Gene annotation
Transcriptome id Sobic.003G433100.1
Synonym Sb03g046450
Functional annotation MAC/Perforin domain containing protein, putative, expressed
UniProt C5XIK5
Pfam PF01823
Panther DB PTHR33199 PTHR33199:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24290 : MAC/Perforin domain-containing protein
RAP-DB (Rice) LOC_Os07g07194.1 : MAC/Perforin domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a039085
Brachypodium KQK11684 , KQK11683
Barley HORVU7Hr1G087270.2 , HORVU7Hr1G087270.1 , HORVU3Hr1G112370.3 , HORVU3Hr1G112370.2 , HORVU3Hr1G112370.1
Wheat TraesCS3D02G519000 , TraesCS3B02G579400 , TraesCS3A02G511700
Populus PNT42982 , PNT42979 , PNT42981 , PNT42980


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
2 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
3 Sobic.007G062600 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
4 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
5 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
6 Sobic.009G154800 syntaxin 6, N-terminal domain containing protein, expressed -
7 Sobic.009G228700 expressed protein -
8 Sobic.002G424000 transcription factor, putative, expressed K14431: transcription factor TGA
9 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
10 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
11 Sobic.009G056800 growth inhibition and differentiation-related protein 88, putative, expressed -
12 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
13 Sobic.008G191100 nodulin, putative, expressed -
14 Sobic.007G104800 expressed protein -
15 Sobic.001G035500 expressed protein -
16 Sobic.001G351700 calmodulin-binding transcription activator, putative, expressed -
17 Sobic.003G248200 NLI interacting factor-like phosphatase, putative, expressed -
18 Sobic.002G010300 photoperiodic flowering time gene(PubMedID : 22394582)@casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
19 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
20 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta


Gene co-expression network
sample Sobic003G433100 Sobic003G433100 Sobic009G193400 Sobic009G193400 Sobic003G433100--Sobic009G193400 Sobic001G478300 Sobic001G478300 Sobic003G433100--Sobic001G478300 Sobic007G062600 Sobic007G062600 Sobic003G433100--Sobic007G062600 Sobic004G295800 Sobic004G295800 Sobic003G433100--Sobic004G295800 Sobic004G006200 Sobic004G006200 Sobic003G433100--Sobic004G006200 Sobic009G154800 Sobic009G154800 Sobic003G433100--Sobic009G154800 Sobic009G228700 Sobic009G228700 Sobic003G433100--Sobic009G228700 Sobic002G424000 Sobic002G424000 Sobic003G433100--Sobic002G424000 Sobic004G021100 Sobic004G021100 Sobic003G433100--Sobic004G021100 Sobic003G007500 Sobic003G007500 Sobic009G193400--Sobic003G007500 Sobic009G193400--Sobic003G433100 Sobic009G171700 Sobic009G171700 Sobic009G193400--Sobic009G171700 Sobic008G180900 Sobic008G180900 Sobic009G193400--Sobic008G180900 Sobic003G295400 Sobic003G295400 Sobic009G193400--Sobic003G295400 Sobic004G104900 Sobic004G104900 Sobic009G193400--Sobic004G104900 Sobic009G193400--Sobic001G478300 Sobic002G413000 Sobic002G413000 Sobic009G193400--Sobic002G413000 Sobic010G083700 Sobic010G083700 Sobic009G193400--Sobic010G083700 Sobic004G231400 Sobic004G231400 Sobic001G478300--Sobic004G231400 Sobic010G071200 Sobic010G071200 Sobic001G478300--Sobic010G071200 Sobic006G209500 Sobic006G209500 Sobic001G478300--Sobic006G209500 Sobic001G427800 Sobic001G427800 Sobic001G478300--Sobic001G427800 Sobic001G149700 Sobic001G149700 Sobic001G478300--Sobic001G149700 Sobic010G055500 Sobic010G055500 Sobic001G478300--Sobic010G055500 Sobic004G263900 Sobic004G263900 Sobic001G478300--Sobic004G263900 Sobic003G273100 Sobic003G273100 Sobic001G478300--Sobic003G273100 Sobic004G274700 Sobic004G274700 Sobic001G478300--Sobic004G274700 Sobic007G062600--Sobic004G006200 Sobic007G062600--Sobic003G433100 Sobic009G207000 Sobic009G207000 Sobic007G062600--Sobic009G207000 Sobic003G063000 Sobic003G063000 Sobic007G062600--Sobic003G063000 Sobic007G062600--Sobic009G228700 Sobic006G249700 Sobic006G249700 Sobic007G062600--Sobic006G249700 Sobic007G062600--Sobic009G154800 Sobic009G259400 Sobic009G259400 Sobic007G062600--Sobic009G259400 Sobic007G062600--Sobic004G104900 Sobic008G191100 Sobic008G191100 Sobic004G295800--Sobic008G191100 Sobic002G132000 Sobic002G132000 Sobic004G295800--Sobic002G132000 Sobic007G024700 Sobic007G024700 Sobic004G295800--Sobic007G024700 Sobic009G121100 Sobic009G121100 Sobic004G295800--Sobic009G121100 Sobic004G295800--Sobic004G006200 Sobic004G295800--Sobic004G021100 Sobic001G373200 Sobic001G373200 Sobic004G295800--Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic004G295800--Sobic003G407300 Sobic001G290000 Sobic001G290000 Sobic004G295800--Sobic001G290000 Sobic004G006200--Sobic002G132000 Sobic004G006200--Sobic004G295800 Sobic004G006200--Sobic007G024700 Sobic004G006200--Sobic007G062600 Sobic004G052900 Sobic004G052900 Sobic004G006200--Sobic004G052900 Sobic004G264400 Sobic004G264400 Sobic004G006200--Sobic004G264400 Sobic004G006200--Sobic002G424000 Sobic001G199100 Sobic001G199100 Sobic004G006200--Sobic001G199100 Sobic003G012200 Sobic003G012200 Sobic004G006200--Sobic003G012200 Sobic009G154800--Sobic003G433100 Sobic009G154800--Sobic003G007500 Sobic001G051200 Sobic001G051200 Sobic009G154800--Sobic001G051200 Sobic001G371200 Sobic001G371200 Sobic009G154800--Sobic001G371200 Sobic009G154800--Sobic001G478300 Sobic004G350100 Sobic004G350100 Sobic009G154800--Sobic004G350100 Sobic009G056800 Sobic009G056800 Sobic009G154800--Sobic009G056800 Sobic009G154800--Sobic006G209500 Sobic010G058500 Sobic010G058500 Sobic009G154800--Sobic010G058500 Sobic004G066200 Sobic004G066200 Sobic009G228700--Sobic004G066200 Sobic009G228700--Sobic009G207000 Sobic001G091300 Sobic001G091300 Sobic009G228700--Sobic001G091300 Sobic001G323000 Sobic001G323000 Sobic009G228700--Sobic001G323000 Sobic001G356600 Sobic001G356600 Sobic009G228700--Sobic001G356600 Sobic009G228700--Sobic006G249700 Sobic006G148200 Sobic006G148200 Sobic009G228700--Sobic006G148200 Sobic003G312200 Sobic003G312200 Sobic009G228700--Sobic003G312200 Sobic001G124200 Sobic001G124200 Sobic009G228700--Sobic001G124200 Sobic002G424000--Sobic004G006200 Sobic002G424000--Sobic003G433100 Sobic002G424000--Sobic007G024700 Sobic002G424000--Sobic009G207000 Sobic003G352600 Sobic003G352600 Sobic002G424000--Sobic003G352600 Sobic001G137100 Sobic001G137100 Sobic002G424000--Sobic001G137100 Sobic002G130800 Sobic002G130800 Sobic002G424000--Sobic002G130800 Sobic002G424000--Sobic002G132000 Sobic001G390800 Sobic001G390800 Sobic002G424000--Sobic001G390800 Sobic004G021100--Sobic009G056800 Sobic007G026300 Sobic007G026300 Sobic004G021100--Sobic007G026300 Sobic001G512700 Sobic001G512700 Sobic004G021100--Sobic001G512700 Sobic006G173100 Sobic006G173100 Sobic004G021100--Sobic006G173100 Sobic007G104800 Sobic007G104800 Sobic004G021100--Sobic007G104800 Sobic004G274200 Sobic004G274200 Sobic004G021100--Sobic004G274200 Sobic004G205600 Sobic004G205600 Sobic004G021100--Sobic004G205600 Sobic003G187400 Sobic003G187400 Sobic004G021100--Sobic003G187400 Sobic007G118600 Sobic007G118600 Sobic004G021100--Sobic007G118600
Octagon: transcription factors


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