Gene annotation
Transcriptome id Sobic.004G295800.1
Synonym Sb04g032970, ATJ3, ATJ
Functional annotation chaperone protein dnaJ, putative, expressed
UniProt C5XRY7
Pfam PF00684 PF00226 PF01556
Panther DB PTHR24078 PTHR24078:SF210
NCBI CDD KOG0712; Molecular chaperone (DnaJ superfamily)
KEGG Orthology K09503; DnaJ homolog subfamily A member 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22060 : DNAJ homologue 2
RAP-DB (Rice) LOC_Os02g43930.1 : chaperone protein dnaJ, putative, expressed
MaizeGDB (Corn) Zm00025a020884
Brachypodium KQK00603
Barley HORVU0Hr1G018300.1 , HORVU0Hr1G018300.2 , HORVU0Hr1G018300.3
Wheat TraesCS6B02G274600 , TraesCS6A02G250800 , TraesCS6D02G232600
Populus -


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cDNA sequences
Sobic.004G295800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G191100 nodulin, putative, expressed -
2 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
3 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
4 Sobic.009G121100 expressed protein -
5 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
6 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
7 Sobic.001G373200 lipase precursor, putative, expressed -
8 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
9 Sobic.001G290000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
10 Sobic.007G026500 OsFBK21 - F-box domain and kelch repeat containing protein, expressed -
11 Sobic.003G305200 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed K01126: E3.1.4.46, glpQ, glycerophosphoryl diester phosphodiesterase
12 Sobic.007G118600 mitochondrial carrier protein, putative, expressed K15119: solute carrier family 25, member 39/40
13 Sobic.003G019100 KIN, antigenic determinant of recA protein, putative, expressed K13102: DNA/RNA-binding protein KIN17
14 Sobic.001G507300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.004G002400 expressed protein -
16 Sobic.001G114000 expressed protein -
17 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
18 Sobic.003G433100 MAC/Perforin domain containing protein, putative, expressed -
19 Sobic.001G427100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
20 Sobic.002G315200 DNA-binding bromodomain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G295800 Sobic004G295800 Sobic008G191100 Sobic008G191100 Sobic004G295800--Sobic008G191100 Sobic002G132000 Sobic002G132000 Sobic004G295800--Sobic002G132000 Sobic007G024700 Sobic007G024700 Sobic004G295800--Sobic007G024700 Sobic009G121100 Sobic009G121100 Sobic004G295800--Sobic009G121100 Sobic004G006200 Sobic004G006200 Sobic004G295800--Sobic004G006200 Sobic004G021100 Sobic004G021100 Sobic004G295800--Sobic004G021100 Sobic001G373200 Sobic001G373200 Sobic004G295800--Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic004G295800--Sobic003G407300 Sobic001G290000 Sobic001G290000 Sobic004G295800--Sobic001G290000 Sobic008G191100--Sobic004G295800 Sobic008G191100--Sobic001G290000 Sobic008G191100--Sobic002G132000 Sobic006G214500 Sobic006G214500 Sobic008G191100--Sobic006G214500 Sobic008G191100--Sobic001G373200 Sobic003G093300 Sobic003G093300 Sobic008G191100--Sobic003G093300 Sobic003G433100 Sobic003G433100 Sobic008G191100--Sobic003G433100 Sobic008G191100--Sobic007G024700 Sobic009G126900 Sobic009G126900 Sobic008G191100--Sobic009G126900 Sobic002G132000--Sobic004G006200 Sobic004G264400 Sobic004G264400 Sobic002G132000--Sobic004G264400 Sobic002G132000--Sobic007G024700 Sobic002G132000--Sobic004G295800 Sobic001G109800 Sobic001G109800 Sobic002G132000--Sobic001G109800 Sobic002G132000--Sobic001G290000 Sobic009G113000 Sobic009G113000 Sobic002G132000--Sobic009G113000 Sobic003G305200 Sobic003G305200 Sobic002G132000--Sobic003G305200 Sobic001G137100 Sobic001G137100 Sobic002G132000--Sobic001G137100 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic009G094300 Sobic009G094300 Sobic007G024700--Sobic009G094300 Sobic009G249200 Sobic009G249200 Sobic007G024700--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic007G024700--Sobic004G264400 Sobic007G024700--Sobic003G305200 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic009G121100--Sobic006G214500 Sobic009G121100--Sobic003G407300 Sobic003G019100 Sobic003G019100 Sobic009G121100--Sobic003G019100 Sobic001G156100 Sobic001G156100 Sobic009G121100--Sobic001G156100 Sobic001G443900 Sobic001G443900 Sobic009G121100--Sobic001G443900 Sobic009G121100--Sobic001G373200 Sobic010G078100 Sobic010G078100 Sobic009G121100--Sobic010G078100 Sobic009G121100--Sobic004G295800 Sobic002G303000 Sobic002G303000 Sobic009G121100--Sobic002G303000 Sobic004G006200--Sobic002G132000 Sobic004G006200--Sobic004G295800 Sobic004G006200--Sobic007G024700 Sobic007G062600 Sobic007G062600 Sobic004G006200--Sobic007G062600 Sobic004G006200--Sobic004G052900 Sobic004G006200--Sobic004G264400 Sobic002G424000 Sobic002G424000 Sobic004G006200--Sobic002G424000 Sobic001G199100 Sobic001G199100 Sobic004G006200--Sobic001G199100 Sobic003G012200 Sobic003G012200 Sobic004G006200--Sobic003G012200 Sobic009G056800 Sobic009G056800 Sobic004G021100--Sobic009G056800 Sobic007G026300 Sobic007G026300 Sobic004G021100--Sobic007G026300 Sobic001G512700 Sobic001G512700 Sobic004G021100--Sobic001G512700 Sobic006G173100 Sobic006G173100 Sobic004G021100--Sobic006G173100 Sobic007G104800 Sobic007G104800 Sobic004G021100--Sobic007G104800 Sobic004G274200 Sobic004G274200 Sobic004G021100--Sobic004G274200 Sobic004G205600 Sobic004G205600 Sobic004G021100--Sobic004G205600 Sobic003G187400 Sobic003G187400 Sobic004G021100--Sobic003G187400 Sobic007G118600 Sobic007G118600 Sobic004G021100--Sobic007G118600 Sobic001G373200--Sobic003G407300 Sobic001G373200--Sobic009G121100 Sobic001G373200--Sobic003G019100 Sobic001G373200--Sobic004G295800 Sobic001G373200--Sobic007G024700 Sobic001G373200--Sobic006G214500 Sobic002G179900 Sobic002G179900 Sobic001G373200--Sobic002G179900 Sobic001G373200--Sobic001G156100 Sobic001G373200--Sobic009G249200 Sobic003G407300--Sobic009G121100 Sobic003G407300--Sobic001G373200 Sobic003G407300--Sobic003G019100 Sobic003G407300--Sobic006G214500 Sobic001G507300 Sobic001G507300 Sobic003G407300--Sobic001G507300 Sobic003G407300--Sobic004G295800 Sobic009G229800 Sobic009G229800 Sobic003G407300--Sobic009G229800 Sobic003G407300--Sobic002G303000 Sobic003G407300--Sobic007G024700 Sobic001G224600 Sobic001G224600 Sobic001G290000--Sobic001G224600 Sobic001G290000--Sobic007G024700 Sobic001G290000--Sobic002G132000 Sobic001G290000--Sobic004G295800 Sobic001G290000--Sobic008G191100 Sobic001G290000--Sobic004G264400 Sobic001G290000--Sobic002G419800 Sobic001G290000--Sobic001G137100 Sobic001G290000--Sobic009G249200
Octagon: transcription factors


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