Gene annotation
Transcriptome id Sobic.002G324200.1
Synonym Sb02g035170
Functional annotation translation initiation factor SUI1, putative, expressed
UniProt C5XA40
Pfam PF01253
Panther DB PTHR10388 PTHR10388:SF14
NCBI CDD KOG1770; Translation initiation factor 1 (eIF-1/SUI1)
KEGG Orthology K03113; EIF1, translation initiation factor 1
Gene Ontology GO:0006413; translational initiation GO:0003743translation initiation factor activity


Orthologs (automatic annotation)
TAIR AT1G54290 : Translation initiation factor SUI1 family protein
RAP-DB (Rice) LOC_Os07g34589.3 : translation initiation factor SUI1, putative, expressed
MaizeGDB (Corn) Zm00025a048261
Brachypodium KQK15926
Barley HORVU2Hr1G045250.2 , HORVU2Hr1G045250.3 , HORVU2Hr1G045250.1 , HORVU2Hr1G045250.6 , HORVU2Hr1G045250.4 , HORVU2Hr1G045250.5 , HORVU4Hr1G010890.1
Wheat TraesCS2A02G219000 , TraesCS2D02G224400 , TraesCS2B02G244400
Populus -


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cDNA sequences
Sobic.002G324200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
2 Sobic.004G271900 RMD5 homolog A, putative, expressed -
3 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
4 Sobic.009G117400 protein kinase domain containing protein, expressed -
5 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
6 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
7 Sobic.004G256600 KH domain containing protein, putative, expressed K14945: protein quaking
8 Sobic.008G025900 expressed protein -
9 Sobic.002G077200 expressed protein -
10 Sobic.003G258400 splicing factor-related, putative, expressed -
11 Sobic.005G141801 - -
12 Sobic.003G093600 methyltransferase, putative, expressed -
13 Sobic.003G202800 holocarboxylase synthetase, putative, expressed -
14 Sobic.001G347600 paramyosin, putative, expressed -
15 Sobic.010G026400 BUD13, putative, expressed K13106: BUD13, pre-mRNA-splicing factor CWC26
16 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
17 Sobic.002G313300 bromodomain domain containing protein, expressed -
18 Sobic.006G128800 expressed protein -
19 Sobic.002G283300 protein kinase family protein, putative, expressed -
20 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic002G324200 Sobic002G324200 Sobic006G209500 Sobic006G209500 Sobic002G324200--Sobic006G209500 Sobic004G271900 Sobic004G271900 Sobic002G324200--Sobic004G271900 Sobic010G263800 Sobic010G263800 Sobic002G324200--Sobic010G263800 Sobic009G117400 Sobic009G117400 Sobic002G324200--Sobic009G117400 Sobic002G157300 Sobic002G157300 Sobic002G324200--Sobic002G157300 Sobic009G156000 Sobic009G156000 Sobic002G324200--Sobic009G156000 Sobic004G256600 Sobic004G256600 Sobic002G324200--Sobic004G256600 Sobic008G025900 Sobic008G025900 Sobic002G324200--Sobic008G025900 Sobic002G077200 Sobic002G077200 Sobic002G324200--Sobic002G077200 Sobic001G478300 Sobic001G478300 Sobic006G209500--Sobic001G478300 Sobic006G209500--Sobic004G271900 Sobic006G088100 Sobic006G088100 Sobic006G209500--Sobic006G088100 Sobic003G093600 Sobic003G093600 Sobic006G209500--Sobic003G093600 Sobic006G209500--Sobic002G324200 Sobic006G209500--Sobic009G117400 Sobic004G150400 Sobic004G150400 Sobic006G209500--Sobic004G150400 Sobic002G262600 Sobic002G262600 Sobic006G209500--Sobic002G262600 Sobic007G205800 Sobic007G205800 Sobic006G209500--Sobic007G205800 Sobic004G271900--Sobic009G117400 Sobic004G271900--Sobic007G205800 Sobic008G034600 Sobic008G034600 Sobic004G271900--Sobic008G034600 Sobic004G271900--Sobic010G263800 Sobic004G271900--Sobic003G093600 Sobic004G271900--Sobic004G256600 Sobic007G011400 Sobic007G011400 Sobic004G271900--Sobic007G011400 Sobic003G258400 Sobic003G258400 Sobic004G271900--Sobic003G258400 Sobic009G117300 Sobic009G117300 Sobic004G271900--Sobic009G117300 Sobic006G009400 Sobic006G009400 Sobic010G263800--Sobic006G009400 Sobic010G263800--Sobic007G011400 Sobic010G263800--Sobic002G077200 Sobic002G313300 Sobic002G313300 Sobic010G263800--Sobic002G313300 Sobic010G263800--Sobic002G157300 Sobic010G263800--Sobic007G205800 Sobic010G263800--Sobic009G117400 Sobic001G347600 Sobic001G347600 Sobic010G263800--Sobic001G347600 Sobic010G263800--Sobic008G034600 Sobic009G117400--Sobic009G117300 Sobic009G117400--Sobic004G271900 Sobic009G117400--Sobic010G263800 Sobic009G117400--Sobic007G205800 Sobic009G117400--Sobic004G256600 Sobic009G117400--Sobic008G034600 Sobic009G117400--Sobic001G347600 Sobic004G057400 Sobic004G057400 Sobic009G117400--Sobic004G057400 Sobic009G117400--Sobic006G209500 Sobic010G026400 Sobic010G026400 Sobic002G157300--Sobic010G026400 Sobic003G187400 Sobic003G187400 Sobic002G157300--Sobic003G187400 Sobic002G157300--Sobic007G011400 Sobic005G149500 Sobic005G149500 Sobic002G157300--Sobic005G149500 Sobic001G094000 Sobic001G094000 Sobic002G157300--Sobic001G094000 Sobic010G260500 Sobic010G260500 Sobic002G157300--Sobic010G260500 Sobic007G185900 Sobic007G185900 Sobic002G157300--Sobic007G185900 Sobic002G157300--Sobic010G263800 Sobic006G173100 Sobic006G173100 Sobic002G157300--Sobic006G173100 Sobic002G283300 Sobic002G283300 Sobic009G156000--Sobic002G283300 Sobic005G028400 Sobic005G028400 Sobic009G156000--Sobic005G028400 Sobic009G156000--Sobic003G093600 Sobic008G161401 Sobic008G161401 Sobic009G156000--Sobic008G161401 Sobic005G130200 Sobic005G130200 Sobic009G156000--Sobic005G130200 Sobic002G165300 Sobic002G165300 Sobic009G156000--Sobic002G165300 Sobic001G479500 Sobic001G479500 Sobic009G156000--Sobic001G479500 Sobic010G248200 Sobic010G248200 Sobic009G156000--Sobic010G248200 Sobic004G143700 Sobic004G143700 Sobic009G156000--Sobic004G143700 Sobic004G256600--Sobic003G258400 Sobic004G256600--Sobic004G271900 Sobic004G256600--Sobic010G263800 Sobic009G040700 Sobic009G040700 Sobic004G256600--Sobic009G040700 Sobic005G187200 Sobic005G187200 Sobic004G256600--Sobic005G187200 Sobic004G256600--Sobic006G009400 Sobic009G231300 Sobic009G231300 Sobic004G256600--Sobic009G231300 Sobic004G256600--Sobic009G117400 Sobic004G256600--Sobic002G077200 Sobic002G224450 Sobic002G224450 Sobic008G025900--Sobic002G224450 Sobic005G139800 Sobic005G139800 Sobic008G025900--Sobic005G139800 Sobic004G121000 Sobic004G121000 Sobic008G025900--Sobic004G121000 Sobic005G221425 Sobic005G221425 Sobic008G025900--Sobic005G221425 Sobic009G209800 Sobic009G209800 Sobic008G025900--Sobic009G209800 Sobic001G240400 Sobic001G240400 Sobic008G025900--Sobic001G240400 Sobic009G157500 Sobic009G157500 Sobic008G025900--Sobic009G157500 Sobic005G110427 Sobic005G110427 Sobic008G025900--Sobic005G110427 Sobic008G049701 Sobic008G049701 Sobic008G025900--Sobic008G049701 Sobic002G077200--Sobic002G313300 Sobic002G077200--Sobic010G263800 Sobic002G077200--Sobic003G258400 Sobic002G077200--Sobic007G205800 Sobic002G077200--Sobic006G009400 Sobic002G077200--Sobic009G231300 Sobic001G477800 Sobic001G477800 Sobic002G077200--Sobic001G477800 Sobic002G077200--Sobic005G187200 Sobic001G543900 Sobic001G543900 Sobic002G077200--Sobic001G543900
Octagon: transcription factors


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