Gene annotation
Transcriptome id Sobic.001G424700.2,Sobic.001G424700.1,Sobic.001G424700.3
Synonym Sb01g039915
Functional annotation CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1B6QP93 , C5WQ31 , A0A1Z5SAA9
Pfam PF00069
Panther DB PTHR24348
NCBI CDD KOG0595; Serine/threonine-protein kinase involved in autophagy
KEGG Orthology K08269; ULK2, serine/threonine-protein kinase ULK2
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G37840 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g16130.1 : CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a037353 , Zm00025a055908 , Zm00025a052777 , Zm00025a036945 , Zm00025a001779
Brachypodium KQK22394
Barley HORVU4Hr1G060450.13 , HORVU4Hr1G060450.12 , HORVU4Hr1G060450.11 , HORVU4Hr1G060450.10 , HORVU4Hr1G060450.17 , HORVU4Hr1G060450.16 , HORVU4Hr1G060450.15 , HORVU4Hr1G060450.14 , HORVU4Hr1G060450.19 , HORVU4Hr1G060450.18 , HORVU4Hr1G060450.22 , HORVU4Hr1G060450.23 , HORVU4Hr1G060450.20 , HORVU4Hr1G060450.21 , HORVU4Hr1G060450.3 , HORVU4Hr1G060450.2 , HORVU4Hr1G060450.1 , HORVU4Hr1G060450.7 , HORVU4Hr1G060450.6 , HORVU4Hr1G060450.5 , HORVU4Hr1G060450.4 , HORVU4Hr1G060450.9 , HORVU4Hr1G060450.8
Wheat TraesCS4D02G211300 , TraesCS4D02G211300 , TraesCS4D02G211300 , TraesCS4A02G093800 , TraesCS4A02G093800 , TraesCS4A02G093800 , TraesCS4B02G210600 , TraesCS4B02G210600
Populus -


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cDNA sequences
Sobic.001G424700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
2 Sobic.003G333600 OsFBX29 - F-box domain containing protein, expressed -
3 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
4 Sobic.004G196700 expressed protein -
5 Sobic.003G093600 methyltransferase, putative, expressed -
6 Sobic.009G087800 seven in absentia protein family domain containing protein, expressed K08742: E3 ubiquitin-protein ligase SIAH2
7 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
8 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
9 Sobic.004G205600 bromodomain domain containing protein, expressed -
10 Sobic.004G153600 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
11 Sobic.007G185900 IBR domain containing protein, putative, expressed K11968: ariadne-1
12 Sobic.001G194900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K00311: electron-transferring-flavoprotein dehydrogenase
13 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
14 Sobic.009G022200 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
15 Sobic.009G198900 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
16 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
17 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
18 Sobic.001G543800 ethylene-responsive element-binding protein, putative, expressed -
19 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
20 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase


Gene co-expression network
sample Sobic001G424700 Sobic001G424700 Sobic007G078000 Sobic007G078000 Sobic001G424700--Sobic007G078000 Sobic003G333600 Sobic003G333600 Sobic001G424700--Sobic003G333600 Sobic005G149500 Sobic005G149500 Sobic001G424700--Sobic005G149500 Sobic004G196700 Sobic004G196700 Sobic001G424700--Sobic004G196700 Sobic003G093600 Sobic003G093600 Sobic001G424700--Sobic003G093600 Sobic009G087800 Sobic009G087800 Sobic001G424700--Sobic009G087800 Sobic010G260500 Sobic010G260500 Sobic001G424700--Sobic010G260500 Sobic007G205800 Sobic007G205800 Sobic001G424700--Sobic007G205800 Sobic004G205600 Sobic004G205600 Sobic001G424700--Sobic004G205600 Sobic007G078000--Sobic003G333600 Sobic007G078000--Sobic004G196700 Sobic007G185900 Sobic007G185900 Sobic007G078000--Sobic007G185900 Sobic007G078000--Sobic010G260500 Sobic007G078000--Sobic001G424700 Sobic007G078000--Sobic005G149500 Sobic001G372700 Sobic001G372700 Sobic007G078000--Sobic001G372700 Sobic001G451000 Sobic001G451000 Sobic007G078000--Sobic001G451000 Sobic006G082600 Sobic006G082600 Sobic007G078000--Sobic006G082600 Sobic003G333600--Sobic007G078000 Sobic003G333600--Sobic001G424700 Sobic003G333600--Sobic001G451000 Sobic003G333600--Sobic010G260500 Sobic003G333600--Sobic004G196700 Sobic003G333600--Sobic001G372700 Sobic003G333600--Sobic007G185900 Sobic004G153600 Sobic004G153600 Sobic003G333600--Sobic004G153600 Sobic003G333600--Sobic005G149500 Sobic003G187400 Sobic003G187400 Sobic005G149500--Sobic003G187400 Sobic002G157300 Sobic002G157300 Sobic005G149500--Sobic002G157300 Sobic009G040700 Sobic009G040700 Sobic005G149500--Sobic009G040700 Sobic005G149500--Sobic004G196700 Sobic007G011400 Sobic007G011400 Sobic005G149500--Sobic007G011400 Sobic006G060100 Sobic006G060100 Sobic005G149500--Sobic006G060100 Sobic005G149500--Sobic007G185900 Sobic007G137900 Sobic007G137900 Sobic005G149500--Sobic007G137900 Sobic005G149500--Sobic007G078000 Sobic004G196700--Sobic007G185900 Sobic004G196700--Sobic007G078000 Sobic004G196700--Sobic005G149500 Sobic004G196700--Sobic007G137900 Sobic004G196700--Sobic002G157300 Sobic004G196700--Sobic003G187400 Sobic001G477800 Sobic001G477800 Sobic004G196700--Sobic001G477800 Sobic004G196700--Sobic006G082600 Sobic004G196700--Sobic009G040700 Sobic007G023700 Sobic007G023700 Sobic003G093600--Sobic007G023700 Sobic009G022200 Sobic009G022200 Sobic003G093600--Sobic009G022200 Sobic004G271900 Sobic004G271900 Sobic003G093600--Sobic004G271900 Sobic003G093600--Sobic007G205800 Sobic004G143700 Sobic004G143700 Sobic003G093600--Sobic004G143700 Sobic009G156000 Sobic009G156000 Sobic003G093600--Sobic009G156000 Sobic003G093600--Sobic009G087800 Sobic003G258400 Sobic003G258400 Sobic003G093600--Sobic003G258400 Sobic003G093600--Sobic001G424700 Sobic009G087800--Sobic007G205800 Sobic009G087800--Sobic003G258400 Sobic009G087800--Sobic007G011400 Sobic009G087800--Sobic003G093600 Sobic009G087800--Sobic004G271900 Sobic010G263800 Sobic010G263800 Sobic009G087800--Sobic010G263800 Sobic010G026400 Sobic010G026400 Sobic009G087800--Sobic010G026400 Sobic009G087800--Sobic001G424700 Sobic009G198900 Sobic009G198900 Sobic009G087800--Sobic009G198900 Sobic010G260500--Sobic002G157300 Sobic008G174300 Sobic008G174300 Sobic010G260500--Sobic008G174300 Sobic010G260500--Sobic007G078000 Sobic010G260500--Sobic007G185900 Sobic010G033400 Sobic010G033400 Sobic010G260500--Sobic010G033400 Sobic010G260500--Sobic001G451000 Sobic004G263900 Sobic004G263900 Sobic010G260500--Sobic004G263900 Sobic010G260500--Sobic005G149500 Sobic010G260500--Sobic003G187400 Sobic007G205800--Sobic007G011400 Sobic007G205800--Sobic009G087800 Sobic007G205800--Sobic010G263800 Sobic008G034600 Sobic008G034600 Sobic007G205800--Sobic008G034600 Sobic007G205800--Sobic004G271900 Sobic007G205800--Sobic009G022200 Sobic007G205800--Sobic003G093600 Sobic007G205800--Sobic003G258400 Sobic002G077200 Sobic002G077200 Sobic007G205800--Sobic002G077200 Sobic004G057400 Sobic004G057400 Sobic004G205600--Sobic004G057400 Sobic001G497300 Sobic001G497300 Sobic004G205600--Sobic001G497300 Sobic001G090400 Sobic001G090400 Sobic004G205600--Sobic001G090400 Sobic003G081000 Sobic003G081000 Sobic004G205600--Sobic003G081000 Sobic007G026300 Sobic007G026300 Sobic004G205600--Sobic007G026300 Sobic009G000500 Sobic009G000500 Sobic004G205600--Sobic009G000500 Sobic004G205600--Sobic002G157300 Sobic009G065100 Sobic009G065100 Sobic004G205600--Sobic009G065100 Sobic002G157000 Sobic002G157000 Sobic004G205600--Sobic002G157000
Octagon: transcription factors


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