Gene annotation
Transcriptome id Sobic.008G106000.1
Synonym Sb08g016090
Functional annotation eukaryotic translation initiation factor 5B, putative, expressed
UniProt A0A1Z5R631
Pfam PF01926 PF11987
Panther DB PTHR23115 PTHR23115:SF142
NCBI CDD -
KEGG Orthology K03243; translation initiation factor 5B
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT1G76810 : eukaryotic translation initiation factor 2 (eIF-2) family protein
RAP-DB (Rice) LOC_Os12g31880.1 : translation initiation factor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ86626
Barley -
Wheat TraesCS7A02G479800 , TraesCS7A02G479800 , TraesCS7B02G382100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
2 Sobic.002G001600 MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
3 Sobic.006G123900 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
4 Sobic.002G313300 bromodomain domain containing protein, expressed -
5 Sobic.007G185900 IBR domain containing protein, putative, expressed K11968: ariadne-1
6 Sobic.002G330400 pentatricopeptide, putative, expressed -
7 Sobic.006G009400 G-patch domain containing protein, expressed -
8 Sobic.008G116500 plus-3 domain containing protein, expressed K15178: RNA polymerase-associated protein RTF1
9 Sobic.002G077200 expressed protein -
10 Sobic.004G112500 - -
11 Sobic.001G477800 expressed protein -
12 Sobic.002G166600 cyclin, putative, expressed -
13 Sobic.002G166700 cyclin, putative, expressed -
14 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
15 Sobic.010G224300 peptidyl-prolyl cis-trans isomerase-like 4, putative, expressed K12735: peptidyl-prolyl cis-trans isomerase-like 4
16 Sobic.001G272000 - -
17 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
18 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
19 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
20 Sobic.006G080300 SET domain containing protein, expressed -


Gene co-expression network
sample Sobic008G106000 Sobic008G106000 Sobic001G543900 Sobic001G543900 Sobic008G106000--Sobic001G543900 Sobic002G001600 Sobic002G001600 Sobic008G106000--Sobic002G001600 Sobic006G123900 Sobic006G123900 Sobic008G106000--Sobic006G123900 Sobic002G313300 Sobic002G313300 Sobic008G106000--Sobic002G313300 Sobic007G185900 Sobic007G185900 Sobic008G106000--Sobic007G185900 Sobic002G330400 Sobic002G330400 Sobic008G106000--Sobic002G330400 Sobic006G009400 Sobic006G009400 Sobic008G106000--Sobic006G009400 Sobic008G116500 Sobic008G116500 Sobic008G106000--Sobic008G116500 Sobic002G077200 Sobic002G077200 Sobic008G106000--Sobic002G077200 Sobic001G477800 Sobic001G477800 Sobic001G543900--Sobic001G477800 Sobic001G543900--Sobic002G313300 Sobic004G112500 Sobic004G112500 Sobic001G543900--Sobic004G112500 Sobic001G543900--Sobic002G001600 Sobic001G543900--Sobic006G009400 Sobic002G166700 Sobic002G166700 Sobic001G543900--Sobic002G166700 Sobic005G130200 Sobic005G130200 Sobic001G543900--Sobic005G130200 Sobic001G272000 Sobic001G272000 Sobic001G543900--Sobic001G272000 Sobic010G248200 Sobic010G248200 Sobic001G543900--Sobic010G248200 Sobic002G001600--Sobic008G116500 Sobic002G001600--Sobic001G543900 Sobic002G001600--Sobic002G313300 Sobic008G101800 Sobic008G101800 Sobic002G001600--Sobic008G101800 Sobic002G001600--Sobic007G185900 Sobic002G001600--Sobic002G166700 Sobic002G001600--Sobic008G106000 Sobic007G037100 Sobic007G037100 Sobic002G001600--Sobic007G037100 Sobic002G166600 Sobic002G166600 Sobic002G001600--Sobic002G166600 Sobic006G123900--Sobic008G106000 Sobic006G123900--Sobic002G001600 Sobic005G059100 Sobic005G059100 Sobic006G123900--Sobic005G059100 Sobic006G123900--Sobic002G313300 Sobic006G013500 Sobic006G013500 Sobic006G123900--Sobic006G013500 Sobic008G129700 Sobic008G129700 Sobic006G123900--Sobic008G129700 Sobic006G080300 Sobic006G080300 Sobic006G123900--Sobic006G080300 Sobic006G123900--Sobic007G185900 Sobic002G151600 Sobic002G151600 Sobic006G123900--Sobic002G151600 Sobic002G313300--Sobic001G477800 Sobic002G313300--Sobic002G077200 Sobic007G011400 Sobic007G011400 Sobic002G313300--Sobic007G011400 Sobic010G263800 Sobic010G263800 Sobic002G313300--Sobic010G263800 Sobic002G313300--Sobic001G543900 Sobic002G313300--Sobic006G080300 Sobic002G313300--Sobic006G009400 Sobic002G313300--Sobic007G185900 Sobic004G031700 Sobic004G031700 Sobic002G313300--Sobic004G031700 Sobic004G196700 Sobic004G196700 Sobic007G185900--Sobic004G196700 Sobic002G157300 Sobic002G157300 Sobic007G185900--Sobic002G157300 Sobic007G078000 Sobic007G078000 Sobic007G185900--Sobic007G078000 Sobic010G260500 Sobic010G260500 Sobic007G185900--Sobic010G260500 Sobic007G185900--Sobic002G313300 Sobic008G054500 Sobic008G054500 Sobic007G185900--Sobic008G054500 Sobic003G397800 Sobic003G397800 Sobic007G185900--Sobic003G397800 Sobic005G149500 Sobic005G149500 Sobic007G185900--Sobic005G149500 Sobic003G187400 Sobic003G187400 Sobic007G185900--Sobic003G187400 Sobic006G263700 Sobic006G263700 Sobic002G330400--Sobic006G263700 Sobic004G016500 Sobic004G016500 Sobic002G330400--Sobic004G016500 Sobic006G191400 Sobic006G191400 Sobic002G330400--Sobic006G191400 Sobic001G046600 Sobic001G046600 Sobic002G330400--Sobic001G046600 Sobic002G330400--Sobic001G543900 Sobic009G251300 Sobic009G251300 Sobic002G330400--Sobic009G251300 Sobic005G187200 Sobic005G187200 Sobic002G330400--Sobic005G187200 Sobic001G479500 Sobic001G479500 Sobic002G330400--Sobic001G479500 Sobic002G330400--Sobic006G009400 Sobic006G009400--Sobic010G263800 Sobic005G055150 Sobic005G055150 Sobic006G009400--Sobic005G055150 Sobic006G009400--Sobic002G313300 Sobic006G009400--Sobic001G543900 Sobic005G110427 Sobic005G110427 Sobic006G009400--Sobic005G110427 Sobic006G009400--Sobic001G477800 Sobic007G073400 Sobic007G073400 Sobic006G009400--Sobic007G073400 Sobic007G178700 Sobic007G178700 Sobic006G009400--Sobic007G178700 Sobic006G262200 Sobic006G262200 Sobic006G009400--Sobic006G262200 Sobic008G116500--Sobic002G001600 Sobic008G116500--Sobic001G543900 Sobic008G116500--Sobic007G011400 Sobic001G439500 Sobic001G439500 Sobic008G116500--Sobic001G439500 Sobic008G116500--Sobic006G080300 Sobic008G116500--Sobic007G037100 Sobic008G116500--Sobic002G313300 Sobic008G116500--Sobic001G477800 Sobic008G116500--Sobic004G196700 Sobic002G077200--Sobic002G313300 Sobic002G077200--Sobic010G263800 Sobic003G258400 Sobic003G258400 Sobic002G077200--Sobic003G258400 Sobic007G205800 Sobic007G205800 Sobic002G077200--Sobic007G205800 Sobic002G077200--Sobic006G009400 Sobic009G231300 Sobic009G231300 Sobic002G077200--Sobic009G231300 Sobic002G077200--Sobic001G477800 Sobic002G077200--Sobic005G187200 Sobic002G077200--Sobic001G543900
Octagon: transcription factors


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