Gene annotation
Transcriptome id Sobic.001G351700.1,Sobic.001G351700.2
Synonym EICBP.B, CAMTA1, Sb01g033650
Functional annotation calmodulin-binding transcription activator, putative, expressed
UniProt C5WXQ8 , A0A1B6QMV3
Pfam PF00612 PF01833 PF03859
Panther DB PTHR23335 PTHR23335:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0005634nucleus GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G09410 : ethylene induced calmodulin binding protein
RAP-DB (Rice) LOC_Os07g43030.1 : calmodulin-binding transcription activator, putative, expressed
MaizeGDB (Corn) Zm00025a006357 , Zm00025a049290 , Zm00025a048796 , Zm00025a017605 , Zm00025a052095 , Zm00025a053912 , Zm00025a024958 , Zm00025a007598
Brachypodium KQK21448
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G134600 agenet domain containing protein, expressed -
2 Sobic.004G267300 bg55, putative, expressed -
3 Sobic.001G290200 leucine rich repeat containing protein, expressed -
4 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
5 Sobic.009G056800 growth inhibition and differentiation-related protein 88, putative, expressed -
6 Sobic.001G306000 protein kinase, putative, expressed -
7 Sobic.003G433100 MAC/Perforin domain containing protein, putative, expressed -
8 Sobic.009G172400 VHS and GAT domain containing protein, expressed -
9 Sobic.001G371200 SAC3/GANP family protein, putative, expressed -
10 Sobic.003G081100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsWAK2 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
11 Sobic.007G104800 expressed protein -
12 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
13 Sobic.009G137800 expressed protein -
14 Sobic.008G189400 NBS-LRR disease resistance protein, putative, expressed -
15 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
16 Sobic.009G154800 syntaxin 6, N-terminal domain containing protein, expressed -
17 Sobic.003G333600 OsFBX29 - F-box domain containing protein, expressed -
18 Sobic.001G421300 protein kinase APK1A, chloroplast precursor, putative, expressed -
19 Sobic.002G405900 zinc finger, RING-type, putative, expressed -
20 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2


Gene co-expression network
sample Sobic001G351700 Sobic001G351700 Sobic007G134600 Sobic007G134600 Sobic001G351700--Sobic007G134600 Sobic004G267300 Sobic004G267300 Sobic001G351700--Sobic004G267300 Sobic001G290200 Sobic001G290200 Sobic001G351700--Sobic001G290200 Sobic004G021100 Sobic004G021100 Sobic001G351700--Sobic004G021100 Sobic009G056800 Sobic009G056800 Sobic001G351700--Sobic009G056800 Sobic001G306000 Sobic001G306000 Sobic001G351700--Sobic001G306000 Sobic003G433100 Sobic003G433100 Sobic001G351700--Sobic003G433100 Sobic009G172400 Sobic009G172400 Sobic001G351700--Sobic009G172400 Sobic001G371200 Sobic001G371200 Sobic001G351700--Sobic001G371200 Sobic002G310200 Sobic002G310200 Sobic007G134600--Sobic002G310200 Sobic009G215800 Sobic009G215800 Sobic007G134600--Sobic009G215800 Sobic006G237400 Sobic006G237400 Sobic007G134600--Sobic006G237400 Sobic010G056000 Sobic010G056000 Sobic007G134600--Sobic010G056000 Sobic007G134600--Sobic001G351700 Sobic001G222500 Sobic001G222500 Sobic007G134600--Sobic001G222500 Sobic002G157300 Sobic002G157300 Sobic007G134600--Sobic002G157300 Sobic006G273200 Sobic006G273200 Sobic007G134600--Sobic006G273200 Sobic008G067600 Sobic008G067600 Sobic007G134600--Sobic008G067600 Sobic009G137800 Sobic009G137800 Sobic004G267300--Sobic009G137800 Sobic004G267300--Sobic007G134600 Sobic008G025900 Sobic008G025900 Sobic004G267300--Sobic008G025900 Sobic003G056100 Sobic003G056100 Sobic004G267300--Sobic003G056100 Sobic004G267300--Sobic001G351700 Sobic004G267300--Sobic009G172400 Sobic002G324200 Sobic002G324200 Sobic004G267300--Sobic002G324200 Sobic004G267300--Sobic010G056000 Sobic004G132150 Sobic004G132150 Sobic004G267300--Sobic004G132150 Sobic001G290200--Sobic009G137800 Sobic003G119800 Sobic003G119800 Sobic001G290200--Sobic003G119800 Sobic005G046100 Sobic005G046100 Sobic001G290200--Sobic005G046100 Sobic001G290200--Sobic001G351700 Sobic001G290200--Sobic008G025900 Sobic010G260500 Sobic010G260500 Sobic001G290200--Sobic010G260500 Sobic001G290200--Sobic002G324200 Sobic003G081100 Sobic003G081100 Sobic001G290200--Sobic003G081100 Sobic005G167300 Sobic005G167300 Sobic001G290200--Sobic005G167300 Sobic004G021100--Sobic009G056800 Sobic007G026300 Sobic007G026300 Sobic004G021100--Sobic007G026300 Sobic001G512700 Sobic001G512700 Sobic004G021100--Sobic001G512700 Sobic006G173100 Sobic006G173100 Sobic004G021100--Sobic006G173100 Sobic007G104800 Sobic007G104800 Sobic004G021100--Sobic007G104800 Sobic004G274200 Sobic004G274200 Sobic004G021100--Sobic004G274200 Sobic004G205600 Sobic004G205600 Sobic004G021100--Sobic004G205600 Sobic003G187400 Sobic003G187400 Sobic004G021100--Sobic003G187400 Sobic007G118600 Sobic007G118600 Sobic004G021100--Sobic007G118600 Sobic009G056800--Sobic004G021100 Sobic009G056800--Sobic006G173100 Sobic004G350100 Sobic004G350100 Sobic009G056800--Sobic004G350100 Sobic002G388200 Sobic002G388200 Sobic009G056800--Sobic002G388200 Sobic003G081000 Sobic003G081000 Sobic009G056800--Sobic003G081000 Sobic009G056800--Sobic001G512700 Sobic009G056800--Sobic002G157300 Sobic007G118200 Sobic007G118200 Sobic009G056800--Sobic007G118200 Sobic009G056800--Sobic007G104800 Sobic009G183200 Sobic009G183200 Sobic001G306000--Sobic009G183200 Sobic001G446900 Sobic001G446900 Sobic001G306000--Sobic001G446900 Sobic001G497300 Sobic001G497300 Sobic001G306000--Sobic001G497300 Sobic007G078000 Sobic007G078000 Sobic001G306000--Sobic007G078000 Sobic007G205800 Sobic007G205800 Sobic001G306000--Sobic007G205800 Sobic001G420200 Sobic001G420200 Sobic001G306000--Sobic001G420200 Sobic001G486300 Sobic001G486300 Sobic001G306000--Sobic001G486300 Sobic003G333600 Sobic003G333600 Sobic001G306000--Sobic003G333600 Sobic001G306000--Sobic007G104800 Sobic009G193400 Sobic009G193400 Sobic003G433100--Sobic009G193400 Sobic001G478300 Sobic001G478300 Sobic003G433100--Sobic001G478300 Sobic007G062600 Sobic007G062600 Sobic003G433100--Sobic007G062600 Sobic004G295800 Sobic004G295800 Sobic003G433100--Sobic004G295800 Sobic004G006200 Sobic004G006200 Sobic003G433100--Sobic004G006200 Sobic009G154800 Sobic009G154800 Sobic003G433100--Sobic009G154800 Sobic009G228700 Sobic009G228700 Sobic003G433100--Sobic009G228700 Sobic002G424000 Sobic002G424000 Sobic003G433100--Sobic002G424000 Sobic003G433100--Sobic004G021100 Sobic009G172400--Sobic003G333600 Sobic009G249200 Sobic009G249200 Sobic009G172400--Sobic009G249200 Sobic005G105000 Sobic005G105000 Sobic009G172400--Sobic005G105000 Sobic009G138100 Sobic009G138100 Sobic009G172400--Sobic009G138100 Sobic009G172400--Sobic004G267300 Sobic003G408500 Sobic003G408500 Sobic009G172400--Sobic003G408500 Sobic009G172400--Sobic004G205600 Sobic009G172400--Sobic001G351700 Sobic010G145900 Sobic010G145900 Sobic009G172400--Sobic010G145900 Sobic001G371200--Sobic007G118200 Sobic002G313500 Sobic002G313500 Sobic001G371200--Sobic002G313500 Sobic001G466700 Sobic001G466700 Sobic001G371200--Sobic001G466700 Sobic006G252700 Sobic006G252700 Sobic001G371200--Sobic006G252700 Sobic006G278700 Sobic006G278700 Sobic001G371200--Sobic006G278700 Sobic002G378200 Sobic002G378200 Sobic001G371200--Sobic002G378200 Sobic007G200600 Sobic007G200600 Sobic001G371200--Sobic007G200600 Sobic001G371200--Sobic003G081000 Sobic004G283000 Sobic004G283000 Sobic001G371200--Sobic004G283000
Octagon: transcription factors


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