Gene annotation
Transcriptome id Sobic.009G198900.2
Synonym ATTPS7, TPS7, ATTPSA, Sb09g025660
Functional annotation trehalose synthase, putative, expressed
UniProt A0A1Z5R4L3
Pfam PF02358 PF00982
Panther DB PTHR10788 PTHR10788:SF44
NCBI CDD -
KEGG Orthology K16055; trehalose 6-phosphate synthase/phosphatase
Gene Ontology GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT1G06410 : trehalose-phosphatase/synthase 7
RAP-DB (Rice) LOC_Os05g44100.1 : trehalose synthase, putative, expressed
MaizeGDB (Corn) Zm00025a027584 , Zm00025a027583 , Zm00025a040050
Brachypodium KQK09736 , KQK05370
Barley HORVU1Hr1G076480.3 , HORVU1Hr1G076480.1 , HORVU1Hr1G076480.4 , HORVU3Hr1G071570.4 , HORVU3Hr1G071570.1 , HORVU3Hr1G071570.3 , HORVU3Hr1G071570.2 , HORVU3Hr1G071570.5 , HORVU3Hr1G071570.6
Wheat TraesCS3D02G289100 , TraesCS3D02G289100 , TraesCS3D02G289100 , TraesCS3A02G289300 , TraesCS3B02G323900 , TraesCS1A02G338200 , TraesCS1B02G350600 , TraesCS1D02G340400 , TraesCS3B02G323900
Populus -


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cDNA sequences
Sobic.009G198900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G324000 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed K00074: paaH, hbd, fadB, 3-hydroxybutyryl-CoA dehydrogenase
2 Sobic.009G087800 seven in absentia protein family domain containing protein, expressed K08742: E3 ubiquitin-protein ligase SIAH2
3 Sobic.010G280100 expressed protein -
4 Sobic.003G258400 splicing factor-related, putative, expressed -
5 Sobic.005G187200 expressed protein -
6 Sobic.007G054000 powdery mildew resistance protein PM3b, putative, expressed -
7 Sobic.009G110366 - -
8 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
9 Sobic.006G196000 expressed protein -
10 Sobic.001G479500 dihydroflavonol-4-reductase, putative, expressed K15891: NAD+-dependent farnesol dehydrogenase
11 Sobic.007G023700 MA3 domain containing protein, expressed -
12 Sobic.004G143700 protein phosphatase 2C, putative, expressed -
13 Sobic.001G424700 CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2
14 Sobic.002G226000 leucine-rich repeat family protein, putative, expressed -
15 Sobic.009G180200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
16 Sobic.003G093600 methyltransferase, putative, expressed -
17 Sobic.001G368400 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
18 Sobic.007G035600 MSP domain containing protein, putative, expressed -
19 Sobic.001G194900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K00311: electron-transferring-flavoprotein dehydrogenase
20 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic009G198900 Sobic009G198900 Sobic003G324000 Sobic003G324000 Sobic009G198900--Sobic003G324000 Sobic009G087800 Sobic009G087800 Sobic009G198900--Sobic009G087800 Sobic010G280100 Sobic010G280100 Sobic009G198900--Sobic010G280100 Sobic003G258400 Sobic003G258400 Sobic009G198900--Sobic003G258400 Sobic005G187200 Sobic005G187200 Sobic009G198900--Sobic005G187200 Sobic007G054000 Sobic007G054000 Sobic009G198900--Sobic007G054000 Sobic009G110366 Sobic009G110366 Sobic009G198900--Sobic009G110366 Sobic007G205800 Sobic007G205800 Sobic009G198900--Sobic007G205800 Sobic006G196000 Sobic006G196000 Sobic009G198900--Sobic006G196000 Sobic003G324000--Sobic009G198900 Sobic001G368400 Sobic001G368400 Sobic003G324000--Sobic001G368400 Sobic003G324000--Sobic005G187200 Sobic010G056200 Sobic010G056200 Sobic003G324000--Sobic010G056200 Sobic001G479500 Sobic001G479500 Sobic003G324000--Sobic001G479500 Sobic003G324000--Sobic010G280100 Sobic003G324000--Sobic007G205800 Sobic003G324000--Sobic009G087800 Sobic003G324000--Sobic003G258400 Sobic009G087800--Sobic007G205800 Sobic009G087800--Sobic003G258400 Sobic007G011400 Sobic007G011400 Sobic009G087800--Sobic007G011400 Sobic003G093600 Sobic003G093600 Sobic009G087800--Sobic003G093600 Sobic004G271900 Sobic004G271900 Sobic009G087800--Sobic004G271900 Sobic010G263800 Sobic010G263800 Sobic009G087800--Sobic010G263800 Sobic010G026400 Sobic010G026400 Sobic009G087800--Sobic010G026400 Sobic001G424700 Sobic001G424700 Sobic009G087800--Sobic001G424700 Sobic009G087800--Sobic009G198900 Sobic010G280100--Sobic009G198900 Sobic004G119000 Sobic004G119000 Sobic010G280100--Sobic004G119000 Sobic010G280100--Sobic003G324000 Sobic007G052900 Sobic007G052900 Sobic010G280100--Sobic007G052900 Sobic008G136200 Sobic008G136200 Sobic010G280100--Sobic008G136200 Sobic010G280100--Sobic009G087800 Sobic010G280100--Sobic007G205800 Sobic010G280100--Sobic001G368400 Sobic006G273200 Sobic006G273200 Sobic010G280100--Sobic006G273200 Sobic002G077200 Sobic002G077200 Sobic003G258400--Sobic002G077200 Sobic004G256600 Sobic004G256600 Sobic003G258400--Sobic004G256600 Sobic003G258400--Sobic009G087800 Sobic009G231300 Sobic009G231300 Sobic003G258400--Sobic009G231300 Sobic009G180200 Sobic009G180200 Sobic003G258400--Sobic009G180200 Sobic003G258400--Sobic004G271900 Sobic003G258400--Sobic007G205800 Sobic003G258400--Sobic003G093600 Sobic003G258400--Sobic009G110366 Sobic005G187200--Sobic010G263800 Sobic005G187200--Sobic004G271900 Sobic005G187200--Sobic001G479500 Sobic005G187200--Sobic004G256600 Sobic005G187200--Sobic007G205800 Sobic005G187200--Sobic007G011400 Sobic005G187200--Sobic002G077200 Sobic009G134500 Sobic009G134500 Sobic005G187200--Sobic009G134500 Sobic001G194900 Sobic001G194900 Sobic005G187200--Sobic001G194900 Sobic007G037900 Sobic007G037900 Sobic007G054000--Sobic007G037900 Sobic007G054000--Sobic001G479500 Sobic007G054000--Sobic009G198900 Sobic006G246900 Sobic006G246900 Sobic007G054000--Sobic006G246900 Sobic006G066650 Sobic006G066650 Sobic007G054000--Sobic006G066650 Sobic007G054000--Sobic005G187200 Sobic001G543800 Sobic001G543800 Sobic007G054000--Sobic001G543800 Sobic001G162300 Sobic001G162300 Sobic007G054000--Sobic001G162300 Sobic006G128900 Sobic006G128900 Sobic007G054000--Sobic006G128900 Sobic007G073400 Sobic007G073400 Sobic009G110366--Sobic007G073400 Sobic004G020401 Sobic004G020401 Sobic009G110366--Sobic004G020401 Sobic009G109450 Sobic009G109450 Sobic009G110366--Sobic009G109450 Sobic009G110366--Sobic003G258400 Sobic009G110366--Sobic006G196000 Sobic004G143700 Sobic004G143700 Sobic009G110366--Sobic004G143700 Sobic004G291800 Sobic004G291800 Sobic009G110366--Sobic004G291800 Sobic009G110366--Sobic009G180200 Sobic009G110366--Sobic009G198900 Sobic007G205800--Sobic007G011400 Sobic007G205800--Sobic009G087800 Sobic007G205800--Sobic010G263800 Sobic008G034600 Sobic008G034600 Sobic007G205800--Sobic008G034600 Sobic007G205800--Sobic004G271900 Sobic009G022200 Sobic009G022200 Sobic007G205800--Sobic009G022200 Sobic007G205800--Sobic003G093600 Sobic007G205800--Sobic003G258400 Sobic007G205800--Sobic002G077200 Sobic006G196000--Sobic009G109450 Sobic006G196000--Sobic009G110366 Sobic005G130100 Sobic005G130100 Sobic006G196000--Sobic005G130100 Sobic009G078500 Sobic009G078500 Sobic006G196000--Sobic009G078500 Sobic003G357500 Sobic003G357500 Sobic006G196000--Sobic003G357500 Sobic006G196000--Sobic001G479500 Sobic006G196000--Sobic009G231300 Sobic006G196000--Sobic009G180200 Sobic006G196000--Sobic009G198900
Octagon: transcription factors


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