Gene annotation
Transcriptome id Sobic.002G253500.1
Synonym Sb02g028910
Functional annotation FAD dependent oxidoreductase domain containing protein, expressed
UniProt C5X4K6
Pfam PF12831
Panther DB PTHR10961 PTHR10961:SF22
NCBI CDD KOG2820; FAD-dependent oxidoreductase
KEGG Orthology K00306; sarcosine oxidase / L-pipecolate oxidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G24580 : FAD-dependent oxidoreductase family protein
RAP-DB (Rice) LOC_Os09g32290.2 : FAD dependent oxidoreductase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a023879 , Zm00025a047510
Brachypodium KQK04148 , KQJ90854
Barley HORVU2Hr1G024130.1 , HORVU5Hr1G074820.3 , HORVU5Hr1G074820.2 , HORVU5Hr1G074820.1 , HORVU5Hr1G074820.6 , HORVU5Hr1G074820.4 , HORVU5Hr1G074820.5 , HORVU5Hr1G074900.1
Wheat TraesCS5B02G276000 , TraesCS5B02G275600 , TraesCS5D02G283800 , TraesCS5A02G276400 , TraesCS5D02G283800 , TraesCS5D02G283600 , TraesCS5D02G283600 , TraesCS5A02G276300 , TraesCS5A02G276300 , TraesCS5A02G276200 , TraesCS5A02G276200 , TraesCS5A02G276200 , TraesCS5B02G275700 , TraesCS5B02G275700
Populus -


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cDNA sequences
Sobic.002G253500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G248200 KID-containing protein, putative, expressed -
2 Sobic.002G108800 auxin efflux carrier component, putative, expressed -
3 Sobic.007G156500 alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
4 Sobic.002G039500 expressed protein -
5 Sobic.001G345333 - -
6 Sobic.002G007250 - -
7 Sobic.004G212800 - -
8 Sobic.010G218500 bZIP transcription factor domain containing protein, expressed -
9 Sobic.008G161401 - -
10 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
11 Sobic.007G023700 MA3 domain containing protein, expressed -
12 Sobic.002G221900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
13 Sobic.001G243901 - -
14 Sobic.009G231300 drought induced 19 protein, putative, expressed -
15 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
16 Sobic.005G130200 - -
17 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
18 Sobic.004G164600 - -
19 Sobic.003G204000 expressed protein -
20 Sobic.008G009500 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic002G253500 Sobic002G253500 Sobic010G248200 Sobic010G248200 Sobic002G253500--Sobic010G248200 Sobic002G108800 Sobic002G108800 Sobic002G253500--Sobic002G108800 Sobic007G156500 Sobic007G156500 Sobic002G253500--Sobic007G156500 Sobic002G039500 Sobic002G039500 Sobic002G253500--Sobic002G039500 Sobic001G345333 Sobic001G345333 Sobic002G253500--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic002G253500--Sobic002G007250 Sobic004G212800 Sobic004G212800 Sobic002G253500--Sobic004G212800 Sobic010G218500 Sobic010G218500 Sobic002G253500--Sobic010G218500 Sobic008G161401 Sobic008G161401 Sobic002G253500--Sobic008G161401 Sobic010G248200--Sobic002G007250 Sobic010G248200--Sobic001G345333 Sobic010G248200--Sobic004G212800 Sobic005G130200 Sobic005G130200 Sobic010G248200--Sobic005G130200 Sobic010G248200--Sobic002G253500 Sobic010G248200--Sobic008G161401 Sobic010G248200--Sobic002G108800 Sobic001G243901 Sobic001G243901 Sobic010G248200--Sobic001G243901 Sobic010G248200--Sobic010G218500 Sobic002G108800--Sobic007G156500 Sobic002G108800--Sobic002G007250 Sobic002G108800--Sobic001G345333 Sobic002G108800--Sobic002G253500 Sobic002G108800--Sobic010G248200 Sobic002G108800--Sobic004G212800 Sobic002G108800--Sobic002G039500 Sobic007G023700 Sobic007G023700 Sobic002G108800--Sobic007G023700 Sobic007G073400 Sobic007G073400 Sobic002G108800--Sobic007G073400 Sobic007G156500--Sobic002G108800 Sobic007G156500--Sobic002G253500 Sobic009G231300 Sobic009G231300 Sobic007G156500--Sobic009G231300 Sobic007G156500--Sobic002G007250 Sobic007G156500--Sobic010G248200 Sobic007G156500--Sobic002G039500 Sobic007G156500--Sobic001G345333 Sobic007G156500--Sobic007G023700 Sobic007G156500--Sobic008G161401 Sobic002G039500--Sobic002G253500 Sobic002G039500--Sobic007G023700 Sobic002G039500--Sobic002G108800 Sobic002G039500--Sobic007G156500 Sobic002G221900 Sobic002G221900 Sobic002G039500--Sobic002G221900 Sobic002G039500--Sobic004G212800 Sobic002G039500--Sobic009G231300 Sobic003G044900 Sobic003G044900 Sobic002G039500--Sobic003G044900 Sobic002G039500--Sobic007G073400 Sobic001G345333--Sobic002G007250 Sobic001G345333--Sobic002G108800 Sobic001G345333--Sobic001G243901 Sobic001G345333--Sobic004G212800 Sobic001G345333--Sobic010G248200 Sobic004G164600 Sobic004G164600 Sobic001G345333--Sobic004G164600 Sobic001G345333--Sobic007G073400 Sobic001G345333--Sobic002G253500 Sobic008G042250 Sobic008G042250 Sobic001G345333--Sobic008G042250 Sobic002G007250--Sobic001G345333 Sobic002G007250--Sobic010G248200 Sobic002G007250--Sobic002G108800 Sobic002G007250--Sobic004G212800 Sobic002G007250--Sobic001G243901 Sobic002G007250--Sobic004G164600 Sobic002G007250--Sobic007G073400 Sobic002G007250--Sobic002G253500 Sobic002G007250--Sobic008G042250 Sobic004G212800--Sobic007G073400 Sobic004G212800--Sobic004G164600 Sobic001G024200 Sobic001G024200 Sobic004G212800--Sobic001G024200 Sobic004G212800--Sobic001G345333 Sobic004G212800--Sobic002G007250 Sobic004G212800--Sobic010G248200 Sobic004G076732 Sobic004G076732 Sobic004G212800--Sobic004G076732 Sobic004G212800--Sobic008G161401 Sobic004G112500 Sobic004G112500 Sobic004G212800--Sobic004G112500 Sobic010G218500--Sobic010G248200 Sobic010G218500--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic010G218500--Sobic005G117901 Sobic010G218500--Sobic002G253500 Sobic008G101350 Sobic008G101350 Sobic010G218500--Sobic008G101350 Sobic004G096200 Sobic004G096200 Sobic010G218500--Sobic004G096200 Sobic007G211000 Sobic007G211000 Sobic010G218500--Sobic007G211000 Sobic010G218500--Sobic002G108800 Sobic010G218500--Sobic001G345333 Sobic008G161401--Sobic010G248200 Sobic008G161401--Sobic004G212800 Sobic008G161401--Sobic007G073400 Sobic008G161401--Sobic005G130200 Sobic003G057800 Sobic003G057800 Sobic008G161401--Sobic003G057800 Sobic003G357500 Sobic003G357500 Sobic008G161401--Sobic003G357500 Sobic009G156000 Sobic009G156000 Sobic008G161401--Sobic009G156000 Sobic008G161401--Sobic002G108800 Sobic001G479500 Sobic001G479500 Sobic008G161401--Sobic001G479500
Octagon: transcription factors


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