Gene annotation
Transcriptome id Sobic.003G407300.1,Sobic.003G407300.2
Synonym AHK3, HK3, Sb03g044230
Functional annotation histidine kinase, putative, expressed
UniProt A0A1B6Q7W2
Pfam PF00512 PF02518 PF00072 PF03924
Panther DB PTHR24423 PTHR24423:SF381
NCBI CDD KOG0519; Sensory transduction histidine kinase
KEGG Orthology K14489; arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
Gene Ontology GO:0007165; signal transduction GO:0000155phosphorelay sensor kinase activity GO:0000160phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT1G27320 : histidine kinase 3
RAP-DB (Rice) LOC_Os01g69920.1 : histidine kinase, putative, expressed
MaizeGDB (Corn) Zm00025a026238 , Zm00025a039278
Brachypodium KQK11271
Barley HORVU3Hr1G094870.9 , HORVU3Hr1G094870.8 , HORVU3Hr1G094870.1 , HORVU3Hr1G094870.3 , HORVU3Hr1G094870.2 , HORVU3Hr1G094870.4 , HORVU3Hr1G094870.7 , HORVU3Hr1G094870.6 , HORVU3Hr1G094870.11 , HORVU3Hr1G094870.10 , HORVU3Hr1G094870.12
Wheat TraesCS3A02G433200 , TraesCS3B02G469000 , TraesCS3D02G426600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G121100 expressed protein -
2 Sobic.001G373200 lipase precursor, putative, expressed -
3 Sobic.003G019100 KIN, antigenic determinant of recA protein, putative, expressed K13102: DNA/RNA-binding protein KIN17
4 Sobic.006G214500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lecithine cholesterol acyltransferase, putative, expressed -
5 Sobic.001G507300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
7 Sobic.009G229800 Uncharacterized gene family(PubMedID : 29126242)@"Causal gene for dw1, a putative membrane protein of unknown function"(PubMedID : 26963094)@expressed protein -
8 Sobic.002G303000 disease resistant protein, identical, putative, expressed -
9 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
10 Sobic.002G315200 DNA-binding bromodomain-containing protein, putative, expressed -
11 Sobic.002G179900 ABC transporter, ATP-binding protein, putative, expressed -
12 Sobic.009G249200 transmembrane protein, putative, expressed -
13 Sobic.006G138400 regulatory subunit, putative, expressed -
14 Sobic.007G026500 OsFBK21 - F-box domain and kelch repeat containing protein, expressed -
15 Sobic.001G543800 ethylene-responsive element-binding protein, putative, expressed -
16 Sobic.004G355000 SAC9, putative, expressed -
17 Sobic.001G290000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
18 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
19 Sobic.002G419800 structural constituent of ribosome, putative, expressed -
20 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase


Gene co-expression network
sample Sobic003G407300 Sobic003G407300 Sobic009G121100 Sobic009G121100 Sobic003G407300--Sobic009G121100 Sobic001G373200 Sobic001G373200 Sobic003G407300--Sobic001G373200 Sobic003G019100 Sobic003G019100 Sobic003G407300--Sobic003G019100 Sobic006G214500 Sobic006G214500 Sobic003G407300--Sobic006G214500 Sobic001G507300 Sobic001G507300 Sobic003G407300--Sobic001G507300 Sobic004G295800 Sobic004G295800 Sobic003G407300--Sobic004G295800 Sobic009G229800 Sobic009G229800 Sobic003G407300--Sobic009G229800 Sobic002G303000 Sobic002G303000 Sobic003G407300--Sobic002G303000 Sobic007G024700 Sobic007G024700 Sobic003G407300--Sobic007G024700 Sobic009G121100--Sobic006G214500 Sobic009G121100--Sobic003G407300 Sobic009G121100--Sobic003G019100 Sobic001G156100 Sobic001G156100 Sobic009G121100--Sobic001G156100 Sobic001G443900 Sobic001G443900 Sobic009G121100--Sobic001G443900 Sobic009G121100--Sobic001G373200 Sobic010G078100 Sobic010G078100 Sobic009G121100--Sobic010G078100 Sobic009G121100--Sobic004G295800 Sobic009G121100--Sobic002G303000 Sobic001G373200--Sobic003G407300 Sobic001G373200--Sobic009G121100 Sobic001G373200--Sobic003G019100 Sobic001G373200--Sobic004G295800 Sobic001G373200--Sobic007G024700 Sobic001G373200--Sobic006G214500 Sobic002G179900 Sobic002G179900 Sobic001G373200--Sobic002G179900 Sobic001G373200--Sobic001G156100 Sobic009G249200 Sobic009G249200 Sobic001G373200--Sobic009G249200 Sobic003G019100--Sobic009G121100 Sobic003G019100--Sobic001G373200 Sobic003G019100--Sobic003G407300 Sobic003G019100--Sobic004G295800 Sobic004G021100 Sobic004G021100 Sobic003G019100--Sobic004G021100 Sobic003G019100--Sobic006G214500 Sobic003G019100--Sobic009G249200 Sobic001G290000 Sobic001G290000 Sobic003G019100--Sobic001G290000 Sobic001G409600 Sobic001G409600 Sobic003G019100--Sobic001G409600 Sobic006G214500--Sobic009G121100 Sobic006G214500--Sobic001G443900 Sobic003G408500 Sobic003G408500 Sobic006G214500--Sobic003G408500 Sobic008G160700 Sobic008G160700 Sobic006G214500--Sobic008G160700 Sobic006G214500--Sobic010G078100 Sobic006G214500--Sobic001G156100 Sobic006G214500--Sobic003G407300 Sobic001G447500 Sobic001G447500 Sobic006G214500--Sobic001G447500 Sobic006G214500--Sobic009G249200 Sobic001G507300--Sobic003G407300 Sobic001G507300--Sobic004G295800 Sobic002G315200 Sobic002G315200 Sobic001G507300--Sobic002G315200 Sobic001G050200 Sobic001G050200 Sobic001G507300--Sobic001G050200 Sobic002G419800 Sobic002G419800 Sobic001G507300--Sobic002G419800 Sobic001G290100 Sobic001G290100 Sobic001G507300--Sobic001G290100 Sobic001G507300--Sobic001G373200 Sobic007G026500 Sobic007G026500 Sobic001G507300--Sobic007G026500 Sobic004G355000 Sobic004G355000 Sobic001G507300--Sobic004G355000 Sobic008G191100 Sobic008G191100 Sobic004G295800--Sobic008G191100 Sobic002G132000 Sobic002G132000 Sobic004G295800--Sobic002G132000 Sobic004G295800--Sobic007G024700 Sobic004G295800--Sobic009G121100 Sobic004G006200 Sobic004G006200 Sobic004G295800--Sobic004G006200 Sobic004G295800--Sobic004G021100 Sobic004G295800--Sobic001G373200 Sobic004G295800--Sobic003G407300 Sobic004G295800--Sobic001G290000 Sobic009G229800--Sobic003G407300 Sobic009G229800--Sobic001G156100 Sobic004G060900 Sobic004G060900 Sobic009G229800--Sobic004G060900 Sobic009G229800--Sobic001G373200 Sobic009G229800--Sobic009G121100 Sobic009G229800--Sobic001G443900 Sobic009G229800--Sobic002G419800 Sobic009G057300 Sobic009G057300 Sobic009G229800--Sobic009G057300 Sobic007G172400 Sobic007G172400 Sobic009G229800--Sobic007G172400 Sobic002G303000--Sobic010G078100 Sobic002G303000--Sobic009G121100 Sobic002G303000--Sobic008G160700 Sobic002G303000--Sobic003G407300 Sobic009G040700 Sobic009G040700 Sobic002G303000--Sobic009G040700 Sobic005G007800 Sobic005G007800 Sobic002G303000--Sobic005G007800 Sobic004G196700 Sobic004G196700 Sobic002G303000--Sobic004G196700 Sobic009G235900 Sobic009G235900 Sobic002G303000--Sobic009G235900 Sobic008G024600 Sobic008G024600 Sobic002G303000--Sobic008G024600 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic009G094300 Sobic009G094300 Sobic007G024700--Sobic009G094300 Sobic007G024700--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic003G305200 Sobic003G305200 Sobic007G024700--Sobic003G305200 Sobic007G024700--Sobic002G132000 Sobic007G024700--Sobic002G419800
Octagon: transcription factors


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