Gene annotation
Transcriptome id Sobic.005G028400.1,Sobic.005G028400.2
Synonym Sb05g002380, ACA11,ACA11
Functional annotation "Ca ATPase, IIB type" (PubMedID : 22196357)
Autoihibited Ca2+ - ATPase 11 (PubMedID : 26320239)
calcium-transporting ATPase, plasma membrane-type, putative, expressed
UniProt C5Y458 , A0A1B6PPV1
Pfam PF00690 PF00702 PF12515 PF00122 PF00689 PF00690 PF00702 PF12515 PF00122
Panther DB PTHR24093 PTHR24093:SF306
NCBI CDD -
KEGG Orthology K01537; P-type Ca2+ transporter type 2C
Gene Ontology GO:0005516; calmodulin binding GO:0000166nucleotide binding


Orthologs (automatic annotation)
TAIR AT3G57330 : autoinhibited Ca2+-ATPase 11
RAP-DB (Rice) LOC_Os12g04220.1 : calcium-transporting ATPase, plasma membrane-type, putative, expressed
MaizeGDB (Corn) Zm00025a033430 , Zm00025a039163 , Zm00025a026087
Brachypodium PNT65496 , PNT65497 , KQJ92384 , KQK11453
Barley HORVU5Hr1G043640.13 , HORVU1Hr1G067550.13 , HORVU5Hr1G043640.16 , HORVU5Hr1G043640.17 , HORVU5Hr1G043640.14 , HORVU5Hr1G043640.15 , HORVU5Hr1G043640.12 , HORVU5Hr1G043640.10 , HORVU5Hr1G043640.11 , HORVU5Hr1G043640.4 , HORVU5Hr1G043640.5 , HORVU5Hr1G043640.6 , HORVU5Hr1G043640.7 , HORVU5Hr1G043640.1 , HORVU5Hr1G043640.2 , HORVU5Hr1G043640.8 , HORVU5Hr1G043640.9 , HORVU1Hr1G067550.6 , HORVU1Hr1G067550.7 , HORVU1Hr1G067550.4 , HORVU1Hr1G067550.5 , HORVU1Hr1G067550.2 , HORVU1Hr1G067550.3 , HORVU1Hr1G067550.1 , HORVU1Hr1G067550.8 , HORVU1Hr1G067550.9 , HORVU1Hr1G067550.18 , HORVU1Hr1G067550.14 , HORVU1Hr1G067550.15 , HORVU1Hr1G067550.16 , HORVU1Hr1G067550.17 , HORVU1Hr1G067550.10 , HORVU1Hr1G067550.11 , HORVU1Hr1G067550.12
Wheat TraesCS5D02G142900 , TraesCS5D02G142900 , TraesCS1B02G324000 , TraesCS1A02G312300 , TraesCS1D02G312500 , TraesCS1D02G312500 , TraesCS5B02G135200 , TraesCS5B02G135200 , TraesCS5B02G135200 , TraesCS5A02G136200
Populus PNT29729 , PNT52247 , PNT29730 , PNS97811 , PNT46637 , PNT46636 , PNT46638


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
2 Sobic.008G161401 - -
3 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
4 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.001G479500 dihydroflavonol-4-reductase, putative, expressed K15891: NAD+-dependent farnesol dehydrogenase
6 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
7 Sobic.004G143700 protein phosphatase 2C, putative, expressed -
8 Sobic.006G009400 G-patch domain containing protein, expressed -
9 Sobic.009G183200 Ca ATPase 6(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
10 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
11 Sobic.009G022200 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
12 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
13 Sobic.002G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
14 Sobic.004G212800 - -
15 Sobic.003G258400 splicing factor-related, putative, expressed -
16 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
17 Sobic.009G110366 - -
18 Sobic.009G002700 serpin domain containing protein, putative, expressed K13963: serpin B
19 Sobic.009G087800 seven in absentia protein family domain containing protein, expressed K08742: E3 ubiquitin-protein ligase SIAH2
20 Sobic.010G124001 - -


Gene co-expression network
sample Sobic005G028400 Sobic005G028400 Sobic009G156000 Sobic009G156000 Sobic005G028400--Sobic009G156000 Sobic008G161401 Sobic008G161401 Sobic005G028400--Sobic008G161401 Sobic007G073400 Sobic007G073400 Sobic005G028400--Sobic007G073400 Sobic007G211000 Sobic007G211000 Sobic005G028400--Sobic007G211000 Sobic001G479500 Sobic001G479500 Sobic005G028400--Sobic001G479500 Sobic007G205800 Sobic007G205800 Sobic005G028400--Sobic007G205800 Sobic004G143700 Sobic004G143700 Sobic005G028400--Sobic004G143700 Sobic006G009400 Sobic006G009400 Sobic005G028400--Sobic006G009400 Sobic009G183200 Sobic009G183200 Sobic005G028400--Sobic009G183200 Sobic002G283300 Sobic002G283300 Sobic009G156000--Sobic002G283300 Sobic009G156000--Sobic005G028400 Sobic003G093600 Sobic003G093600 Sobic009G156000--Sobic003G093600 Sobic009G156000--Sobic008G161401 Sobic005G130200 Sobic005G130200 Sobic009G156000--Sobic005G130200 Sobic002G165300 Sobic002G165300 Sobic009G156000--Sobic002G165300 Sobic009G156000--Sobic001G479500 Sobic010G248200 Sobic010G248200 Sobic009G156000--Sobic010G248200 Sobic009G156000--Sobic004G143700 Sobic008G161401--Sobic010G248200 Sobic004G212800 Sobic004G212800 Sobic008G161401--Sobic004G212800 Sobic008G161401--Sobic007G073400 Sobic008G161401--Sobic005G130200 Sobic003G057800 Sobic003G057800 Sobic008G161401--Sobic003G057800 Sobic003G357500 Sobic003G357500 Sobic008G161401--Sobic003G357500 Sobic008G161401--Sobic009G156000 Sobic002G108800 Sobic002G108800 Sobic008G161401--Sobic002G108800 Sobic008G161401--Sobic001G479500 Sobic007G073400--Sobic004G212800 Sobic004G164600 Sobic004G164600 Sobic007G073400--Sobic004G164600 Sobic004G076732 Sobic004G076732 Sobic007G073400--Sobic004G076732 Sobic008G009500 Sobic008G009500 Sobic007G073400--Sobic008G009500 Sobic009G113600 Sobic009G113600 Sobic007G073400--Sobic009G113600 Sobic008G031350 Sobic008G031350 Sobic007G073400--Sobic008G031350 Sobic008G042250 Sobic008G042250 Sobic007G073400--Sobic008G042250 Sobic005G110430 Sobic005G110430 Sobic007G073400--Sobic005G110430 Sobic007G073400--Sobic004G143700 Sobic001G024200 Sobic001G024200 Sobic007G211000--Sobic001G024200 Sobic004G112500 Sobic004G112500 Sobic007G211000--Sobic004G112500 Sobic010G124001 Sobic010G124001 Sobic007G211000--Sobic010G124001 Sobic003G117000 Sobic003G117000 Sobic007G211000--Sobic003G117000 Sobic001G272000 Sobic001G272000 Sobic007G211000--Sobic001G272000 Sobic001G243901 Sobic001G243901 Sobic007G211000--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic007G211000--Sobic005G117901 Sobic007G211000--Sobic004G212800 Sobic007G211000--Sobic010G248200 Sobic001G479500--Sobic003G057800 Sobic001G479500--Sobic005G130200 Sobic001G479500--Sobic010G248200 Sobic001G479500--Sobic008G161401 Sobic001G479500--Sobic009G156000 Sobic001G543900 Sobic001G543900 Sobic001G479500--Sobic001G543900 Sobic005G187200 Sobic005G187200 Sobic001G479500--Sobic005G187200 Sobic001G479500--Sobic002G283300 Sobic001G479500--Sobic004G212800 Sobic007G011400 Sobic007G011400 Sobic007G205800--Sobic007G011400 Sobic009G087800 Sobic009G087800 Sobic007G205800--Sobic009G087800 Sobic010G263800 Sobic010G263800 Sobic007G205800--Sobic010G263800 Sobic008G034600 Sobic008G034600 Sobic007G205800--Sobic008G034600 Sobic004G271900 Sobic004G271900 Sobic007G205800--Sobic004G271900 Sobic009G022200 Sobic009G022200 Sobic007G205800--Sobic009G022200 Sobic007G205800--Sobic003G093600 Sobic003G258400 Sobic003G258400 Sobic007G205800--Sobic003G258400 Sobic002G077200 Sobic002G077200 Sobic007G205800--Sobic002G077200 Sobic004G143700--Sobic007G073400 Sobic007G023700 Sobic007G023700 Sobic004G143700--Sobic007G023700 Sobic004G143700--Sobic004G212800 Sobic004G143700--Sobic002G283300 Sobic004G143700--Sobic010G248200 Sobic004G143700--Sobic001G024200 Sobic004G143700--Sobic003G093600 Sobic001G439500 Sobic001G439500 Sobic004G143700--Sobic001G439500 Sobic004G143700--Sobic001G543900 Sobic006G009400--Sobic010G263800 Sobic005G055150 Sobic005G055150 Sobic006G009400--Sobic005G055150 Sobic002G313300 Sobic002G313300 Sobic006G009400--Sobic002G313300 Sobic006G009400--Sobic001G543900 Sobic005G110427 Sobic005G110427 Sobic006G009400--Sobic005G110427 Sobic001G477800 Sobic001G477800 Sobic006G009400--Sobic001G477800 Sobic006G009400--Sobic007G073400 Sobic007G178700 Sobic007G178700 Sobic006G009400--Sobic007G178700 Sobic006G262200 Sobic006G262200 Sobic006G009400--Sobic006G262200 Sobic001G306000 Sobic001G306000 Sobic009G183200--Sobic001G306000 Sobic009G183200--Sobic005G028400 Sobic001G486300 Sobic001G486300 Sobic009G183200--Sobic001G486300 Sobic010G026400 Sobic010G026400 Sobic009G183200--Sobic010G026400 Sobic009G183200--Sobic007G205800 Sobic007G035600 Sobic007G035600 Sobic009G183200--Sobic007G035600 Sobic001G451000 Sobic001G451000 Sobic009G183200--Sobic001G451000 Sobic001G446900 Sobic001G446900 Sobic009G183200--Sobic001G446900 Sobic007G145200 Sobic007G145200 Sobic009G183200--Sobic007G145200
Octagon: transcription factors


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