4 , HORVU4Hr1G075150.5 , HORVU4Hr1G075150.6
Wheat TraesCS4D02G286100
Populus -


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cDNA sequences
Sobic.001G253700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
2 Sobic.001G000200 TBC domain containing protein, expressed -
3 Sobic.006G273200 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@protein kinase family protein, putative, expressed K14500: BR-signaling kinase
4 Sobic.003G176600 expressed protein -
5 Sobic.003G001000 - -
6 Sobic.004G119100 expressed protein -
7 Sobic.009G249200 transmembrane protein, putative, expressed -
8 Sobic.002G187801 - K03134: transcription initiation factor TFIID subunit 10
9 Sobic.007G190333 - -
10 Sobic.003G001100 Lg106, putative, expressed -
11 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
12 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
13 Sobic.007G026500 OsFBK21 - F-box domain and kelch repeat containing protein, expressed -
14 Sobic.001G497300 protein kinase domain containing protein, expressed -
15 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
16 Sobic.004G121100 expressed protein -
17 Sobic.007G104800 expressed protein -
18 Sobic.004G142900 - -
19 Sobic.007G007000 DUF250 domain containing protein, putative, expressed K15356: VRG4, GDP-mannose transporter
20 Sobic.002G310200 expressed protein -


Gene co-expression network
sample Sobic001G253700 Sobic001G253700 Sobic006G237400 Sobic006G237400 Sobic001G253700--Sobic006G237400 Sobic001G000200 Sobic001G000200 Sobic001G253700--Sobic001G000200 Sobic006G273200 Sobic006G273200 Sobic001G253700--Sobic006G273200 Sobic003G176600 Sobic003G176600 Sobic001G253700--Sobic003G176600 Sobic003G001000 Sobic003G001000 Sobic001G253700--Sobic003G001000 Sobic004G119100 Sobic004G119100 Sobic001G253700--Sobic004G119100 Sobic009G249200 Sobic009G249200 Sobic001G253700--Sobic009G249200 Sobic002G187801 Sobic002G187801 Sobic001G253700--Sobic002G187801 Sobic007G190333 Sobic007G190333 Sobic001G253700--Sobic007G190333 Sobic001G497300 Sobic001G497300 Sobic006G237400--Sobic001G497300 Sobic008G047800 Sobic008G047800 Sobic006G237400--Sobic008G047800 Sobic003G029700 Sobic003G029700 Sobic006G237400--Sobic003G029700 Sobic006G237400--Sobic009G249200 Sobic007G217000 Sobic007G217000 Sobic006G237400--Sobic007G217000 Sobic006G237400--Sobic001G253700 Sobic002G310200 Sobic002G310200 Sobic006G237400--Sobic002G310200 Sobic001G474600 Sobic001G474600 Sobic006G237400--Sobic001G474600 Sobic001G220300 Sobic001G220300 Sobic006G237400--Sobic001G220300 Sobic009G199200 Sobic009G199200 Sobic001G000200--Sobic009G199200 Sobic010G205800 Sobic010G205800 Sobic001G000200--Sobic010G205800 Sobic001G000200--Sobic006G237400 Sobic001G000200--Sobic001G253700 Sobic008G004600 Sobic008G004600 Sobic001G000200--Sobic008G004600 Sobic003G233600 Sobic003G233600 Sobic001G000200--Sobic003G233600 Sobic001G291000 Sobic001G291000 Sobic001G000200--Sobic001G291000 Sobic001G079200 Sobic001G079200 Sobic001G000200--Sobic001G079200 Sobic001G071400 Sobic001G071400 Sobic001G000200--Sobic001G071400 Sobic006G273200--Sobic001G497300 Sobic009G065100 Sobic009G065100 Sobic006G273200--Sobic009G065100 Sobic004G205600 Sobic004G205600 Sobic006G273200--Sobic004G205600 Sobic007G096000 Sobic007G096000 Sobic006G273200--Sobic007G096000 Sobic009G233300 Sobic009G233300 Sobic006G273200--Sobic009G233300 Sobic008G062000 Sobic008G062000 Sobic006G273200--Sobic008G062000 Sobic006G273200--Sobic006G237400 Sobic007G205800 Sobic007G205800 Sobic006G273200--Sobic007G205800 Sobic006G273200--Sobic003G176600 Sobic003G176600--Sobic006G273200 Sobic001G111900 Sobic001G111900 Sobic003G176600--Sobic001G111900 Sobic001G298600 Sobic001G298600 Sobic003G176600--Sobic001G298600 Sobic003G176600--Sobic001G253700 Sobic007G132400 Sobic007G132400 Sobic003G176600--Sobic007G132400 Sobic003G176600--Sobic008G062000 Sobic008G067600 Sobic008G067600 Sobic003G176600--Sobic008G067600 Sobic001G281600 Sobic001G281600 Sobic003G176600--Sobic001G281600 Sobic003G176600--Sobic002G310200 Sobic003G001100 Sobic003G001100 Sobic003G001000--Sobic003G001100 Sobic001G292200 Sobic001G292200 Sobic003G001000--Sobic001G292200 Sobic003G001000--Sobic001G253700 Sobic003G001000--Sobic007G190333 Sobic010G056200 Sobic010G056200 Sobic003G001000--Sobic010G056200 Sobic002G053000 Sobic002G053000 Sobic003G001000--Sobic002G053000 Sobic003G001000--Sobic003G176600 Sobic003G001000--Sobic006G273200 Sobic003G001000--Sobic006G237400 Sobic004G119100--Sobic001G253700 Sobic006G034000 Sobic006G034000 Sobic004G119100--Sobic006G034000 Sobic006G119800 Sobic006G119800 Sobic004G119100--Sobic006G119800 Sobic004G119100--Sobic003G233600 Sobic004G119100--Sobic001G000200 Sobic004G119100--Sobic010G205800 Sobic003G169600 Sobic003G169600 Sobic004G119100--Sobic003G169600 Sobic007G007000 Sobic007G007000 Sobic004G119100--Sobic007G007000 Sobic010G090900 Sobic010G090900 Sobic004G119100--Sobic010G090900 Sobic007G024700 Sobic007G024700 Sobic009G249200--Sobic007G024700 Sobic001G409600 Sobic001G409600 Sobic009G249200--Sobic001G409600 Sobic009G249200--Sobic006G237400 Sobic009G166300 Sobic009G166300 Sobic009G249200--Sobic009G166300 Sobic004G021100 Sobic004G021100 Sobic009G249200--Sobic004G021100 Sobic009G249200--Sobic010G205800 Sobic003G408500 Sobic003G408500 Sobic009G249200--Sobic003G408500 Sobic002G315200 Sobic002G315200 Sobic009G249200--Sobic002G315200 Sobic009G027300 Sobic009G027300 Sobic009G249200--Sobic009G027300 Sobic008G165700 Sobic008G165700 Sobic002G187801--Sobic008G165700 Sobic002G187801--Sobic001G253700 Sobic002G187801--Sobic009G233300 Sobic002G187801--Sobic006G273200 Sobic001G284800 Sobic001G284800 Sobic002G187801--Sobic001G284800 Sobic004G003501 Sobic004G003501 Sobic002G187801--Sobic004G003501 Sobic003G000150 Sobic003G000150 Sobic002G187801--Sobic003G000150 Sobic002G092300 Sobic002G092300 Sobic002G187801--Sobic002G092300 Sobic002G365100 Sobic002G365100 Sobic002G187801--Sobic002G365100 Sobic007G190333--Sobic003G001000 Sobic007G190333--Sobic001G253700 Sobic003G113200 Sobic003G113200 Sobic007G190333--Sobic003G113200 Sobic007G190333--Sobic010G056200 Sobic007G190333--Sobic003G176600 Sobic001G048766 Sobic001G048766 Sobic007G190333--Sobic001G048766 Sobic007G190333--Sobic001G292200 Sobic001G159400 Sobic001G159400 Sobic007G190333--Sobic001G159400 Sobic004G153400 Sobic004G153400 Sobic007G190333--Sobic004G153400
Octagon: transcription factors


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