Gene annotation
Transcriptome id Sobic.007G037900.1
Synonym Sb07g003220
Functional annotation oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed
UniProt C5YGS3
Pfam PF02894 PF01408
Panther DB PTHR22604 PTHR22604:SF123
NCBI CDD KOG2741; Dimeric dihydrodiol dehydrogenase
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G17370 : Oxidoreductase family protein
RAP-DB (Rice) LOC_Os08g05280.1 : oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed
MaizeGDB (Corn) Zm00025a055231
Brachypodium KQJ95501 , KQJ95500 , KQJ95502 , KQJ95499
Barley HORVU7Hr1G072750.10 , HORVU7Hr1G072750.1 , HORVU7Hr1G072750.3 , HORVU7Hr1G072750.4 , HORVU7Hr1G072750.5 , HORVU7Hr1G072750.6 , HORVU7Hr1G072750.7 , HORVU7Hr1G072750.8 , HORVU7Hr1G072750.9
Wheat TraesCS7A02G305900 , TraesCS7D02G302600 , TraesCS7B02G206100 , TraesCS7B02G206100 , TraesCS7A02G305900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G268300 surp module family protein, putative, expressed -
2 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
3 Sobic.006G246900 expressed protein -
4 Sobic.002G144933 - -
5 Sobic.001G274200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
6 Sobic.009G127900 - -
7 Sobic.001G162300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
8 Sobic.004G290800 GRAS family transcription factor(PubMedID : 23915383)@scarecrow, putative, expressed -
9 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
10 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
11 Sobic.010G124001 - -
12 Sobic.001G479500 dihydroflavonol-4-reductase, putative, expressed K15891: NAD+-dependent farnesol dehydrogenase
13 Sobic.009G140500 no apical meristem protein, putative, expressed -
14 Sobic.009G134500 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
15 Sobic.001G067850 - -
16 Sobic.001G477800 expressed protein -
17 Sobic.003G422300 recA protein, expressed K03553: recombination protein RecA
18 Sobic.007G178700 - -
19 Sobic.002G248400 ENT domain containing protein, expressed -
20 Sobic.007G054000 powdery mildew resistance protein PM3b, putative, expressed -


Gene co-expression network
sample Sobic007G037900 Sobic007G037900 Sobic003G268300 Sobic003G268300 Sobic007G037900--Sobic003G268300 Sobic001G420200 Sobic001G420200 Sobic007G037900--Sobic001G420200 Sobic006G246900 Sobic006G246900 Sobic007G037900--Sobic006G246900 Sobic002G144933 Sobic002G144933 Sobic007G037900--Sobic002G144933 Sobic001G274200 Sobic001G274200 Sobic007G037900--Sobic001G274200 Sobic009G127900 Sobic009G127900 Sobic007G037900--Sobic009G127900 Sobic001G162300 Sobic001G162300 Sobic007G037900--Sobic001G162300 Sobic004G290800 Sobic004G290800 Sobic007G037900--Sobic004G290800 Sobic002G157000 Sobic002G157000 Sobic007G037900--Sobic002G157000 Sobic007G096600 Sobic007G096600 Sobic003G268300--Sobic007G096600 Sobic003G268300--Sobic002G157000 Sobic003G268300--Sobic001G420200 Sobic003G200200 Sobic003G200200 Sobic003G268300--Sobic003G200200 Sobic002G248400 Sobic002G248400 Sobic003G268300--Sobic002G248400 Sobic003G268300--Sobic009G127900 Sobic007G178700 Sobic007G178700 Sobic003G268300--Sobic007G178700 Sobic003G268300--Sobic007G037900 Sobic008G173900 Sobic008G173900 Sobic003G268300--Sobic008G173900 Sobic001G420200--Sobic001G274200 Sobic001G420200--Sobic002G157000 Sobic001G420200--Sobic003G268300 Sobic001G420200--Sobic008G173900 Sobic001G420200--Sobic002G248400 Sobic001G420200--Sobic007G096600 Sobic001G420200--Sobic007G037900 Sobic001G420200--Sobic002G144933 Sobic001G420200--Sobic007G178700 Sobic006G246900--Sobic001G162300 Sobic006G246900--Sobic003G268300 Sobic006G246900--Sobic007G037900 Sobic001G094000 Sobic001G094000 Sobic006G246900--Sobic001G094000 Sobic006G246900--Sobic002G157000 Sobic009G134500 Sobic009G134500 Sobic006G246900--Sobic009G134500 Sobic008G063000 Sobic008G063000 Sobic006G246900--Sobic008G063000 Sobic001G477800 Sobic001G477800 Sobic006G246900--Sobic001G477800 Sobic007G011400 Sobic007G011400 Sobic006G246900--Sobic007G011400 Sobic002G144933--Sobic008G173900 Sobic002G144933--Sobic002G157000 Sobic002G144933--Sobic001G420200 Sobic002G144933--Sobic003G268300 Sobic002G144933--Sobic001G274200 Sobic002G144933--Sobic007G037900 Sobic004G145500 Sobic004G145500 Sobic002G144933--Sobic004G145500 Sobic003G170100 Sobic003G170100 Sobic002G144933--Sobic003G170100 Sobic009G065100 Sobic009G065100 Sobic002G144933--Sobic009G065100 Sobic001G274200--Sobic001G420200 Sobic001G274200--Sobic007G096600 Sobic001G274200--Sobic003G268300 Sobic001G274200--Sobic008G173900 Sobic001G274200--Sobic002G144933 Sobic001G133466 Sobic001G133466 Sobic001G274200--Sobic001G133466 Sobic001G274200--Sobic007G037900 Sobic002G243900 Sobic002G243900 Sobic001G274200--Sobic002G243900 Sobic010G123901 Sobic010G123901 Sobic001G274200--Sobic010G123901 Sobic009G127900--Sobic007G178700 Sobic009G127900--Sobic003G268300 Sobic001G446900 Sobic001G446900 Sobic009G127900--Sobic001G446900 Sobic006G066650 Sobic006G066650 Sobic009G127900--Sobic006G066650 Sobic009G127900--Sobic004G290800 Sobic010G026400 Sobic010G026400 Sobic009G127900--Sobic010G026400 Sobic009G127900--Sobic007G037900 Sobic009G127900--Sobic008G173900 Sobic001G111900 Sobic001G111900 Sobic009G127900--Sobic001G111900 Sobic001G162300--Sobic002G157000 Sobic001G162300--Sobic006G246900 Sobic001G162300--Sobic003G268300 Sobic001G162300--Sobic007G178700 Sobic006G082600 Sobic006G082600 Sobic001G162300--Sobic006G082600 Sobic001G162300--Sobic007G011400 Sobic001G162300--Sobic001G094000 Sobic001G162300--Sobic003G170100 Sobic001G162300--Sobic001G477800 Sobic004G290800--Sobic009G127900 Sobic004G290800--Sobic001G420200 Sobic004G290800--Sobic007G178700 Sobic004G290800--Sobic007G037900 Sobic004G290800--Sobic003G268300 Sobic004G290800--Sobic001G162300 Sobic004G290800--Sobic002G157000 Sobic004G290800--Sobic001G111900 Sobic004G290800--Sobic001G446900 Sobic002G157000--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic002G157000--Sobic002G320500 Sobic002G157000--Sobic003G200200 Sobic002G157000--Sobic001G420200 Sobic002G157000--Sobic008G173900 Sobic002G157000--Sobic003G268300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic002G157000--Sobic001G094000
Octagon: transcription factors


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