Gene annotation
Transcriptome id Sobic.009G134500.1,Sobic.009G134500.2,Sobic.009G134500.3
Synonym Sb09g020070
Functional annotation WD domain, G-beta repeat domain containing protein, expressed
UniProt A0A1B6P896 , Q1KSB2 , A0A1B6P891
Pfam PF00400
Panther DB PTHR19847 PTHR19847:SF9
NCBI CDD KOG0266; WD40 repeat-containing protein
KEGG Orthology K11801; DDB1- and CUL4-associated factor 11
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G03020 : transducin family protein / WD-40 repeat family protein
RAP-DB (Rice) LOC_Os05g33710.1 : WD domain, G-beta repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a037469
Brachypodium -
Barley HORVU1Hr1G060850.20 , HORVU1Hr1G060850.29 , HORVU1Hr1G060850.28 , HORVU1Hr1G060850.23 , HORVU1Hr1G060850.27 , HORVU1Hr1G060850.26 , HORVU1Hr1G060850.8 , HORVU1Hr1G060850.9 , HORVU1Hr1G060850.6 , HORVU1Hr1G060850.7 , HORVU1Hr1G060850.4 , HORVU1Hr1G060850.5 , HORVU1Hr1G060850.2 , HORVU1Hr1G060850.3 , HORVU1Hr1G060850.1 , HORVU1Hr1G060850.36 , HORVU1Hr1G060850.39 , HORVU1Hr1G060850.37 , HORVU1Hr1G060850.32 , HORVU1Hr1G060850.33 , HORVU1Hr1G060850.31 , HORVU1Hr1G060850.42 , HORVU1Hr1G060850.41 , HORVU1Hr1G060850.40 , HORVU1Hr1G060850.38 , HORVU1Hr1G060850.30 , HORVU1Hr1G060850.14 , HORVU1Hr1G060850.17 , HORVU1Hr1G060850.10 , HORVU1Hr1G060850.11 , HORVU1Hr1G060850.12 , HORVU1Hr1G060850.13 , HORVU1Hr1G060850.19
Wheat TraesCS1B02G263400 , TraesCS1B02G263400 , TraesCS1D02G254400 , TraesCS1A02G255000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G246900 expressed protein -
2 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
3 Sobic.009G127900 - -
4 Sobic.001G162300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
5 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
6 Sobic.008G041700 TLD family protein, putative, expressed -
7 Sobic.005G187200 expressed protein -
8 Sobic.007G037900 oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed -
9 Sobic.007G178700 - -
10 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
11 Sobic.005G023900 expressed protein -
12 Sobic.001G497300 protein kinase domain containing protein, expressed -
13 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
14 Sobic.003G268300 surp module family protein, putative, expressed -
15 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
16 Sobic.010G026400 BUD13, putative, expressed K13106: BUD13, pre-mRNA-splicing factor CWC26
17 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
18 Sobic.006G009400 G-patch domain containing protein, expressed -
19 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
20 Sobic.004G196700 expressed protein -


Gene co-expression network
sample Sobic009G134500 Sobic009G134500 Sobic006G246900 Sobic006G246900 Sobic009G134500--Sobic006G246900 Sobic006G082600 Sobic006G082600 Sobic009G134500--Sobic006G082600 Sobic009G127900 Sobic009G127900 Sobic009G134500--Sobic009G127900 Sobic001G162300 Sobic001G162300 Sobic009G134500--Sobic001G162300 Sobic002G157000 Sobic002G157000 Sobic009G134500--Sobic002G157000 Sobic008G041700 Sobic008G041700 Sobic009G134500--Sobic008G041700 Sobic005G187200 Sobic005G187200 Sobic009G134500--Sobic005G187200 Sobic007G037900 Sobic007G037900 Sobic009G134500--Sobic007G037900 Sobic007G178700 Sobic007G178700 Sobic009G134500--Sobic007G178700 Sobic006G246900--Sobic001G162300 Sobic003G268300 Sobic003G268300 Sobic006G246900--Sobic003G268300 Sobic006G246900--Sobic007G037900 Sobic001G094000 Sobic001G094000 Sobic006G246900--Sobic001G094000 Sobic006G246900--Sobic002G157000 Sobic006G246900--Sobic009G134500 Sobic008G063000 Sobic008G063000 Sobic006G246900--Sobic008G063000 Sobic001G477800 Sobic001G477800 Sobic006G246900--Sobic001G477800 Sobic007G011400 Sobic007G011400 Sobic006G246900--Sobic007G011400 Sobic006G082600--Sobic001G162300 Sobic006G082600--Sobic007G178700 Sobic007G037100 Sobic007G037100 Sobic006G082600--Sobic007G037100 Sobic001G251700 Sobic001G251700 Sobic006G082600--Sobic001G251700 Sobic004G196700 Sobic004G196700 Sobic006G082600--Sobic004G196700 Sobic006G082600--Sobic009G134500 Sobic010G124001 Sobic010G124001 Sobic006G082600--Sobic010G124001 Sobic006G082600--Sobic009G127900 Sobic006G082600--Sobic002G157000 Sobic009G127900--Sobic007G178700 Sobic009G127900--Sobic003G268300 Sobic001G446900 Sobic001G446900 Sobic009G127900--Sobic001G446900 Sobic006G066650 Sobic006G066650 Sobic009G127900--Sobic006G066650 Sobic004G290800 Sobic004G290800 Sobic009G127900--Sobic004G290800 Sobic010G026400 Sobic010G026400 Sobic009G127900--Sobic010G026400 Sobic009G127900--Sobic007G037900 Sobic008G173900 Sobic008G173900 Sobic009G127900--Sobic008G173900 Sobic001G111900 Sobic001G111900 Sobic009G127900--Sobic001G111900 Sobic001G162300--Sobic002G157000 Sobic001G162300--Sobic006G246900 Sobic001G162300--Sobic003G268300 Sobic001G162300--Sobic007G178700 Sobic001G162300--Sobic006G082600 Sobic001G162300--Sobic007G011400 Sobic001G162300--Sobic001G094000 Sobic003G170100 Sobic003G170100 Sobic001G162300--Sobic003G170100 Sobic001G162300--Sobic001G477800 Sobic002G248400 Sobic002G248400 Sobic002G157000--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic002G157000--Sobic002G320500 Sobic003G200200 Sobic003G200200 Sobic002G157000--Sobic003G200200 Sobic001G420200 Sobic001G420200 Sobic002G157000--Sobic001G420200 Sobic002G157000--Sobic008G173900 Sobic002G157000--Sobic003G268300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic002G157000--Sobic001G094000 Sobic008G041700--Sobic009G134500 Sobic010G264100 Sobic010G264100 Sobic008G041700--Sobic010G264100 Sobic008G041700--Sobic007G011400 Sobic008G041700--Sobic005G187200 Sobic005G149500 Sobic005G149500 Sobic008G041700--Sobic005G149500 Sobic002G283300 Sobic002G283300 Sobic008G041700--Sobic002G283300 Sobic007G137900 Sobic007G137900 Sobic008G041700--Sobic007G137900 Sobic010G263800 Sobic010G263800 Sobic008G041700--Sobic010G263800 Sobic008G041700--Sobic010G026400 Sobic005G187200--Sobic010G263800 Sobic004G271900 Sobic004G271900 Sobic005G187200--Sobic004G271900 Sobic001G479500 Sobic001G479500 Sobic005G187200--Sobic001G479500 Sobic004G256600 Sobic004G256600 Sobic005G187200--Sobic004G256600 Sobic007G205800 Sobic007G205800 Sobic005G187200--Sobic007G205800 Sobic005G187200--Sobic007G011400 Sobic002G077200 Sobic002G077200 Sobic005G187200--Sobic002G077200 Sobic005G187200--Sobic009G134500 Sobic001G194900 Sobic001G194900 Sobic005G187200--Sobic001G194900 Sobic007G037900--Sobic003G268300 Sobic007G037900--Sobic001G420200 Sobic007G037900--Sobic006G246900 Sobic002G144933 Sobic002G144933 Sobic007G037900--Sobic002G144933 Sobic001G274200 Sobic001G274200 Sobic007G037900--Sobic001G274200 Sobic007G037900--Sobic009G127900 Sobic007G037900--Sobic001G162300 Sobic007G037900--Sobic004G290800 Sobic007G037900--Sobic002G157000 Sobic007G178700--Sobic009G127900 Sobic007G178700--Sobic003G268300 Sobic002G243900 Sobic002G243900 Sobic007G178700--Sobic002G243900 Sobic003G087400 Sobic003G087400 Sobic007G178700--Sobic003G087400 Sobic004G007100 Sobic004G007100 Sobic007G178700--Sobic004G007100 Sobic007G178700--Sobic001G162300 Sobic007G178700--Sobic001G446900 Sobic005G144400 Sobic005G144400 Sobic007G178700--Sobic005G144400 Sobic007G178700--Sobic001G420200
Octagon: transcription factors


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