Gene annotation
Transcriptome id Sobic.003G093600.1
Synonym AR401, Sb03g007820
Functional annotation methyltransferase, putative, expressed
UniProt C5XE77
Pfam PF13847
Panther DB PTHR12843 PTHR12843:SF6
NCBI CDD KOG1271; Methyltransferases
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G66680 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g03090.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a035504
Brachypodium KQK02459
Barley -
Wheat TraesCS3B02G019300 , TraesCS3A02G025700 , TraesCS3D02G020000
Populus -


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cDNA sequences
Sobic.003G093600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G023700 MA3 domain containing protein, expressed -
2 Sobic.009G022200 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
3 Sobic.004G271900 RMD5 homolog A, putative, expressed -
4 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
5 Sobic.004G143700 protein phosphatase 2C, putative, expressed -
6 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
7 Sobic.009G087800 seven in absentia protein family domain containing protein, expressed K08742: E3 ubiquitin-protein ligase SIAH2
8 Sobic.003G258400 splicing factor-related, putative, expressed -
9 Sobic.001G424700 CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2
10 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
11 Sobic.002G283300 protein kinase family protein, putative, expressed -
12 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
13 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
14 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
15 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
16 Sobic.010G019100 expressed protein -
17 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
18 Sobic.001G347600 paramyosin, putative, expressed -
19 Sobic.003G261300 arginine/serine-rich coiled-coil protein 1, putative, expressed -
20 Sobic.010G042900 expressed protein -


Gene co-expression network
sample Sobic003G093600 Sobic003G093600 Sobic007G023700 Sobic007G023700 Sobic003G093600--Sobic007G023700 Sobic009G022200 Sobic009G022200 Sobic003G093600--Sobic009G022200 Sobic004G271900 Sobic004G271900 Sobic003G093600--Sobic004G271900 Sobic007G205800 Sobic007G205800 Sobic003G093600--Sobic007G205800 Sobic004G143700 Sobic004G143700 Sobic003G093600--Sobic004G143700 Sobic009G156000 Sobic009G156000 Sobic003G093600--Sobic009G156000 Sobic009G087800 Sobic009G087800 Sobic003G093600--Sobic009G087800 Sobic003G258400 Sobic003G258400 Sobic003G093600--Sobic003G258400 Sobic001G424700 Sobic001G424700 Sobic003G093600--Sobic001G424700 Sobic007G023700--Sobic003G093600 Sobic002G039500 Sobic002G039500 Sobic007G023700--Sobic002G039500 Sobic009G180200 Sobic009G180200 Sobic007G023700--Sobic009G180200 Sobic007G023700--Sobic004G143700 Sobic002G108800 Sobic002G108800 Sobic007G023700--Sobic002G108800 Sobic002G221900 Sobic002G221900 Sobic007G023700--Sobic002G221900 Sobic007G156500 Sobic007G156500 Sobic007G023700--Sobic007G156500 Sobic001G347600 Sobic001G347600 Sobic007G023700--Sobic001G347600 Sobic006G184300 Sobic006G184300 Sobic007G023700--Sobic006G184300 Sobic007G011400 Sobic007G011400 Sobic009G022200--Sobic007G011400 Sobic009G022200--Sobic007G205800 Sobic009G022200--Sobic003G093600 Sobic008G034600 Sobic008G034600 Sobic009G022200--Sobic008G034600 Sobic004G211400 Sobic004G211400 Sobic009G022200--Sobic004G211400 Sobic009G022200--Sobic009G087800 Sobic009G022200--Sobic004G271900 Sobic008G116500 Sobic008G116500 Sobic009G022200--Sobic008G116500 Sobic009G022200--Sobic003G258400 Sobic009G117400 Sobic009G117400 Sobic004G271900--Sobic009G117400 Sobic004G271900--Sobic007G205800 Sobic004G271900--Sobic008G034600 Sobic010G263800 Sobic010G263800 Sobic004G271900--Sobic010G263800 Sobic004G271900--Sobic003G093600 Sobic004G256600 Sobic004G256600 Sobic004G271900--Sobic004G256600 Sobic004G271900--Sobic007G011400 Sobic004G271900--Sobic003G258400 Sobic009G117300 Sobic009G117300 Sobic004G271900--Sobic009G117300 Sobic007G205800--Sobic007G011400 Sobic007G205800--Sobic009G087800 Sobic007G205800--Sobic010G263800 Sobic007G205800--Sobic008G034600 Sobic007G205800--Sobic004G271900 Sobic007G205800--Sobic009G022200 Sobic007G205800--Sobic003G093600 Sobic007G205800--Sobic003G258400 Sobic002G077200 Sobic002G077200 Sobic007G205800--Sobic002G077200 Sobic007G073400 Sobic007G073400 Sobic004G143700--Sobic007G073400 Sobic004G143700--Sobic007G023700 Sobic004G212800 Sobic004G212800 Sobic004G143700--Sobic004G212800 Sobic002G283300 Sobic002G283300 Sobic004G143700--Sobic002G283300 Sobic010G248200 Sobic010G248200 Sobic004G143700--Sobic010G248200 Sobic001G024200 Sobic001G024200 Sobic004G143700--Sobic001G024200 Sobic004G143700--Sobic003G093600 Sobic001G439500 Sobic001G439500 Sobic004G143700--Sobic001G439500 Sobic001G543900 Sobic001G543900 Sobic004G143700--Sobic001G543900 Sobic009G156000--Sobic002G283300 Sobic005G028400 Sobic005G028400 Sobic009G156000--Sobic005G028400 Sobic009G156000--Sobic003G093600 Sobic008G161401 Sobic008G161401 Sobic009G156000--Sobic008G161401 Sobic005G130200 Sobic005G130200 Sobic009G156000--Sobic005G130200 Sobic002G165300 Sobic002G165300 Sobic009G156000--Sobic002G165300 Sobic001G479500 Sobic001G479500 Sobic009G156000--Sobic001G479500 Sobic009G156000--Sobic010G248200 Sobic009G156000--Sobic004G143700 Sobic009G087800--Sobic007G205800 Sobic009G087800--Sobic003G258400 Sobic009G087800--Sobic007G011400 Sobic009G087800--Sobic003G093600 Sobic009G087800--Sobic004G271900 Sobic009G087800--Sobic010G263800 Sobic010G026400 Sobic010G026400 Sobic009G087800--Sobic010G026400 Sobic009G087800--Sobic001G424700 Sobic009G198900 Sobic009G198900 Sobic009G087800--Sobic009G198900 Sobic003G258400--Sobic002G077200 Sobic003G258400--Sobic004G256600 Sobic003G258400--Sobic009G087800 Sobic009G231300 Sobic009G231300 Sobic003G258400--Sobic009G231300 Sobic003G258400--Sobic009G180200 Sobic003G258400--Sobic004G271900 Sobic003G258400--Sobic007G205800 Sobic003G258400--Sobic003G093600 Sobic009G110366 Sobic009G110366 Sobic003G258400--Sobic009G110366 Sobic007G078000 Sobic007G078000 Sobic001G424700--Sobic007G078000 Sobic003G333600 Sobic003G333600 Sobic001G424700--Sobic003G333600 Sobic005G149500 Sobic005G149500 Sobic001G424700--Sobic005G149500 Sobic004G196700 Sobic004G196700 Sobic001G424700--Sobic004G196700 Sobic001G424700--Sobic003G093600 Sobic001G424700--Sobic009G087800 Sobic010G260500 Sobic010G260500 Sobic001G424700--Sobic010G260500 Sobic001G424700--Sobic007G205800 Sobic004G205600 Sobic004G205600 Sobic001G424700--Sobic004G205600
Octagon: transcription factors


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