Gene annotation
Transcriptome id Sobic.004G267300.1
Synonym Sb04g030520
Functional annotation bg55, putative, expressed
UniProt C5Y0B2
Pfam PF05804 PF04564
Panther DB PTHR22849 PTHR22849:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT1G24330 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os02g47670.2 : bg55, putative, expressed
MaizeGDB (Corn) Zm00025a021726
Brachypodium KQK00944 , KQK00945
Barley HORVU6Hr1G069010.2 , HORVU6Hr1G069010.3 , HORVU6Hr1G069010.1 , HORVU6Hr1G069010.6 , HORVU6Hr1G069010.7 , HORVU6Hr1G069010.4 , HORVU6Hr1G069010.5 , HORVU6Hr1G069010.8
Wheat TraesCS6A02G273100 , TraesCS6B02G300500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G137800 expressed protein -
2 Sobic.007G134600 agenet domain containing protein, expressed -
3 Sobic.008G025900 expressed protein -
4 Sobic.003G056100 transcription initiation factor, putative, expressed K03129: transcription initiation factor TFIID subunit 4
5 Sobic.001G351700 calmodulin-binding transcription activator, putative, expressed -
6 Sobic.009G172400 VHS and GAT domain containing protein, expressed -
7 Sobic.002G324200 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
8 Sobic.010G056000 GAGA-binding protein, putative, expressed -
9 Sobic.004G132150 - -
10 Sobic.006G051700 WRKY123, expressed -
11 Sobic.001G111900 - -
12 Sobic.003G333600 OsFBX29 - F-box domain containing protein, expressed -
13 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
14 Sobic.006G258500 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
15 Sobic.003G278500 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
16 Sobic.003G087400 - -
17 Sobic.003G377800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
18 Sobic.002G405900 zinc finger, RING-type, putative, expressed -
19 Sobic.005G105000 STE_MEKK_ste11_MAP3K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
20 Sobic.004G205600 bromodomain domain containing protein, expressed -


Gene co-expression network
sample Sobic004G267300 Sobic004G267300 Sobic009G137800 Sobic009G137800 Sobic004G267300--Sobic009G137800 Sobic007G134600 Sobic007G134600 Sobic004G267300--Sobic007G134600 Sobic008G025900 Sobic008G025900 Sobic004G267300--Sobic008G025900 Sobic003G056100 Sobic003G056100 Sobic004G267300--Sobic003G056100 Sobic001G351700 Sobic001G351700 Sobic004G267300--Sobic001G351700 Sobic009G172400 Sobic009G172400 Sobic004G267300--Sobic009G172400 Sobic002G324200 Sobic002G324200 Sobic004G267300--Sobic002G324200 Sobic010G056000 Sobic010G056000 Sobic004G267300--Sobic010G056000 Sobic004G132150 Sobic004G132150 Sobic004G267300--Sobic004G132150 Sobic004G153600 Sobic004G153600 Sobic009G137800--Sobic004G153600 Sobic008G189400 Sobic008G189400 Sobic009G137800--Sobic008G189400 Sobic009G137800--Sobic004G267300 Sobic003G185200 Sobic003G185200 Sobic009G137800--Sobic003G185200 Sobic009G137800--Sobic008G025900 Sobic001G424700 Sobic001G424700 Sobic009G137800--Sobic001G424700 Sobic009G087800 Sobic009G087800 Sobic009G137800--Sobic009G087800 Sobic001G022100 Sobic001G022100 Sobic009G137800--Sobic001G022100 Sobic010G260500 Sobic010G260500 Sobic009G137800--Sobic010G260500 Sobic002G310200 Sobic002G310200 Sobic007G134600--Sobic002G310200 Sobic009G215800 Sobic009G215800 Sobic007G134600--Sobic009G215800 Sobic006G237400 Sobic006G237400 Sobic007G134600--Sobic006G237400 Sobic007G134600--Sobic010G056000 Sobic007G134600--Sobic001G351700 Sobic001G222500 Sobic001G222500 Sobic007G134600--Sobic001G222500 Sobic002G157300 Sobic002G157300 Sobic007G134600--Sobic002G157300 Sobic006G273200 Sobic006G273200 Sobic007G134600--Sobic006G273200 Sobic008G067600 Sobic008G067600 Sobic007G134600--Sobic008G067600 Sobic002G224450 Sobic002G224450 Sobic008G025900--Sobic002G224450 Sobic005G139800 Sobic005G139800 Sobic008G025900--Sobic005G139800 Sobic004G121000 Sobic004G121000 Sobic008G025900--Sobic004G121000 Sobic005G221425 Sobic005G221425 Sobic008G025900--Sobic005G221425 Sobic009G209800 Sobic009G209800 Sobic008G025900--Sobic009G209800 Sobic001G240400 Sobic001G240400 Sobic008G025900--Sobic001G240400 Sobic009G157500 Sobic009G157500 Sobic008G025900--Sobic009G157500 Sobic005G110427 Sobic005G110427 Sobic008G025900--Sobic005G110427 Sobic008G049701 Sobic008G049701 Sobic008G025900--Sobic008G049701 Sobic001G125200 Sobic001G125200 Sobic003G056100--Sobic001G125200 Sobic002G006900 Sobic002G006900 Sobic003G056100--Sobic002G006900 Sobic003G056100--Sobic008G067600 Sobic001G512700 Sobic001G512700 Sobic003G056100--Sobic001G512700 Sobic001G497300 Sobic001G497300 Sobic003G056100--Sobic001G497300 Sobic002G315200 Sobic002G315200 Sobic003G056100--Sobic002G315200 Sobic009G104201 Sobic009G104201 Sobic003G056100--Sobic009G104201 Sobic003G087400 Sobic003G087400 Sobic003G056100--Sobic003G087400 Sobic007G217000 Sobic007G217000 Sobic003G056100--Sobic007G217000 Sobic001G351700--Sobic007G134600 Sobic001G351700--Sobic004G267300 Sobic001G290200 Sobic001G290200 Sobic001G351700--Sobic001G290200 Sobic004G021100 Sobic004G021100 Sobic001G351700--Sobic004G021100 Sobic009G056800 Sobic009G056800 Sobic001G351700--Sobic009G056800 Sobic001G306000 Sobic001G306000 Sobic001G351700--Sobic001G306000 Sobic003G433100 Sobic003G433100 Sobic001G351700--Sobic003G433100 Sobic001G351700--Sobic009G172400 Sobic001G371200 Sobic001G371200 Sobic001G351700--Sobic001G371200 Sobic003G333600 Sobic003G333600 Sobic009G172400--Sobic003G333600 Sobic009G249200 Sobic009G249200 Sobic009G172400--Sobic009G249200 Sobic005G105000 Sobic005G105000 Sobic009G172400--Sobic005G105000 Sobic009G138100 Sobic009G138100 Sobic009G172400--Sobic009G138100 Sobic009G172400--Sobic004G267300 Sobic003G408500 Sobic003G408500 Sobic009G172400--Sobic003G408500 Sobic004G205600 Sobic004G205600 Sobic009G172400--Sobic004G205600 Sobic009G172400--Sobic001G351700 Sobic010G145900 Sobic010G145900 Sobic009G172400--Sobic010G145900 Sobic006G209500 Sobic006G209500 Sobic002G324200--Sobic006G209500 Sobic004G271900 Sobic004G271900 Sobic002G324200--Sobic004G271900 Sobic010G263800 Sobic010G263800 Sobic002G324200--Sobic010G263800 Sobic009G117400 Sobic009G117400 Sobic002G324200--Sobic009G117400 Sobic002G324200--Sobic002G157300 Sobic009G156000 Sobic009G156000 Sobic002G324200--Sobic009G156000 Sobic004G256600 Sobic004G256600 Sobic002G324200--Sobic004G256600 Sobic002G324200--Sobic008G025900 Sobic002G077200 Sobic002G077200 Sobic002G324200--Sobic002G077200 Sobic001G111900 Sobic001G111900 Sobic010G056000--Sobic001G111900 Sobic003G084900 Sobic003G084900 Sobic010G056000--Sobic003G084900 Sobic010G028800 Sobic010G028800 Sobic010G056000--Sobic010G028800 Sobic009G127900 Sobic009G127900 Sobic010G056000--Sobic009G127900 Sobic010G056000--Sobic003G087400 Sobic003G187400 Sobic003G187400 Sobic010G056000--Sobic003G187400 Sobic005G077466 Sobic005G077466 Sobic010G056000--Sobic005G077466 Sobic001G094000 Sobic001G094000 Sobic010G056000--Sobic001G094000 Sobic010G056000--Sobic002G157300 Sobic004G132150--Sobic005G139800 Sobic004G132150--Sobic005G110427 Sobic004G132150--Sobic008G025900 Sobic004G132150--Sobic009G209800 Sobic005G055150 Sobic005G055150 Sobic004G132150--Sobic005G055150 Sobic004G132150--Sobic008G049701 Sobic010G225226 Sobic010G225226 Sobic004G132150--Sobic010G225226 Sobic001G287101 Sobic001G287101 Sobic004G132150--Sobic001G287101 Sobic005G117801 Sobic005G117801 Sobic004G132150--Sobic005G117801
Octagon: transcription factors


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