Gene annotation
Transcriptome id Sobic.003G204000.1
Synonym
Functional annotation expressed protein
UniProt C5XPJ5
Pfam -
Panther DB PTHR35730 PTHR35730:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G08880 : -
RAP-DB (Rice) LOC_Os04g36780.1 : expressed protein
MaizeGDB (Corn) Zm00025a056139
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
2 Sobic.008G068800 cytokinin inducible protein, putative, expressed -
3 Sobic.004G212800 - -
4 Sobic.008G116500 plus-3 domain containing protein, expressed K15178: RNA polymerase-associated protein RTF1
5 Sobic.004G169501 - -
6 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
7 Sobic.004G112500 - -
8 Sobic.002G297800 growth regulating factor protein, putative, expressed -
9 Sobic.003G315332 - K15421: secretion-regulating guanine nucleotide exchange factor
10 Sobic.009G059600 KIP1, putative, expressed -
11 Sobic.002G221900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
12 Sobic.002G253500 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
13 Sobic.007G008800 VHS and GAT domain containing protein, expressed -
14 Sobic.007G142050 - -
15 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
16 Sobic.004G164600 - -
17 Sobic.002G001600 MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
18 Sobic.002G313300 bromodomain domain containing protein, expressed -
19 Sobic.008G167300 NBS-LRR disease resistance protein, putative, expressed -
20 Sobic.004G143700 protein phosphatase 2C, putative, expressed -


Gene co-expression network
sample Sobic003G204000 Sobic003G204000 Sobic001G024200 Sobic001G024200 Sobic003G204000--Sobic001G024200 Sobic008G068800 Sobic008G068800 Sobic003G204000--Sobic008G068800 Sobic004G212800 Sobic004G212800 Sobic003G204000--Sobic004G212800 Sobic008G116500 Sobic008G116500 Sobic003G204000--Sobic008G116500 Sobic004G169501 Sobic004G169501 Sobic003G204000--Sobic004G169501 Sobic001G543900 Sobic001G543900 Sobic003G204000--Sobic001G543900 Sobic004G112500 Sobic004G112500 Sobic003G204000--Sobic004G112500 Sobic002G297800 Sobic002G297800 Sobic003G204000--Sobic002G297800 Sobic003G315332 Sobic003G315332 Sobic003G204000--Sobic003G315332 Sobic001G024200--Sobic004G212800 Sobic007G211000 Sobic007G211000 Sobic001G024200--Sobic007G211000 Sobic001G024200--Sobic004G112500 Sobic001G024200--Sobic003G204000 Sobic001G272000 Sobic001G272000 Sobic001G024200--Sobic001G272000 Sobic004G164600 Sobic004G164600 Sobic001G024200--Sobic004G164600 SobicK009900 SobicK009900 Sobic001G024200--SobicK009900 Sobic001G439500 Sobic001G439500 Sobic001G024200--Sobic001G439500 Sobic010G248200 Sobic010G248200 Sobic001G024200--Sobic010G248200 Sobic007G116400 Sobic007G116400 Sobic008G068800--Sobic007G116400 Sobic007G142050 Sobic007G142050 Sobic008G068800--Sobic007G142050 Sobic008G068800--Sobic003G204000 Sobic008G068800--Sobic004G169501 Sobic009G059600 Sobic009G059600 Sobic008G068800--Sobic009G059600 Sobic008G068800--Sobic003G315332 Sobic004G286900 Sobic004G286900 Sobic008G068800--Sobic004G286900 Sobic003G424100 Sobic003G424100 Sobic008G068800--Sobic003G424100 Sobic008G068800--Sobic001G024200 Sobic007G073400 Sobic007G073400 Sobic004G212800--Sobic007G073400 Sobic004G212800--Sobic004G164600 Sobic004G212800--Sobic001G024200 Sobic001G345333 Sobic001G345333 Sobic004G212800--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic004G212800--Sobic002G007250 Sobic004G212800--Sobic010G248200 Sobic004G076732 Sobic004G076732 Sobic004G212800--Sobic004G076732 Sobic008G161401 Sobic008G161401 Sobic004G212800--Sobic008G161401 Sobic004G212800--Sobic004G112500 Sobic002G001600 Sobic002G001600 Sobic008G116500--Sobic002G001600 Sobic008G116500--Sobic001G543900 Sobic007G011400 Sobic007G011400 Sobic008G116500--Sobic007G011400 Sobic008G116500--Sobic001G439500 Sobic006G080300 Sobic006G080300 Sobic008G116500--Sobic006G080300 Sobic007G037100 Sobic007G037100 Sobic008G116500--Sobic007G037100 Sobic002G313300 Sobic002G313300 Sobic008G116500--Sobic002G313300 Sobic001G477800 Sobic001G477800 Sobic008G116500--Sobic001G477800 Sobic004G196700 Sobic004G196700 Sobic008G116500--Sobic004G196700 Sobic004G169501--Sobic003G315332 Sobic004G169501--Sobic007G142050 Sobic004G169501--Sobic008G068800 Sobic004G169501--Sobic007G116400 Sobic008G117200 Sobic008G117200 Sobic004G169501--Sobic008G117200 Sobic004G169501--Sobic003G204000 Sobic001G267233 Sobic001G267233 Sobic004G169501--Sobic001G267233 Sobic002G181450 Sobic002G181450 Sobic004G169501--Sobic002G181450 Sobic007G089600 Sobic007G089600 Sobic004G169501--Sobic007G089600 Sobic001G543900--Sobic001G477800 Sobic001G543900--Sobic002G313300 Sobic001G543900--Sobic004G112500 Sobic001G543900--Sobic002G001600 Sobic006G009400 Sobic006G009400 Sobic001G543900--Sobic006G009400 Sobic002G166700 Sobic002G166700 Sobic001G543900--Sobic002G166700 Sobic005G130200 Sobic005G130200 Sobic001G543900--Sobic005G130200 Sobic001G543900--Sobic001G272000 Sobic001G543900--Sobic010G248200 Sobic004G112500--Sobic001G024200 Sobic004G112500--Sobic004G212800 Sobic004G112500--Sobic007G211000 Sobic004G112500--Sobic001G543900 Sobic004G112500--Sobic004G164600 Sobic004G112500--Sobic010G248200 Sobic010G124001 Sobic010G124001 Sobic004G112500--Sobic010G124001 Sobic008G157950 Sobic008G157950 Sobic004G112500--Sobic008G157950 Sobic008G042250 Sobic008G042250 Sobic004G112500--Sobic008G042250 Sobic002G049000 Sobic002G049000 Sobic002G297800--Sobic002G049000 Sobic002G297800--Sobic003G204000 Sobic002G061400 Sobic002G061400 Sobic002G297800--Sobic002G061400 Sobic002G297800--Sobic008G068800 Sobic009G231300 Sobic009G231300 Sobic002G297800--Sobic009G231300 Sobic009G257300 Sobic009G257300 Sobic002G297800--Sobic009G257300 Sobic002G297800--Sobic004G212800 Sobic002G297800--Sobic002G313300 Sobic002G297800--Sobic009G059600 Sobic003G315332--Sobic004G169501 Sobic003G315332--Sobic007G142050 Sobic002G076400 Sobic002G076400 Sobic003G315332--Sobic002G076400 Sobic003G315332--Sobic008G068800 Sobic006G129700 Sobic006G129700 Sobic003G315332--Sobic006G129700 Sobic003G315332--Sobic001G543900 Sobic010G263800 Sobic010G263800 Sobic003G315332--Sobic010G263800 Sobic003G315332--Sobic003G204000 Sobic003G315332--Sobic007G089600
Octagon: transcription factors


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