Gene annotation
Transcriptome id Sobic.009G180200.2
Synonym Sb09g024060, AKINBETA1
Functional annotation SNF1-related protein kinase regulatory subunit beta-1, putative, expressed
UniProt C5Z085
Pfam PF04739 PF16561
Panther DB PTHR10343 PTHR10343:SF51
NCBI CDD KOG1616; Protein involved in Snf1 protein kinase complex assembly
KEGG Orthology K07199; 5'-AMP-activated protein kinase, regulatory beta subunit
Gene Ontology GO:0005515; protein binding GO:0009744response to sucrose


Orthologs (automatic annotation)
TAIR AT5G21170 : 5\'-AMP-activated protein kinase beta-2 subunit protein
RAP-DB (Rice) LOC_Os05g41220.1 : SNF1-related protein kinase regulatory subunit beta-1, putative, expressed
MaizeGDB (Corn) Zm00025a037846
Brachypodium -
Barley HORVU1Hr1G068430.1 , HORVU1Hr1G068430.2 , HORVU1Hr1G068430.3 , HORVU1Hr1G068430.4
Wheat TraesCS1A02G308900 , TraesCS1D02G308200
Populus -


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cDNA sequences
Sobic.009G180200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G199600 DUF581 domain containing protein, expressed -
2 Sobic.001G363100 universal stress protein domain containing protein, putative, expressed -
3 Sobic.009G109450 - -
4 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.007G023700 MA3 domain containing protein, expressed -
6 Sobic.009G231300 drought induced 19 protein, putative, expressed -
7 Sobic.005G130100 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
8 Sobic.003G258400 splicing factor-related, putative, expressed -
9 Sobic.005G121800 expressed protein -
10 Sobic.002G376800 EF hand family protein, putative -
11 Sobic.002G039500 expressed protein -
12 Sobic.010G050600 - -
13 Sobic.009G110366 - -
14 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
15 Sobic.007G156500 alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
16 Sobic.002G108800 auxin efflux carrier component, putative, expressed -
17 Sobic.006G196000 expressed protein -
18 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
19 Sobic.004G221900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
20 Sobic.010G146200 homeobox associated leucine zipper, putative, expressed -


Gene co-expression network
sample Sobic009G180200 Sobic009G180200 Sobic004G199600 Sobic004G199600 Sobic009G180200--Sobic004G199600 Sobic001G363100 Sobic001G363100 Sobic009G180200--Sobic001G363100 Sobic009G109450 Sobic009G109450 Sobic009G180200--Sobic009G109450 Sobic009G078500 Sobic009G078500 Sobic009G180200--Sobic009G078500 Sobic007G023700 Sobic007G023700 Sobic009G180200--Sobic007G023700 Sobic009G231300 Sobic009G231300 Sobic009G180200--Sobic009G231300 Sobic005G130100 Sobic005G130100 Sobic009G180200--Sobic005G130100 Sobic003G258400 Sobic003G258400 Sobic009G180200--Sobic003G258400 Sobic005G121800 Sobic005G121800 Sobic009G180200--Sobic005G121800 Sobic004G199600--Sobic009G078500 Sobic004G199600--Sobic009G109450 Sobic004G199600--Sobic009G180200 Sobic004G199600--Sobic005G130100 Sobic004G199600--Sobic009G231300 Sobic010G146200 Sobic010G146200 Sobic004G199600--Sobic010G146200 Sobic004G199600--Sobic001G363100 Sobic004G199600--Sobic005G121800 Sobic007G189800 Sobic007G189800 Sobic004G199600--Sobic007G189800 Sobic001G363100--Sobic009G180200 Sobic005G003200 Sobic005G003200 Sobic001G363100--Sobic005G003200 Sobic006G249000 Sobic006G249000 Sobic001G363100--Sobic006G249000 Sobic001G363100--Sobic009G078500 Sobic001G363100--Sobic004G199600 Sobic001G363100--Sobic005G130100 Sobic001G363100--Sobic010G146200 Sobic005G085600 Sobic005G085600 Sobic001G363100--Sobic005G085600 Sobic004G221900 Sobic004G221900 Sobic001G363100--Sobic004G221900 Sobic009G109450--Sobic009G078500 Sobic009G109450--Sobic004G199600 Sobic009G109450--Sobic009G180200 Sobic009G109450--Sobic005G130100 Sobic009G109450--Sobic009G231300 Sobic006G196000 Sobic006G196000 Sobic009G109450--Sobic006G196000 Sobic009G109450--Sobic005G121800 Sobic002G376900 Sobic002G376900 Sobic009G109450--Sobic002G376900 Sobic009G110366 Sobic009G110366 Sobic009G109450--Sobic009G110366 Sobic009G078500--Sobic004G199600 Sobic009G078500--Sobic005G130100 Sobic009G078500--Sobic009G109450 Sobic009G078500--Sobic009G180200 Sobic009G078500--Sobic009G231300 Sobic009G078500--Sobic010G146200 Sobic009G078500--Sobic001G363100 Sobic009G064766 Sobic009G064766 Sobic009G078500--Sobic009G064766 Sobic003G176100 Sobic003G176100 Sobic009G078500--Sobic003G176100 Sobic003G093600 Sobic003G093600 Sobic007G023700--Sobic003G093600 Sobic002G039500 Sobic002G039500 Sobic007G023700--Sobic002G039500 Sobic007G023700--Sobic009G180200 Sobic004G143700 Sobic004G143700 Sobic007G023700--Sobic004G143700 Sobic002G108800 Sobic002G108800 Sobic007G023700--Sobic002G108800 Sobic002G221900 Sobic002G221900 Sobic007G023700--Sobic002G221900 Sobic007G156500 Sobic007G156500 Sobic007G023700--Sobic007G156500 Sobic001G347600 Sobic001G347600 Sobic007G023700--Sobic001G347600 Sobic006G184300 Sobic006G184300 Sobic007G023700--Sobic006G184300 Sobic009G231300--Sobic005G130100 Sobic009G231300--Sobic009G180200 Sobic009G231300--Sobic009G109450 Sobic009G231300--Sobic009G078500 Sobic009G231300--Sobic007G156500 Sobic009G231300--Sobic005G003200 Sobic009G231300--Sobic003G258400 Sobic009G231300--Sobic004G199600 Sobic010G050600 Sobic010G050600 Sobic009G231300--Sobic010G050600 Sobic005G130100--Sobic009G078500 Sobic005G130100--Sobic009G231300 Sobic005G130100--Sobic010G146200 Sobic005G130100--Sobic004G199600 Sobic005G130100--Sobic009G109450 Sobic005G130100--Sobic009G180200 Sobic005G130100--Sobic010G050600 Sobic005G130100--Sobic005G003200 Sobic005G130100--Sobic006G249000 Sobic002G077200 Sobic002G077200 Sobic003G258400--Sobic002G077200 Sobic004G256600 Sobic004G256600 Sobic003G258400--Sobic004G256600 Sobic009G087800 Sobic009G087800 Sobic003G258400--Sobic009G087800 Sobic003G258400--Sobic009G231300 Sobic003G258400--Sobic009G180200 Sobic004G271900 Sobic004G271900 Sobic003G258400--Sobic004G271900 Sobic007G205800 Sobic007G205800 Sobic003G258400--Sobic007G205800 Sobic003G258400--Sobic003G093600 Sobic003G258400--Sobic009G110366 Sobic005G121800--Sobic002G376900 Sobic005G121800--Sobic009G109450 Sobic005G121800--Sobic009G180200 Sobic002G376800 Sobic002G376800 Sobic005G121800--Sobic002G376800 Sobic005G121800--Sobic004G199600 Sobic005G121800--Sobic003G258400 Sobic005G121800--Sobic009G078500 Sobic005G121800--Sobic009G110366 Sobic006G273100 Sobic006G273100 Sobic005G121800--Sobic006G273100
Octagon: transcription factors


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