Gene annotation
Transcriptome id Sobic.001G368400.1
Synonym Sb01g035080
Functional annotation glutaredoxin, putative, expressed
UniProt C5WZQ3
Pfam PF00462
Panther DB PTHR10168 PTHR10168:SF103
NCBI CDD -
KEGG Orthology K17479; glutaredoxin domain-containing cysteine-rich protein 1
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G13810 : Glutaredoxin family protein
RAP-DB (Rice) LOC_Os03g24030.1 : glutaredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a002525
Brachypodium KQK21649 , KQK06797
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G368400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G324000 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed K00074: paaH, hbd, fadB, 3-hydroxybutyryl-CoA dehydrogenase
2 Sobic.007G037900 oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed -
3 Sobic.009G198900 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
4 Sobic.003G107800 "thylakoid lumenal 17.9 kDa protein, chloroplast"(PubMedID : 26465154)@expressed protein -
5 Sobic.003G258400 splicing factor-related, putative, expressed -
6 Sobic.007G035600 MSP domain containing protein, putative, expressed -
7 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
8 Sobic.004G113800 CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
9 Sobic.005G028400 "Ca ATPase, IIB type"(PubMedID : 22196357)@Autoihibited Ca2+ - ATPase 11(PubMedID : 26320239)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
10 Sobic.001G479500 dihydroflavonol-4-reductase, putative, expressed K15891: NAD+-dependent farnesol dehydrogenase
11 Sobic.009G087800 seven in absentia protein family domain containing protein, expressed K08742: E3 ubiquitin-protein ligase SIAH2
12 Sobic.010G280100 expressed protein -
13 Sobic.009G232700 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
14 Sobic.008G136200 spotted leaf 11, putative, expressed -
15 Sobic.007G052900 acetyltransferase, GNAT family, putative, expressed -
16 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
17 Sobic.002G144933 - -
18 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
19 Sobic.001G504000 Citrate transporter protein, putative, expressed -
20 Sobic.001G394400 controls maturity(PubMedID : 20585750)@"Regulation of the flowering time, PHYB"(PubMedID : 25961888)@far-red light perception and signal transduction(PubMedID : 14963106)@phytochrome B, putative, expressed K12121: phytochrome B


Gene co-expression network
sample Sobic001G368400 Sobic001G368400 Sobic003G324000 Sobic003G324000 Sobic001G368400--Sobic003G324000 Sobic007G037900 Sobic007G037900 Sobic001G368400--Sobic007G037900 Sobic009G198900 Sobic009G198900 Sobic001G368400--Sobic009G198900 Sobic003G107800 Sobic003G107800 Sobic001G368400--Sobic003G107800 Sobic003G258400 Sobic003G258400 Sobic001G368400--Sobic003G258400 Sobic007G035600 Sobic007G035600 Sobic001G368400--Sobic007G035600 Sobic007G205800 Sobic007G205800 Sobic001G368400--Sobic007G205800 Sobic004G113800 Sobic004G113800 Sobic001G368400--Sobic004G113800 Sobic005G028400 Sobic005G028400 Sobic001G368400--Sobic005G028400 Sobic003G324000--Sobic009G198900 Sobic003G324000--Sobic001G368400 Sobic005G187200 Sobic005G187200 Sobic003G324000--Sobic005G187200 Sobic010G056200 Sobic010G056200 Sobic003G324000--Sobic010G056200 Sobic001G479500 Sobic001G479500 Sobic003G324000--Sobic001G479500 Sobic010G280100 Sobic010G280100 Sobic003G324000--Sobic010G280100 Sobic003G324000--Sobic007G205800 Sobic009G087800 Sobic009G087800 Sobic003G324000--Sobic009G087800 Sobic003G324000--Sobic003G258400 Sobic003G268300 Sobic003G268300 Sobic007G037900--Sobic003G268300 Sobic001G420200 Sobic001G420200 Sobic007G037900--Sobic001G420200 Sobic006G246900 Sobic006G246900 Sobic007G037900--Sobic006G246900 Sobic002G144933 Sobic002G144933 Sobic007G037900--Sobic002G144933 Sobic001G274200 Sobic001G274200 Sobic007G037900--Sobic001G274200 Sobic009G127900 Sobic009G127900 Sobic007G037900--Sobic009G127900 Sobic001G162300 Sobic001G162300 Sobic007G037900--Sobic001G162300 Sobic004G290800 Sobic004G290800 Sobic007G037900--Sobic004G290800 Sobic002G157000 Sobic002G157000 Sobic007G037900--Sobic002G157000 Sobic009G198900--Sobic003G324000 Sobic009G198900--Sobic009G087800 Sobic009G198900--Sobic010G280100 Sobic009G198900--Sobic003G258400 Sobic009G198900--Sobic005G187200 Sobic007G054000 Sobic007G054000 Sobic009G198900--Sobic007G054000 Sobic009G110366 Sobic009G110366 Sobic009G198900--Sobic009G110366 Sobic009G198900--Sobic007G205800 Sobic006G196000 Sobic006G196000 Sobic009G198900--Sobic006G196000 Sobic001G211800 Sobic001G211800 Sobic003G107800--Sobic001G211800 Sobic002G376900 Sobic002G376900 Sobic003G107800--Sobic002G376900 Sobic002G376800 Sobic002G376800 Sobic003G107800--Sobic002G376800 Sobic003G107800--Sobic001G368400 Sobic006G009400 Sobic006G009400 Sobic003G107800--Sobic006G009400 Sobic005G121800 Sobic005G121800 Sobic003G107800--Sobic005G121800 Sobic003G107800--Sobic007G037900 Sobic003G020100 Sobic003G020100 Sobic003G107800--Sobic003G020100 Sobic003G107800--Sobic001G479500 Sobic002G077200 Sobic002G077200 Sobic003G258400--Sobic002G077200 Sobic004G256600 Sobic004G256600 Sobic003G258400--Sobic004G256600 Sobic003G258400--Sobic009G087800 Sobic009G231300 Sobic009G231300 Sobic003G258400--Sobic009G231300 Sobic009G180200 Sobic009G180200 Sobic003G258400--Sobic009G180200 Sobic004G271900 Sobic004G271900 Sobic003G258400--Sobic004G271900 Sobic003G258400--Sobic007G205800 Sobic003G093600 Sobic003G093600 Sobic003G258400--Sobic003G093600 Sobic003G258400--Sobic009G110366 Sobic007G035600--Sobic007G205800 Sobic001G347600 Sobic001G347600 Sobic007G035600--Sobic001G347600 Sobic007G035600--Sobic003G324000 Sobic007G035600--Sobic003G093600 Sobic004G143700 Sobic004G143700 Sobic007G035600--Sobic004G143700 Sobic007G035600--Sobic009G198900 Sobic007G035600--Sobic001G368400 Sobic007G035600--Sobic009G087800 SobicK016900 SobicK016900 Sobic007G035600--SobicK016900 Sobic007G011400 Sobic007G011400 Sobic007G205800--Sobic007G011400 Sobic007G205800--Sobic009G087800 Sobic010G263800 Sobic010G263800 Sobic007G205800--Sobic010G263800 Sobic008G034600 Sobic008G034600 Sobic007G205800--Sobic008G034600 Sobic007G205800--Sobic004G271900 Sobic009G022200 Sobic009G022200 Sobic007G205800--Sobic009G022200 Sobic007G205800--Sobic003G093600 Sobic007G205800--Sobic003G258400 Sobic007G205800--Sobic002G077200 Sobic004G113800--Sobic010G056200 Sobic007G052900 Sobic007G052900 Sobic004G113800--Sobic007G052900 Sobic009G140500 Sobic009G140500 Sobic004G113800--Sobic009G140500 Sobic004G113800--Sobic001G368400 Sobic001G118100 Sobic001G118100 Sobic004G113800--Sobic001G118100 Sobic009G034200 Sobic009G034200 Sobic004G113800--Sobic009G034200 Sobic004G241500 Sobic004G241500 Sobic004G113800--Sobic004G241500 Sobic004G174400 Sobic004G174400 Sobic004G113800--Sobic004G174400 Sobic004G113800--Sobic003G324000 Sobic009G156000 Sobic009G156000 Sobic005G028400--Sobic009G156000 Sobic008G161401 Sobic008G161401 Sobic005G028400--Sobic008G161401 Sobic007G073400 Sobic007G073400 Sobic005G028400--Sobic007G073400 Sobic007G211000 Sobic007G211000 Sobic005G028400--Sobic007G211000 Sobic005G028400--Sobic001G479500 Sobic005G028400--Sobic007G205800 Sobic005G028400--Sobic004G143700 Sobic005G028400--Sobic006G009400 Sobic009G183200 Sobic009G183200 Sobic005G028400--Sobic009G183200
Octagon: transcription factors


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