Gene annotation
Transcriptome id Sobic.009G002700.1
Synonym Sb09g000460
Functional annotation serpin domain containing protein, putative, expressed
UniProt C5YXZ5
Pfam PF00079
Panther DB PTHR11461 PTHR11461:SF171
NCBI CDD KOG2392; Serpin
KEGG Orthology K13963; serpin B
Gene Ontology GO:0005615; extracellular space


Orthologs (automatic annotation)
TAIR AT1G47710 : Serine protease inhibitor (SERPIN) family protein
RAP-DB (Rice) LOC_Os03g41438.1 : serpin domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a017310
Brachypodium -
Barley -
Wheat TraesCS4B02G079200 , TraesCS4D02G078000 , TraesCS5A02G490400 , TraesCS4B02G321700 , TraesCS4D02G318300 , TraesCS4A02G235700
Populus PNT02856


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
2 Sobic.005G028400 "Ca ATPase, IIB type"(PubMedID : 22196357)@Autoihibited Ca2+ - ATPase 11(PubMedID : 26320239)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
3 Sobic.003G324000 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed K00074: paaH, hbd, fadB, 3-hydroxybutyryl-CoA dehydrogenase
4 Sobic.008G161401 - -
5 Sobic.005G187200 expressed protein -
6 Sobic.003G093600 methyltransferase, putative, expressed -
7 Sobic.001G479500 dihydroflavonol-4-reductase, putative, expressed K15891: NAD+-dependent farnesol dehydrogenase
8 Sobic.003G258400 splicing factor-related, putative, expressed -
9 Sobic.005G130200 - -
10 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
11 Sobic.009G022200 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
12 Sobic.007G037100 MYB family transcription factor, putative, expressed -
13 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
14 Sobic.009G198900 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
15 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
16 Sobic.004G271900 RMD5 homolog A, putative, expressed -
17 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
18 Sobic.010G199600 hydrolase, NUDIX family, domain containing protein, expressed -
19 Sobic.002G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
20 Sobic.007G035600 MSP domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G002700 Sobic009G002700 Sobic009G156000 Sobic009G156000 Sobic009G002700--Sobic009G156000 Sobic005G028400 Sobic005G028400 Sobic009G002700--Sobic005G028400 Sobic003G324000 Sobic003G324000 Sobic009G002700--Sobic003G324000 Sobic008G161401 Sobic008G161401 Sobic009G002700--Sobic008G161401 Sobic005G187200 Sobic005G187200 Sobic009G002700--Sobic005G187200 Sobic003G093600 Sobic003G093600 Sobic009G002700--Sobic003G093600 Sobic001G479500 Sobic001G479500 Sobic009G002700--Sobic001G479500 Sobic003G258400 Sobic003G258400 Sobic009G002700--Sobic003G258400 Sobic005G130200 Sobic005G130200 Sobic009G002700--Sobic005G130200 Sobic002G283300 Sobic002G283300 Sobic009G156000--Sobic002G283300 Sobic009G156000--Sobic005G028400 Sobic009G156000--Sobic003G093600 Sobic009G156000--Sobic008G161401 Sobic009G156000--Sobic005G130200 Sobic002G165300 Sobic002G165300 Sobic009G156000--Sobic002G165300 Sobic009G156000--Sobic001G479500 Sobic010G248200 Sobic010G248200 Sobic009G156000--Sobic010G248200 Sobic004G143700 Sobic004G143700 Sobic009G156000--Sobic004G143700 Sobic005G028400--Sobic009G156000 Sobic005G028400--Sobic008G161401 Sobic007G073400 Sobic007G073400 Sobic005G028400--Sobic007G073400 Sobic007G211000 Sobic007G211000 Sobic005G028400--Sobic007G211000 Sobic005G028400--Sobic001G479500 Sobic007G205800 Sobic007G205800 Sobic005G028400--Sobic007G205800 Sobic005G028400--Sobic004G143700 Sobic006G009400 Sobic006G009400 Sobic005G028400--Sobic006G009400 Sobic009G183200 Sobic009G183200 Sobic005G028400--Sobic009G183200 Sobic009G198900 Sobic009G198900 Sobic003G324000--Sobic009G198900 Sobic001G368400 Sobic001G368400 Sobic003G324000--Sobic001G368400 Sobic003G324000--Sobic005G187200 Sobic010G056200 Sobic010G056200 Sobic003G324000--Sobic010G056200 Sobic003G324000--Sobic001G479500 Sobic010G280100 Sobic010G280100 Sobic003G324000--Sobic010G280100 Sobic003G324000--Sobic007G205800 Sobic009G087800 Sobic009G087800 Sobic003G324000--Sobic009G087800 Sobic003G324000--Sobic003G258400 Sobic008G161401--Sobic010G248200 Sobic004G212800 Sobic004G212800 Sobic008G161401--Sobic004G212800 Sobic008G161401--Sobic007G073400 Sobic008G161401--Sobic005G130200 Sobic003G057800 Sobic003G057800 Sobic008G161401--Sobic003G057800 Sobic003G357500 Sobic003G357500 Sobic008G161401--Sobic003G357500 Sobic008G161401--Sobic009G156000 Sobic002G108800 Sobic002G108800 Sobic008G161401--Sobic002G108800 Sobic008G161401--Sobic001G479500 Sobic010G263800 Sobic010G263800 Sobic005G187200--Sobic010G263800 Sobic004G271900 Sobic004G271900 Sobic005G187200--Sobic004G271900 Sobic005G187200--Sobic001G479500 Sobic004G256600 Sobic004G256600 Sobic005G187200--Sobic004G256600 Sobic005G187200--Sobic007G205800 Sobic007G011400 Sobic007G011400 Sobic005G187200--Sobic007G011400 Sobic002G077200 Sobic002G077200 Sobic005G187200--Sobic002G077200 Sobic009G134500 Sobic009G134500 Sobic005G187200--Sobic009G134500 Sobic001G194900 Sobic001G194900 Sobic005G187200--Sobic001G194900 Sobic007G023700 Sobic007G023700 Sobic003G093600--Sobic007G023700 Sobic009G022200 Sobic009G022200 Sobic003G093600--Sobic009G022200 Sobic003G093600--Sobic004G271900 Sobic003G093600--Sobic007G205800 Sobic003G093600--Sobic004G143700 Sobic003G093600--Sobic009G156000 Sobic003G093600--Sobic009G087800 Sobic003G093600--Sobic003G258400 Sobic001G424700 Sobic001G424700 Sobic003G093600--Sobic001G424700 Sobic001G479500--Sobic003G057800 Sobic001G479500--Sobic005G130200 Sobic001G479500--Sobic010G248200 Sobic001G479500--Sobic008G161401 Sobic001G479500--Sobic009G156000 Sobic001G543900 Sobic001G543900 Sobic001G479500--Sobic001G543900 Sobic001G479500--Sobic005G187200 Sobic001G479500--Sobic002G283300 Sobic001G479500--Sobic004G212800 Sobic003G258400--Sobic002G077200 Sobic003G258400--Sobic004G256600 Sobic003G258400--Sobic009G087800 Sobic009G231300 Sobic009G231300 Sobic003G258400--Sobic009G231300 Sobic009G180200 Sobic009G180200 Sobic003G258400--Sobic009G180200 Sobic003G258400--Sobic004G271900 Sobic003G258400--Sobic007G205800 Sobic003G258400--Sobic003G093600 Sobic009G110366 Sobic009G110366 Sobic003G258400--Sobic009G110366 Sobic005G130200--Sobic010G248200 Sobic005G130200--Sobic001G479500 Sobic005G130200--Sobic001G543900 Sobic005G130200--Sobic008G161401 Sobic005G130200--Sobic009G156000 Sobic005G130200--Sobic002G283300 Sobic005G130200--Sobic004G212800 Sobic005G130200--Sobic003G057800 Sobic001G477800 Sobic001G477800 Sobic005G130200--Sobic001G477800
Octagon: transcription factors


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