Gene annotation
Transcriptome id Sobic.010G224300.1
Synonym Sb10g026940, CYP59, ATCYP59
Functional annotation peptidyl-prolyl cis-trans isomerase-like 4, putative, expressed
UniProt C5Z7R2
Pfam PF00098 PF00076 PF00160
Panther DB PTHR11071 PTHR11071:SF156
NCBI CDD KOG0415; Predicted peptidyl prolyl cis-trans isomerase
KEGG Orthology K12735; peptidyl-prolyl cis-trans isomerase-like 4
Gene Ontology GO:0008270; zinc ion binding GO:0003676nucleic acid binding GO:0006457protein folding GO:0003755peptidyl-prolyl cis-trans isomerase activity GO:0000413protein peptidyl-prolyl isomerization


Orthologs (automatic annotation)
TAIR AT1G53720 : cyclophilin 59
RAP-DB (Rice) LOC_Os06g45910.1 : peptidyl-prolyl cis-trans isomerase-like 4, putative, expressed
MaizeGDB (Corn) Zm00025a041931
Brachypodium PNT72194 , KQK03569 , KQK15116 , PNT77986
Barley HORVU1Hr1G040970.1 , HORVU7Hr1G107520.10 , HORVU1Hr1G015670.4 , HORVU1Hr1G015670.5 , HORVU1Hr1G015670.2 , HORVU1Hr1G015670.3 , HORVU1Hr1G015670.1 , HORVU7Hr1G107520.5 , HORVU7Hr1G107520.6 , HORVU7Hr1G107520.7 , HORVU7Hr1G107520.2 , HORVU7Hr1G107520.8 , HORVU7Hr1G107520.9 , HORVU6Hr1G042040.1
Wheat TraesCS7D02G457200 , TraesCS7B02G371900 , TraesCS7A02G469800
Populus -


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cDNA sequences
Sobic.010G224300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G102000 expressed protein K13172: SRRM2, serine/arginine repetitive matrix protein 2
2 Sobic.008G106000 eukaryotic translation initiation factor 5B, putative, expressed K03243: translation initiation factor 5B
3 Sobic.001G544200 endonuclease, putative, expressed K10848: ERCC4, DNA excision repair protein ERCC-4
4 Sobic.006G123900 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
5 Sobic.008G078100 EDM2, putative, expressed -
6 Sobic.001G511500 RNA recognition motif containing protein, putative, expressed K12837: splicing factor U2AF 65 kDa subunit
7 Sobic.006G251900 - -
8 Sobic.002G077200 expressed protein -
9 Sobic.004G094500 histone deacetylase, putative, expressed K11418: histone deacetylase 11
10 Sobic.009G083400 RNA recognition motif family protein, expressed -
11 Sobic.007G043500 DNA topoisomerase 1, putative, expressed K03163: DNA topoisomerase I
12 Sobic.004G216500 hypothetical protein -
13 Sobic.001G464200 flap endonuclease, putative, expressed K10846: ERCC5, XPG, DNA excision repair protein ERCC-5
14 Sobic.002G151600 R-interacting factor 1, putative, expressed -
15 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
16 Sobic.002G313300 bromodomain domain containing protein, expressed -
17 Sobic.005G059100 bromodomain domain containing protein, expressed -
18 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
19 Sobic.006G009400 G-patch domain containing protein, expressed -
20 Sobic.003G038500 SSRP1-like FACT complex subunit, putative, expressed K09272: structure-specific recognition protein 1


Gene co-expression network
sample Sobic010G224300 Sobic010G224300 Sobic004G102000 Sobic004G102000 Sobic010G224300--Sobic004G102000 Sobic008G106000 Sobic008G106000 Sobic010G224300--Sobic008G106000 Sobic001G544200 Sobic001G544200 Sobic010G224300--Sobic001G544200 Sobic006G123900 Sobic006G123900 Sobic010G224300--Sobic006G123900 Sobic008G078100 Sobic008G078100 Sobic010G224300--Sobic008G078100 Sobic001G511500 Sobic001G511500 Sobic010G224300--Sobic001G511500 Sobic006G251900 Sobic006G251900 Sobic010G224300--Sobic006G251900 Sobic002G077200 Sobic002G077200 Sobic010G224300--Sobic002G077200 Sobic004G094500 Sobic004G094500 Sobic010G224300--Sobic004G094500 Sobic004G102000--Sobic010G224300 Sobic009G083400 Sobic009G083400 Sobic004G102000--Sobic009G083400 Sobic004G102000--Sobic008G106000 Sobic004G102000--Sobic006G251900 Sobic001G473000 Sobic001G473000 Sobic004G102000--Sobic001G473000 Sobic001G174900 Sobic001G174900 Sobic004G102000--Sobic001G174900 Sobic004G102000--Sobic004G094500 Sobic007G043500 Sobic007G043500 Sobic004G102000--Sobic007G043500 Sobic007G143300 Sobic007G143300 Sobic004G102000--Sobic007G143300 Sobic001G543900 Sobic001G543900 Sobic008G106000--Sobic001G543900 Sobic002G001600 Sobic002G001600 Sobic008G106000--Sobic002G001600 Sobic008G106000--Sobic006G123900 Sobic002G313300 Sobic002G313300 Sobic008G106000--Sobic002G313300 Sobic007G185900 Sobic007G185900 Sobic008G106000--Sobic007G185900 Sobic002G330400 Sobic002G330400 Sobic008G106000--Sobic002G330400 Sobic006G009400 Sobic006G009400 Sobic008G106000--Sobic006G009400 Sobic008G116500 Sobic008G116500 Sobic008G106000--Sobic008G116500 Sobic008G106000--Sobic002G077200 Sobic004G031700 Sobic004G031700 Sobic001G544200--Sobic004G031700 Sobic001G477800 Sobic001G477800 Sobic001G544200--Sobic001G477800 Sobic001G464200 Sobic001G464200 Sobic001G544200--Sobic001G464200 Sobic009G040700 Sobic009G040700 Sobic001G544200--Sobic009G040700 Sobic001G544200--Sobic001G511500 Sobic006G128900 Sobic006G128900 Sobic001G544200--Sobic006G128900 Sobic001G544200--Sobic008G078100 Sobic008G054500 Sobic008G054500 Sobic001G544200--Sobic008G054500 Sobic001G094000 Sobic001G094000 Sobic001G544200--Sobic001G094000 Sobic006G123900--Sobic008G106000 Sobic006G123900--Sobic002G001600 Sobic005G059100 Sobic005G059100 Sobic006G123900--Sobic005G059100 Sobic006G123900--Sobic002G313300 Sobic006G013500 Sobic006G013500 Sobic006G123900--Sobic006G013500 Sobic008G129700 Sobic008G129700 Sobic006G123900--Sobic008G129700 Sobic006G080300 Sobic006G080300 Sobic006G123900--Sobic006G080300 Sobic006G123900--Sobic007G185900 Sobic002G151600 Sobic002G151600 Sobic006G123900--Sobic002G151600 Sobic008G078100--Sobic001G094000 Sobic008G078100--Sobic008G054500 Sobic008G078100--Sobic009G040700 Sobic008G078100--Sobic001G477800 Sobic003G187400 Sobic003G187400 Sobic008G078100--Sobic003G187400 Sobic008G078100--Sobic001G544200 Sobic008G078100--Sobic007G185900 Sobic003G422300 Sobic003G422300 Sobic008G078100--Sobic003G422300 Sobic004G196700 Sobic004G196700 Sobic008G078100--Sobic004G196700 Sobic007G000100 Sobic007G000100 Sobic001G511500--Sobic007G000100 Sobic006G209850 Sobic006G209850 Sobic001G511500--Sobic006G209850 Sobic001G511500--Sobic006G128900 Sobic003G119000 Sobic003G119000 Sobic001G511500--Sobic003G119000 Sobic001G511500--Sobic004G031700 Sobic001G306900 Sobic001G306900 Sobic001G511500--Sobic001G306900 Sobic003G445400 Sobic003G445400 Sobic001G511500--Sobic003G445400 Sobic003G307000 Sobic003G307000 Sobic001G511500--Sobic003G307000 Sobic006G032400 Sobic006G032400 Sobic001G511500--Sobic006G032400 Sobic001G347300 Sobic001G347300 Sobic006G251900--Sobic001G347300 Sobic007G126600 Sobic007G126600 Sobic006G251900--Sobic007G126600 Sobic006G251900--Sobic009G083400 Sobic003G108700 Sobic003G108700 Sobic006G251900--Sobic003G108700 Sobic006G251900--Sobic001G511500 Sobic004G216500 Sobic004G216500 Sobic006G251900--Sobic004G216500 Sobic002G127100 Sobic002G127100 Sobic006G251900--Sobic002G127100 Sobic008G192600 Sobic008G192600 Sobic006G251900--Sobic008G192600 Sobic003G038500 Sobic003G038500 Sobic006G251900--Sobic003G038500 Sobic002G077200--Sobic002G313300 Sobic010G263800 Sobic010G263800 Sobic002G077200--Sobic010G263800 Sobic003G258400 Sobic003G258400 Sobic002G077200--Sobic003G258400 Sobic007G205800 Sobic007G205800 Sobic002G077200--Sobic007G205800 Sobic002G077200--Sobic006G009400 Sobic009G231300 Sobic009G231300 Sobic002G077200--Sobic009G231300 Sobic002G077200--Sobic001G477800 Sobic005G187200 Sobic005G187200 Sobic002G077200--Sobic005G187200 Sobic002G077200--Sobic001G543900 Sobic001G394400 Sobic001G394400 Sobic004G094500--Sobic001G394400 Sobic004G094500--Sobic001G477800 Sobic007G037900 Sobic007G037900 Sobic004G094500--Sobic007G037900 Sobic002G072000 Sobic002G072000 Sobic004G094500--Sobic002G072000 Sobic006G246900 Sobic006G246900 Sobic004G094500--Sobic006G246900 Sobic004G094500--Sobic008G078100 Sobic006G048775 Sobic006G048775 Sobic004G094500--Sobic006G048775 Sobic004G094500--Sobic002G151600 Sobic005G110523 Sobic005G110523 Sobic004G094500--Sobic005G110523
Octagon: transcription factors


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