Gene annotation
Transcriptome id Sobic.010G199600.1,Sobic.010G199600.2
Synonym ATNUDX2, NUDT2, Sb10g024820, ATNUDT2
Functional annotation hydrolase, NUDIX family, domain containing protein, expressed
UniProt A0A1W0VU04 , A0A1W0VU15
Pfam PF00293
Panther DB PTHR13994 PTHR13994:SF14
NCBI CDD KOG0648; Predicted NUDIX hydrolase FGF-2 and related proteins
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT5G47650 : nudix hydrolase homolog 2,nudix hydrolase homolog 10
RAP-DB (Rice) LOC_Os06g42790.1,LOC_Os06g42790.2 : hydrolase, NUDIX family, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a051450 , Zm00025a042090
Brachypodium KQK17583
Barley HORVU1Hr1G092040.1 , HORVU1Hr1G092040.2 , HORVU1Hr1G092040.3 , HORVU1Hr1G092040.6 , HORVU7Hr1G092370.2 , HORVU7Hr1G092370.4 , HORVU7Hr1G092370.5 , HORVU7Hr1G092370.6 , HORVU7Hr1G092370.7 , HORVU7Hr1G092370.8 , HORVU7Hr1G092370.9 , HORVU7Hr1G092370.10 , HORVU6Hr1G056560.1 , HORVU6Hr1G056560.2 , HORVU4Hr1G035950.1 , HORVU4Hr1G035950.2 , HORVU7Hr1G092370.3
Wheat TraesCS7B02G292100 , TraesCS7B02G292100 , TraesCS7D02G386100 , TraesCS7D02G386100
Populus -


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cDNA sequences
Sobic.010G199600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
2 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
3 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
4 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
5 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
6 Sobic.006G122400 uncharacterized glycosyltransferase, putative, expressed -
7 Sobic.010G026400 BUD13, putative, expressed K13106: BUD13, pre-mRNA-splicing factor CWC26
8 Sobic.007G037100 MYB family transcription factor, putative, expressed -
9 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
10 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
11 Sobic.005G028400 "Ca ATPase, IIB type"(PubMedID : 22196357)@Autoihibited Ca2+ - ATPase 11(PubMedID : 26320239)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
12 Sobic.007G026300 pre-mRNA-splicing factor SLU7, putative, expressed K12819: pre-mRNA-processing factor SLU7
13 Sobic.002G283300 protein kinase family protein, putative, expressed -
14 Sobic.003G093600 methyltransferase, putative, expressed -
15 Sobic.004G196700 expressed protein -
16 Sobic.003G324000 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed K00074: paaH, hbd, fadB, 3-hydroxybutyryl-CoA dehydrogenase
17 Sobic.005G187200 expressed protein -
18 Sobic.002G300400 serine/threonine-protein kinase CTR1, putative, expressed -
19 Sobic.008G041700 TLD family protein, putative, expressed -
20 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic010G199600 Sobic010G199600 Sobic002G165300 Sobic002G165300 Sobic010G199600--Sobic002G165300 Sobic009G156000 Sobic009G156000 Sobic010G199600--Sobic009G156000 Sobic007G078000 Sobic007G078000 Sobic010G199600--Sobic007G078000 Sobic005G149500 Sobic005G149500 Sobic010G199600--Sobic005G149500 Sobic002G284200 Sobic002G284200 Sobic010G199600--Sobic002G284200 Sobic006G122400 Sobic006G122400 Sobic010G199600--Sobic006G122400 Sobic010G026400 Sobic010G026400 Sobic010G199600--Sobic010G026400 Sobic007G037100 Sobic007G037100 Sobic010G199600--Sobic007G037100 Sobic006G209500 Sobic006G209500 Sobic010G199600--Sobic006G209500 Sobic002G165300--Sobic009G156000 Sobic004G196700 Sobic004G196700 Sobic002G165300--Sobic004G196700 Sobic002G165300--Sobic005G149500 Sobic007G211000 Sobic007G211000 Sobic002G165300--Sobic007G211000 Sobic002G165300--Sobic010G199600 Sobic002G165300--Sobic007G078000 Sobic002G165300--Sobic002G284200 Sobic002G165300--Sobic010G026400 Sobic002G165300--Sobic007G037100 Sobic002G283300 Sobic002G283300 Sobic009G156000--Sobic002G283300 Sobic005G028400 Sobic005G028400 Sobic009G156000--Sobic005G028400 Sobic003G093600 Sobic003G093600 Sobic009G156000--Sobic003G093600 Sobic008G161401 Sobic008G161401 Sobic009G156000--Sobic008G161401 Sobic005G130200 Sobic005G130200 Sobic009G156000--Sobic005G130200 Sobic009G156000--Sobic002G165300 Sobic001G479500 Sobic001G479500 Sobic009G156000--Sobic001G479500 Sobic010G248200 Sobic010G248200 Sobic009G156000--Sobic010G248200 Sobic004G143700 Sobic004G143700 Sobic009G156000--Sobic004G143700 Sobic003G333600 Sobic003G333600 Sobic007G078000--Sobic003G333600 Sobic007G078000--Sobic004G196700 Sobic007G185900 Sobic007G185900 Sobic007G078000--Sobic007G185900 Sobic010G260500 Sobic010G260500 Sobic007G078000--Sobic010G260500 Sobic001G424700 Sobic001G424700 Sobic007G078000--Sobic001G424700 Sobic007G078000--Sobic005G149500 Sobic001G372700 Sobic001G372700 Sobic007G078000--Sobic001G372700 Sobic001G451000 Sobic001G451000 Sobic007G078000--Sobic001G451000 Sobic006G082600 Sobic006G082600 Sobic007G078000--Sobic006G082600 Sobic003G187400 Sobic003G187400 Sobic005G149500--Sobic003G187400 Sobic002G157300 Sobic002G157300 Sobic005G149500--Sobic002G157300 Sobic009G040700 Sobic009G040700 Sobic005G149500--Sobic009G040700 Sobic005G149500--Sobic004G196700 Sobic007G011400 Sobic007G011400 Sobic005G149500--Sobic007G011400 Sobic006G060100 Sobic006G060100 Sobic005G149500--Sobic006G060100 Sobic005G149500--Sobic007G185900 Sobic007G137900 Sobic007G137900 Sobic005G149500--Sobic007G137900 Sobic005G149500--Sobic007G078000 Sobic003G117000 Sobic003G117000 Sobic002G284200--Sobic003G117000 Sobic007G150200 Sobic007G150200 Sobic002G284200--Sobic007G150200 Sobic002G284200--Sobic001G451000 Sobic002G284200--Sobic007G211000 Sobic002G284200--Sobic003G093600 Sobic002G284200--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic002G284200--Sobic001G439500 Sobic002G284200--Sobic002G165300 Sobic002G284200--Sobic002G283300 Sobic009G027000 Sobic009G027000 Sobic006G122400--Sobic009G027000 Sobic010G218100 Sobic010G218100 Sobic006G122400--Sobic010G218100 Sobic005G181000 Sobic005G181000 Sobic006G122400--Sobic005G181000 Sobic006G122400--Sobic002G284200 Sobic006G124900 Sobic006G124900 Sobic006G122400--Sobic006G124900 Sobic006G122400--Sobic002G165300 Sobic006G122400--Sobic007G078000 Sobic010G218500 Sobic010G218500 Sobic006G122400--Sobic010G218500 Sobic007G130600 Sobic007G130600 Sobic006G122400--Sobic007G130600 Sobic003G012500 Sobic003G012500 Sobic010G026400--Sobic003G012500 Sobic010G026400--Sobic002G157300 Sobic009G127900 Sobic009G127900 Sobic010G026400--Sobic009G127900 Sobic006G009400 Sobic006G009400 Sobic010G026400--Sobic006G009400 Sobic010G026400--Sobic007G011400 Sobic003G261300 Sobic003G261300 Sobic010G026400--Sobic003G261300 Sobic010G263800 Sobic010G263800 Sobic010G026400--Sobic010G263800 Sobic010G026400--Sobic005G149500 Sobic010G026400--Sobic003G187400 Sobic007G037100--Sobic006G082600 Sobic001G222300 Sobic001G222300 Sobic007G037100--Sobic001G222300 Sobic008G116500 Sobic008G116500 Sobic007G037100--Sobic008G116500 Sobic002G001600 Sobic002G001600 Sobic007G037100--Sobic002G001600 Sobic010G124001 Sobic010G124001 Sobic007G037100--Sobic010G124001 Sobic007G037100--Sobic007G211000 Sobic007G037100--Sobic007G078000 Sobic001G162300 Sobic001G162300 Sobic007G037100--Sobic001G162300 Sobic007G037100--Sobic002G283300 Sobic001G478300 Sobic001G478300 Sobic006G209500--Sobic001G478300 Sobic004G271900 Sobic004G271900 Sobic006G209500--Sobic004G271900 Sobic006G088100 Sobic006G088100 Sobic006G209500--Sobic006G088100 Sobic006G209500--Sobic003G093600 Sobic002G324200 Sobic002G324200 Sobic006G209500--Sobic002G324200 Sobic009G117400 Sobic009G117400 Sobic006G209500--Sobic009G117400 Sobic004G150400 Sobic004G150400 Sobic006G209500--Sobic004G150400 Sobic002G262600 Sobic002G262600 Sobic006G209500--Sobic002G262600 Sobic007G205800 Sobic007G205800 Sobic006G209500--Sobic007G205800
Octagon: transcription factors


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