Gene annotation
Transcriptome id Sobic.002G001600.1
Synonym ATBPM3, BPM3, Sb02g000320
Functional annotation MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt C5X6J5
Pfam PF00651
Panther DB PTHR24411 PTHR24411:SF36
NCBI CDD KOG1987; Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G39760 : BTB/POZ/MATH-domains containing protein
RAP-DB (Rice) LOC_Os07g01140.1 : MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) Zm00025a016268
Brachypodium PNT77233 , KQK21260
Barley HORVU2Hr1G064920.1 , HORVU2Hr1G064920.2
Wheat TraesCS2D02G266900
Populus -


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cDNA sequences
Sobic.002G001600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G116500 plus-3 domain containing protein, expressed K15178: RNA polymerase-associated protein RTF1
2 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
3 Sobic.002G313300 bromodomain domain containing protein, expressed -
4 Sobic.008G101800 expressed protein -
5 Sobic.007G185900 IBR domain containing protein, putative, expressed K11968: ariadne-1
6 Sobic.002G166700 cyclin, putative, expressed -
7 Sobic.008G106000 eukaryotic translation initiation factor 5B, putative, expressed K03243: translation initiation factor 5B
8 Sobic.007G037100 MYB family transcription factor, putative, expressed -
9 Sobic.002G166600 cyclin, putative, expressed -
10 Sobic.001G257300 OsFBL52 - F-box domain and LRR containing protein, expressed -
11 Sobic.006G080300 SET domain containing protein, expressed -
12 Sobic.001G477800 expressed protein -
13 Sobic.006G123900 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
14 Sobic.001G206100 expressed protein -
15 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
16 Sobic.004G196700 expressed protein -
17 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
18 Sobic.004G349900 -(PubMedID : 27329702)@expressed protein -
19 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
20 Sobic.007G137900 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase


Gene co-expression network
sample Sobic002G001600 Sobic002G001600 Sobic008G116500 Sobic008G116500 Sobic002G001600--Sobic008G116500 Sobic001G543900 Sobic001G543900 Sobic002G001600--Sobic001G543900 Sobic002G313300 Sobic002G313300 Sobic002G001600--Sobic002G313300 Sobic008G101800 Sobic008G101800 Sobic002G001600--Sobic008G101800 Sobic007G185900 Sobic007G185900 Sobic002G001600--Sobic007G185900 Sobic002G166700 Sobic002G166700 Sobic002G001600--Sobic002G166700 Sobic008G106000 Sobic008G106000 Sobic002G001600--Sobic008G106000 Sobic007G037100 Sobic007G037100 Sobic002G001600--Sobic007G037100 Sobic002G166600 Sobic002G166600 Sobic002G001600--Sobic002G166600 Sobic008G116500--Sobic002G001600 Sobic008G116500--Sobic001G543900 Sobic007G011400 Sobic007G011400 Sobic008G116500--Sobic007G011400 Sobic001G439500 Sobic001G439500 Sobic008G116500--Sobic001G439500 Sobic006G080300 Sobic006G080300 Sobic008G116500--Sobic006G080300 Sobic008G116500--Sobic007G037100 Sobic008G116500--Sobic002G313300 Sobic001G477800 Sobic001G477800 Sobic008G116500--Sobic001G477800 Sobic004G196700 Sobic004G196700 Sobic008G116500--Sobic004G196700 Sobic001G543900--Sobic001G477800 Sobic001G543900--Sobic002G313300 Sobic004G112500 Sobic004G112500 Sobic001G543900--Sobic004G112500 Sobic001G543900--Sobic002G001600 Sobic006G009400 Sobic006G009400 Sobic001G543900--Sobic006G009400 Sobic001G543900--Sobic002G166700 Sobic005G130200 Sobic005G130200 Sobic001G543900--Sobic005G130200 Sobic001G272000 Sobic001G272000 Sobic001G543900--Sobic001G272000 Sobic010G248200 Sobic010G248200 Sobic001G543900--Sobic010G248200 Sobic002G313300--Sobic001G477800 Sobic002G077200 Sobic002G077200 Sobic002G313300--Sobic002G077200 Sobic002G313300--Sobic007G011400 Sobic010G263800 Sobic010G263800 Sobic002G313300--Sobic010G263800 Sobic002G313300--Sobic001G543900 Sobic002G313300--Sobic006G080300 Sobic002G313300--Sobic006G009400 Sobic002G313300--Sobic007G185900 Sobic004G031700 Sobic004G031700 Sobic002G313300--Sobic004G031700 Sobic008G101800--Sobic002G001600 Sobic008G073000 Sobic008G073000 Sobic008G101800--Sobic008G073000 Sobic001G222300 Sobic001G222300 Sobic008G101800--Sobic001G222300 Sobic001G206100 Sobic001G206100 Sobic008G101800--Sobic001G206100 Sobic005G162600 Sobic005G162600 Sobic008G101800--Sobic005G162600 Sobic008G101800--Sobic008G116500 Sobic004G332300 Sobic004G332300 Sobic008G101800--Sobic004G332300 Sobic008G101800--Sobic007G185900 Sobic002G045400 Sobic002G045400 Sobic008G101800--Sobic002G045400 Sobic007G185900--Sobic004G196700 Sobic002G157300 Sobic002G157300 Sobic007G185900--Sobic002G157300 Sobic007G078000 Sobic007G078000 Sobic007G185900--Sobic007G078000 Sobic010G260500 Sobic010G260500 Sobic007G185900--Sobic010G260500 Sobic007G185900--Sobic002G313300 Sobic008G054500 Sobic008G054500 Sobic007G185900--Sobic008G054500 Sobic003G397800 Sobic003G397800 Sobic007G185900--Sobic003G397800 Sobic005G149500 Sobic005G149500 Sobic007G185900--Sobic005G149500 Sobic003G187400 Sobic003G187400 Sobic007G185900--Sobic003G187400 Sobic002G166700--Sobic002G166600 Sobic002G166700--Sobic001G543900 Sobic002G166700--Sobic002G001600 Sobic002G166700--Sobic001G272000 Sobic007G211000 Sobic007G211000 Sobic002G166700--Sobic007G211000 Sobic002G166700--Sobic008G116500 Sobic010G124001 Sobic010G124001 Sobic002G166700--Sobic010G124001 Sobic001G271900 Sobic001G271900 Sobic002G166700--Sobic001G271900 Sobic002G166700--Sobic007G037100 Sobic008G106000--Sobic001G543900 Sobic008G106000--Sobic002G001600 Sobic006G123900 Sobic006G123900 Sobic008G106000--Sobic006G123900 Sobic008G106000--Sobic002G313300 Sobic008G106000--Sobic007G185900 Sobic002G330400 Sobic002G330400 Sobic008G106000--Sobic002G330400 Sobic008G106000--Sobic006G009400 Sobic008G106000--Sobic008G116500 Sobic008G106000--Sobic002G077200 Sobic006G082600 Sobic006G082600 Sobic007G037100--Sobic006G082600 Sobic007G037100--Sobic001G222300 Sobic007G037100--Sobic008G116500 Sobic007G037100--Sobic002G001600 Sobic007G037100--Sobic010G124001 Sobic007G037100--Sobic007G211000 Sobic007G037100--Sobic007G078000 Sobic001G162300 Sobic001G162300 Sobic007G037100--Sobic001G162300 Sobic002G283300 Sobic002G283300 Sobic007G037100--Sobic002G283300 Sobic002G166600--Sobic002G166700 Sobic002G166600--Sobic001G543900 Sobic002G166600--Sobic002G001600 Sobic009G104300 Sobic009G104300 Sobic002G166600--Sobic009G104300 Sobic002G166600--Sobic008G116500 Sobic002G166600--Sobic001G272000 Sobic001G271801 Sobic001G271801 Sobic002G166600--Sobic001G271801 Sobic005G110427 Sobic005G110427 Sobic002G166600--Sobic005G110427 Sobic007G137900 Sobic007G137900 Sobic002G166600--Sobic007G137900
Octagon: transcription factors


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