Gene annotation
Transcriptome id Sobic.007G026500.1,Sobic.007G026500.2
Synonym Sb07g002320
Functional annotation OsFBK21 - F-box domain and kelch repeat containing protein, expressed
UniProt A0A1B6PFE1
Pfam PF00646 PF01344
Panther DB PTHR24414 PTHR24414:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G22040 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os10g21930.1,LOC_Os10g21930.2 : OsFBK21 - F-box domain and kelch repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a030204
Brachypodium -
Barley HORVU7Hr1G002140.2 , HORVU7Hr1G002140.3 , HORVU7Hr1G002140.1
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G026500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G093300 - -
2 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
3 Sobic.009G121100 expressed protein -
4 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
5 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
6 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
7 Sobic.002G340100 GTPase-activating protein, putative, expressed K12486: stromal membrane-associated protein
8 Sobic.001G154100 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
9 Sobic.001G253700 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
10 Sobic.006G114500 per1-like family protein, putative, expressed -
11 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
12 Sobic.001G507300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G543800 ethylene-responsive element-binding protein, putative, expressed -
14 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
15 Sobic.001G373200 lipase precursor, putative, expressed -
16 Sobic.008G191100 nodulin, putative, expressed -
17 Sobic.002G405900 zinc finger, RING-type, putative, expressed -
18 Sobic.009G135800 CUE domain containing protein, expressed -
19 Sobic.003G081100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsWAK2 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
20 Sobic.007G118600 mitochondrial carrier protein, putative, expressed K15119: solute carrier family 25, member 39/40


Gene co-expression network
sample Sobic007G026500 Sobic007G026500 Sobic003G093300 Sobic003G093300 Sobic007G026500--Sobic003G093300 Sobic004G295800 Sobic004G295800 Sobic007G026500--Sobic004G295800 Sobic009G121100 Sobic009G121100 Sobic007G026500--Sobic009G121100 Sobic004G021100 Sobic004G021100 Sobic007G026500--Sobic004G021100 Sobic003G407300 Sobic003G407300 Sobic007G026500--Sobic003G407300 Sobic004G052900 Sobic004G052900 Sobic007G026500--Sobic004G052900 Sobic002G340100 Sobic002G340100 Sobic007G026500--Sobic002G340100 Sobic001G154100 Sobic001G154100 Sobic007G026500--Sobic001G154100 Sobic001G253700 Sobic001G253700 Sobic007G026500--Sobic001G253700 Sobic003G093300--Sobic007G026500 Sobic003G093300--Sobic009G121100 Sobic003G093300--Sobic004G295800 Sobic008G191100 Sobic008G191100 Sobic003G093300--Sobic008G191100 Sobic004G153400 Sobic004G153400 Sobic003G093300--Sobic004G153400 Sobic006G138400 Sobic006G138400 Sobic003G093300--Sobic006G138400 Sobic006G214500 Sobic006G214500 Sobic003G093300--Sobic006G214500 Sobic001G373200 Sobic001G373200 Sobic003G093300--Sobic001G373200 Sobic003G093300--Sobic003G407300 Sobic004G295800--Sobic008G191100 Sobic002G132000 Sobic002G132000 Sobic004G295800--Sobic002G132000 Sobic007G024700 Sobic007G024700 Sobic004G295800--Sobic007G024700 Sobic004G295800--Sobic009G121100 Sobic004G006200 Sobic004G006200 Sobic004G295800--Sobic004G006200 Sobic004G295800--Sobic004G021100 Sobic004G295800--Sobic001G373200 Sobic004G295800--Sobic003G407300 Sobic001G290000 Sobic001G290000 Sobic004G295800--Sobic001G290000 Sobic009G121100--Sobic006G214500 Sobic009G121100--Sobic003G407300 Sobic003G019100 Sobic003G019100 Sobic009G121100--Sobic003G019100 Sobic001G156100 Sobic001G156100 Sobic009G121100--Sobic001G156100 Sobic001G443900 Sobic001G443900 Sobic009G121100--Sobic001G443900 Sobic009G121100--Sobic001G373200 Sobic010G078100 Sobic010G078100 Sobic009G121100--Sobic010G078100 Sobic009G121100--Sobic004G295800 Sobic002G303000 Sobic002G303000 Sobic009G121100--Sobic002G303000 Sobic009G056800 Sobic009G056800 Sobic004G021100--Sobic009G056800 Sobic007G026300 Sobic007G026300 Sobic004G021100--Sobic007G026300 Sobic001G512700 Sobic001G512700 Sobic004G021100--Sobic001G512700 Sobic006G173100 Sobic006G173100 Sobic004G021100--Sobic006G173100 Sobic007G104800 Sobic007G104800 Sobic004G021100--Sobic007G104800 Sobic004G274200 Sobic004G274200 Sobic004G021100--Sobic004G274200 Sobic004G205600 Sobic004G205600 Sobic004G021100--Sobic004G205600 Sobic003G187400 Sobic003G187400 Sobic004G021100--Sobic003G187400 Sobic007G118600 Sobic007G118600 Sobic004G021100--Sobic007G118600 Sobic003G407300--Sobic009G121100 Sobic003G407300--Sobic001G373200 Sobic003G407300--Sobic003G019100 Sobic003G407300--Sobic006G214500 Sobic001G507300 Sobic001G507300 Sobic003G407300--Sobic001G507300 Sobic003G407300--Sobic004G295800 Sobic009G229800 Sobic009G229800 Sobic003G407300--Sobic009G229800 Sobic003G407300--Sobic002G303000 Sobic003G407300--Sobic007G024700 Sobic003G109100 Sobic003G109100 Sobic004G052900--Sobic003G109100 Sobic004G052900--Sobic007G024700 Sobic003G100800 Sobic003G100800 Sobic004G052900--Sobic003G100800 Sobic007G172400 Sobic007G172400 Sobic004G052900--Sobic007G172400 Sobic004G052900--Sobic002G340100 Sobic002G419800 Sobic002G419800 Sobic004G052900--Sobic002G419800 Sobic006G245400 Sobic006G245400 Sobic004G052900--Sobic006G245400 Sobic001G248300 Sobic001G248300 Sobic004G052900--Sobic001G248300 Sobic009G094300 Sobic009G094300 Sobic004G052900--Sobic009G094300 Sobic001G292200 Sobic001G292200 Sobic002G340100--Sobic001G292200 Sobic001G071400 Sobic001G071400 Sobic002G340100--Sobic001G071400 Sobic002G340100--Sobic006G245400 Sobic002G315200 Sobic002G315200 Sobic002G340100--Sobic002G315200 Sobic009G135800 Sobic009G135800 Sobic002G340100--Sobic009G135800 Sobic001G114000 Sobic001G114000 Sobic002G340100--Sobic001G114000 Sobic007G217000 Sobic007G217000 Sobic002G340100--Sobic007G217000 Sobic002G340100--Sobic004G052900 Sobic001G474600 Sobic001G474600 Sobic002G340100--Sobic001G474600 Sobic001G154100--Sobic007G026500 Sobic001G154100--Sobic009G135800 Sobic001G111500 Sobic001G111500 Sobic001G154100--Sobic001G111500 Sobic001G111366 Sobic001G111366 Sobic001G154100--Sobic001G111366 Sobic004G006300 Sobic004G006300 Sobic001G154100--Sobic004G006300 Sobic001G154100--Sobic002G340100 Sobic003G145900 Sobic003G145900 Sobic001G154100--Sobic003G145900 Sobic009G178600 Sobic009G178600 Sobic001G154100--Sobic009G178600 Sobic002G417800 Sobic002G417800 Sobic001G154100--Sobic002G417800 Sobic006G237400 Sobic006G237400 Sobic001G253700--Sobic006G237400 Sobic001G000200 Sobic001G000200 Sobic001G253700--Sobic001G000200 Sobic006G273200 Sobic006G273200 Sobic001G253700--Sobic006G273200 Sobic003G176600 Sobic003G176600 Sobic001G253700--Sobic003G176600 Sobic003G001000 Sobic003G001000 Sobic001G253700--Sobic003G001000 Sobic004G119100 Sobic004G119100 Sobic001G253700--Sobic004G119100 Sobic009G249200 Sobic009G249200 Sobic001G253700--Sobic009G249200 Sobic002G187801 Sobic002G187801 Sobic001G253700--Sobic002G187801 Sobic007G190333 Sobic007G190333 Sobic001G253700--Sobic007G190333
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.