Gene annotation
Transcriptome id Sobic.002G108800.1
Synonym
Functional annotation auxin efflux carrier component, putative, expressed
UniProt A0A1B6QAG8
Pfam PF03547
Panther DB PTHR31651 PTHR31651:SF3
NCBI CDD KOG2722; Predicted membrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G65980 : Auxin efflux carrier family protein
RAP-DB (Rice) LOC_Os09g38130.1 : auxin efflux carrier component, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS6B02G466900 , TraesCS6A02G421200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G156500 alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
2 Sobic.002G007250 - -
3 Sobic.001G345333 - -
4 Sobic.002G253500 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
5 Sobic.010G248200 KID-containing protein, putative, expressed -
6 Sobic.004G212800 - -
7 Sobic.002G039500 expressed protein -
8 Sobic.007G023700 MA3 domain containing protein, expressed -
9 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
10 Sobic.008G161401 - -
11 Sobic.008G031350 - -
12 Sobic.002G221900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
13 Sobic.008G009500 pentatricopeptide, putative, expressed -
14 Sobic.010G050600 - -
15 Sobic.006G184300 OsFBX148 - F-box domain containing protein, expressed -
16 Sobic.001G243901 - -
17 Sobic.004G164600 - -
18 Sobic.010G218500 bZIP transcription factor domain containing protein, expressed -
19 Sobic.002G283300 protein kinase family protein, putative, expressed -
20 Sobic.K024000 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha


Gene co-expression network
sample Sobic002G108800 Sobic002G108800 Sobic007G156500 Sobic007G156500 Sobic002G108800--Sobic007G156500 Sobic002G007250 Sobic002G007250 Sobic002G108800--Sobic002G007250 Sobic001G345333 Sobic001G345333 Sobic002G108800--Sobic001G345333 Sobic002G253500 Sobic002G253500 Sobic002G108800--Sobic002G253500 Sobic010G248200 Sobic010G248200 Sobic002G108800--Sobic010G248200 Sobic004G212800 Sobic004G212800 Sobic002G108800--Sobic004G212800 Sobic002G039500 Sobic002G039500 Sobic002G108800--Sobic002G039500 Sobic007G023700 Sobic007G023700 Sobic002G108800--Sobic007G023700 Sobic007G073400 Sobic007G073400 Sobic002G108800--Sobic007G073400 Sobic007G156500--Sobic002G108800 Sobic007G156500--Sobic002G253500 Sobic009G231300 Sobic009G231300 Sobic007G156500--Sobic009G231300 Sobic007G156500--Sobic002G007250 Sobic007G156500--Sobic010G248200 Sobic007G156500--Sobic002G039500 Sobic007G156500--Sobic001G345333 Sobic007G156500--Sobic007G023700 Sobic008G161401 Sobic008G161401 Sobic007G156500--Sobic008G161401 Sobic002G007250--Sobic001G345333 Sobic002G007250--Sobic010G248200 Sobic002G007250--Sobic002G108800 Sobic002G007250--Sobic004G212800 Sobic001G243901 Sobic001G243901 Sobic002G007250--Sobic001G243901 Sobic004G164600 Sobic004G164600 Sobic002G007250--Sobic004G164600 Sobic002G007250--Sobic007G073400 Sobic002G007250--Sobic002G253500 Sobic008G042250 Sobic008G042250 Sobic002G007250--Sobic008G042250 Sobic001G345333--Sobic002G007250 Sobic001G345333--Sobic002G108800 Sobic001G345333--Sobic001G243901 Sobic001G345333--Sobic004G212800 Sobic001G345333--Sobic010G248200 Sobic001G345333--Sobic004G164600 Sobic001G345333--Sobic007G073400 Sobic001G345333--Sobic002G253500 Sobic001G345333--Sobic008G042250 Sobic002G253500--Sobic010G248200 Sobic002G253500--Sobic002G108800 Sobic002G253500--Sobic007G156500 Sobic002G253500--Sobic002G039500 Sobic002G253500--Sobic001G345333 Sobic002G253500--Sobic002G007250 Sobic002G253500--Sobic004G212800 Sobic010G218500 Sobic010G218500 Sobic002G253500--Sobic010G218500 Sobic002G253500--Sobic008G161401 Sobic010G248200--Sobic002G007250 Sobic010G248200--Sobic001G345333 Sobic010G248200--Sobic004G212800 Sobic005G130200 Sobic005G130200 Sobic010G248200--Sobic005G130200 Sobic010G248200--Sobic002G253500 Sobic010G248200--Sobic008G161401 Sobic010G248200--Sobic002G108800 Sobic010G248200--Sobic001G243901 Sobic010G248200--Sobic010G218500 Sobic004G212800--Sobic007G073400 Sobic004G212800--Sobic004G164600 Sobic001G024200 Sobic001G024200 Sobic004G212800--Sobic001G024200 Sobic004G212800--Sobic001G345333 Sobic004G212800--Sobic002G007250 Sobic004G212800--Sobic010G248200 Sobic004G076732 Sobic004G076732 Sobic004G212800--Sobic004G076732 Sobic004G212800--Sobic008G161401 Sobic004G112500 Sobic004G112500 Sobic004G212800--Sobic004G112500 Sobic002G039500--Sobic002G253500 Sobic002G039500--Sobic007G023700 Sobic002G039500--Sobic002G108800 Sobic002G039500--Sobic007G156500 Sobic002G221900 Sobic002G221900 Sobic002G039500--Sobic002G221900 Sobic002G039500--Sobic004G212800 Sobic002G039500--Sobic009G231300 Sobic003G044900 Sobic003G044900 Sobic002G039500--Sobic003G044900 Sobic002G039500--Sobic007G073400 Sobic003G093600 Sobic003G093600 Sobic007G023700--Sobic003G093600 Sobic007G023700--Sobic002G039500 Sobic009G180200 Sobic009G180200 Sobic007G023700--Sobic009G180200 Sobic004G143700 Sobic004G143700 Sobic007G023700--Sobic004G143700 Sobic007G023700--Sobic002G108800 Sobic007G023700--Sobic002G221900 Sobic007G023700--Sobic007G156500 Sobic001G347600 Sobic001G347600 Sobic007G023700--Sobic001G347600 Sobic006G184300 Sobic006G184300 Sobic007G023700--Sobic006G184300 Sobic007G073400--Sobic004G212800 Sobic007G073400--Sobic004G164600 Sobic007G073400--Sobic004G076732 Sobic008G009500 Sobic008G009500 Sobic007G073400--Sobic008G009500 Sobic009G113600 Sobic009G113600 Sobic007G073400--Sobic009G113600 Sobic008G031350 Sobic008G031350 Sobic007G073400--Sobic008G031350 Sobic007G073400--Sobic008G042250 Sobic005G110430 Sobic005G110430 Sobic007G073400--Sobic005G110430 Sobic007G073400--Sobic004G143700
Octagon: transcription factors


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