Gene annotation
Transcriptome id Sobic.008G191100.1
Synonym Sb08g023130
Functional annotation nodulin, putative, expressed
UniProt C5YT29
Pfam PF07690 PF06813
Panther DB PTHR21576 PTHR21576:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G74780 : Nodulin-like / Major Facilitator Superfamily protein
RAP-DB (Rice) LOC_Os12g44180.1 : nodulin, putative, expressed
MaizeGDB (Corn) Zm00025a025064
Brachypodium KQJ85597
Barley HORVU1Hr1G019710.1 , HORVU5Hr1G000630.5
Wheat TraesCS5B02G003600 , TraesCS5A02G003400 , TraesCS5D02G004600
Populus -


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cDNA sequences
Sobic.008G191100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
2 Sobic.001G290000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
3 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
4 Sobic.006G214500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lecithine cholesterol acyltransferase, putative, expressed -
5 Sobic.001G373200 lipase precursor, putative, expressed -
6 Sobic.003G093300 - -
7 Sobic.003G433100 MAC/Perforin domain containing protein, putative, expressed -
8 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
9 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
10 Sobic.003G305200 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed K01126: E3.1.4.46, glpQ, glycerophosphoryl diester phosphodiesterase
11 Sobic.003G019100 KIN, antigenic determinant of recA protein, putative, expressed K13102: DNA/RNA-binding protein KIN17
12 Sobic.009G121100 expressed protein -
13 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
14 Sobic.001G156100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aminotransferase, putative, expressed K00819: rocD, ornithine--oxo-acid transaminase
15 Sobic.007G026500 OsFBK21 - F-box domain and kelch repeat containing protein, expressed -
16 Sobic.001G507300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.010G078100 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
18 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
19 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
20 Sobic.002G009700 AMP-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic008G191100 Sobic008G191100 Sobic004G295800 Sobic004G295800 Sobic008G191100--Sobic004G295800 Sobic001G290000 Sobic001G290000 Sobic008G191100--Sobic001G290000 Sobic002G132000 Sobic002G132000 Sobic008G191100--Sobic002G132000 Sobic006G214500 Sobic006G214500 Sobic008G191100--Sobic006G214500 Sobic001G373200 Sobic001G373200 Sobic008G191100--Sobic001G373200 Sobic003G093300 Sobic003G093300 Sobic008G191100--Sobic003G093300 Sobic003G433100 Sobic003G433100 Sobic008G191100--Sobic003G433100 Sobic007G024700 Sobic007G024700 Sobic008G191100--Sobic007G024700 Sobic009G126900 Sobic009G126900 Sobic008G191100--Sobic009G126900 Sobic004G295800--Sobic008G191100 Sobic004G295800--Sobic002G132000 Sobic004G295800--Sobic007G024700 Sobic009G121100 Sobic009G121100 Sobic004G295800--Sobic009G121100 Sobic004G006200 Sobic004G006200 Sobic004G295800--Sobic004G006200 Sobic004G021100 Sobic004G021100 Sobic004G295800--Sobic004G021100 Sobic004G295800--Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic004G295800--Sobic003G407300 Sobic004G295800--Sobic001G290000 Sobic001G224600 Sobic001G224600 Sobic001G290000--Sobic001G224600 Sobic001G290000--Sobic007G024700 Sobic001G290000--Sobic002G132000 Sobic001G290000--Sobic004G295800 Sobic001G290000--Sobic008G191100 Sobic004G264400 Sobic004G264400 Sobic001G290000--Sobic004G264400 Sobic002G419800 Sobic002G419800 Sobic001G290000--Sobic002G419800 Sobic001G137100 Sobic001G137100 Sobic001G290000--Sobic001G137100 Sobic009G249200 Sobic009G249200 Sobic001G290000--Sobic009G249200 Sobic002G132000--Sobic004G006200 Sobic002G132000--Sobic004G264400 Sobic002G132000--Sobic007G024700 Sobic002G132000--Sobic004G295800 Sobic001G109800 Sobic001G109800 Sobic002G132000--Sobic001G109800 Sobic002G132000--Sobic001G290000 Sobic009G113000 Sobic009G113000 Sobic002G132000--Sobic009G113000 Sobic003G305200 Sobic003G305200 Sobic002G132000--Sobic003G305200 Sobic002G132000--Sobic001G137100 Sobic006G214500--Sobic009G121100 Sobic001G443900 Sobic001G443900 Sobic006G214500--Sobic001G443900 Sobic003G408500 Sobic003G408500 Sobic006G214500--Sobic003G408500 Sobic008G160700 Sobic008G160700 Sobic006G214500--Sobic008G160700 Sobic010G078100 Sobic010G078100 Sobic006G214500--Sobic010G078100 Sobic001G156100 Sobic001G156100 Sobic006G214500--Sobic001G156100 Sobic006G214500--Sobic003G407300 Sobic001G447500 Sobic001G447500 Sobic006G214500--Sobic001G447500 Sobic006G214500--Sobic009G249200 Sobic001G373200--Sobic003G407300 Sobic001G373200--Sobic009G121100 Sobic003G019100 Sobic003G019100 Sobic001G373200--Sobic003G019100 Sobic001G373200--Sobic004G295800 Sobic001G373200--Sobic007G024700 Sobic001G373200--Sobic006G214500 Sobic002G179900 Sobic002G179900 Sobic001G373200--Sobic002G179900 Sobic001G373200--Sobic001G156100 Sobic001G373200--Sobic009G249200 Sobic007G026500 Sobic007G026500 Sobic003G093300--Sobic007G026500 Sobic003G093300--Sobic009G121100 Sobic003G093300--Sobic004G295800 Sobic003G093300--Sobic008G191100 Sobic004G153400 Sobic004G153400 Sobic003G093300--Sobic004G153400 Sobic006G138400 Sobic006G138400 Sobic003G093300--Sobic006G138400 Sobic003G093300--Sobic006G214500 Sobic003G093300--Sobic001G373200 Sobic003G093300--Sobic003G407300 Sobic009G193400 Sobic009G193400 Sobic003G433100--Sobic009G193400 Sobic001G478300 Sobic001G478300 Sobic003G433100--Sobic001G478300 Sobic007G062600 Sobic007G062600 Sobic003G433100--Sobic007G062600 Sobic003G433100--Sobic004G295800 Sobic003G433100--Sobic004G006200 Sobic009G154800 Sobic009G154800 Sobic003G433100--Sobic009G154800 Sobic009G228700 Sobic009G228700 Sobic003G433100--Sobic009G228700 Sobic002G424000 Sobic002G424000 Sobic003G433100--Sobic002G424000 Sobic003G433100--Sobic004G021100 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic009G094300 Sobic009G094300 Sobic007G024700--Sobic009G094300 Sobic007G024700--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic007G024700--Sobic004G264400 Sobic007G024700--Sobic003G305200 Sobic007G024700--Sobic002G132000 Sobic007G024700--Sobic002G419800 Sobic010G043400 Sobic010G043400 Sobic009G126900--Sobic010G043400 Sobic009G126900--Sobic002G270500 Sobic002G009700 Sobic002G009700 Sobic009G126900--Sobic002G009700 Sobic006G271200 Sobic006G271200 Sobic009G126900--Sobic006G271200 Sobic001G003000 Sobic001G003000 Sobic009G126900--Sobic001G003000 Sobic004G124200 Sobic004G124200 Sobic009G126900--Sobic004G124200 Sobic003G005600 Sobic003G005600 Sobic009G126900--Sobic003G005600 Sobic003G329400 Sobic003G329400 Sobic009G126900--Sobic003G329400 Sobic004G101900 Sobic004G101900 Sobic009G126900--Sobic004G101900
Octagon: transcription factors


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