Gene annotation
Transcriptome id Sobic.002G077200.3,Sobic.002G077200.4
Synonym Sb02g006450
Functional annotation expressed protein
UniProt C5XDC0
Pfam -
Panther DB PTHR34684 PTHR34684:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33690 : -
RAP-DB (Rice) LOC_Os07g11290.1 : expressed protein
MaizeGDB (Corn) Zm00025a045406 , Zm00025a048464
Brachypodium KQJ85162
Barley HORVU7Hr1G023780.5 , HORVU7Hr1G023780.3
Wheat TraesCS7A02G111400 , TraesCS7D02G106500 , TraesCS7B02G009300 , TraesCS5A02G215300 , TraesCS5A02G215300 , TraesCS5A02G215300 , TraesCS5D02G216700 , TraesCS5D02G216700
Populus -


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cDNA sequences
Sobic.002G077200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G313300 bromodomain domain containing protein, expressed -
2 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
3 Sobic.003G258400 splicing factor-related, putative, expressed -
4 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
5 Sobic.006G009400 G-patch domain containing protein, expressed -
6 Sobic.009G231300 drought induced 19 protein, putative, expressed -
7 Sobic.001G477800 expressed protein -
8 Sobic.005G187200 expressed protein -
9 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
10 Sobic.004G256600 KH domain containing protein, putative, expressed K14945: protein quaking
11 Sobic.001G347600 paramyosin, putative, expressed -
12 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
13 Sobic.007G023700 MA3 domain containing protein, expressed -
14 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
15 Sobic.004G271900 RMD5 homolog A, putative, expressed -
16 Sobic.002G151600 R-interacting factor 1, putative, expressed -
17 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
18 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
19 Sobic.009G087800 seven in absentia protein family domain containing protein, expressed K08742: E3 ubiquitin-protein ligase SIAH2
20 Sobic.003G435600 CBS domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G077200 Sobic002G077200 Sobic002G313300 Sobic002G313300 Sobic002G077200--Sobic002G313300 Sobic010G263800 Sobic010G263800 Sobic002G077200--Sobic010G263800 Sobic003G258400 Sobic003G258400 Sobic002G077200--Sobic003G258400 Sobic007G205800 Sobic007G205800 Sobic002G077200--Sobic007G205800 Sobic006G009400 Sobic006G009400 Sobic002G077200--Sobic006G009400 Sobic009G231300 Sobic009G231300 Sobic002G077200--Sobic009G231300 Sobic001G477800 Sobic001G477800 Sobic002G077200--Sobic001G477800 Sobic005G187200 Sobic005G187200 Sobic002G077200--Sobic005G187200 Sobic001G543900 Sobic001G543900 Sobic002G077200--Sobic001G543900 Sobic002G313300--Sobic001G477800 Sobic002G313300--Sobic002G077200 Sobic007G011400 Sobic007G011400 Sobic002G313300--Sobic007G011400 Sobic002G313300--Sobic010G263800 Sobic002G313300--Sobic001G543900 Sobic006G080300 Sobic006G080300 Sobic002G313300--Sobic006G080300 Sobic002G313300--Sobic006G009400 Sobic007G185900 Sobic007G185900 Sobic002G313300--Sobic007G185900 Sobic004G031700 Sobic004G031700 Sobic002G313300--Sobic004G031700 Sobic010G263800--Sobic006G009400 Sobic010G263800--Sobic007G011400 Sobic010G263800--Sobic002G077200 Sobic010G263800--Sobic002G313300 Sobic002G157300 Sobic002G157300 Sobic010G263800--Sobic002G157300 Sobic010G263800--Sobic007G205800 Sobic009G117400 Sobic009G117400 Sobic010G263800--Sobic009G117400 Sobic001G347600 Sobic001G347600 Sobic010G263800--Sobic001G347600 Sobic008G034600 Sobic008G034600 Sobic010G263800--Sobic008G034600 Sobic003G258400--Sobic002G077200 Sobic004G256600 Sobic004G256600 Sobic003G258400--Sobic004G256600 Sobic009G087800 Sobic009G087800 Sobic003G258400--Sobic009G087800 Sobic003G258400--Sobic009G231300 Sobic009G180200 Sobic009G180200 Sobic003G258400--Sobic009G180200 Sobic004G271900 Sobic004G271900 Sobic003G258400--Sobic004G271900 Sobic003G258400--Sobic007G205800 Sobic003G093600 Sobic003G093600 Sobic003G258400--Sobic003G093600 Sobic009G110366 Sobic009G110366 Sobic003G258400--Sobic009G110366 Sobic007G205800--Sobic007G011400 Sobic007G205800--Sobic009G087800 Sobic007G205800--Sobic010G263800 Sobic007G205800--Sobic008G034600 Sobic007G205800--Sobic004G271900 Sobic009G022200 Sobic009G022200 Sobic007G205800--Sobic009G022200 Sobic007G205800--Sobic003G093600 Sobic007G205800--Sobic003G258400 Sobic007G205800--Sobic002G077200 Sobic006G009400--Sobic010G263800 Sobic005G055150 Sobic005G055150 Sobic006G009400--Sobic005G055150 Sobic006G009400--Sobic002G313300 Sobic006G009400--Sobic001G543900 Sobic005G110427 Sobic005G110427 Sobic006G009400--Sobic005G110427 Sobic006G009400--Sobic001G477800 Sobic007G073400 Sobic007G073400 Sobic006G009400--Sobic007G073400 Sobic007G178700 Sobic007G178700 Sobic006G009400--Sobic007G178700 Sobic006G262200 Sobic006G262200 Sobic006G009400--Sobic006G262200 Sobic005G130100 Sobic005G130100 Sobic009G231300--Sobic005G130100 Sobic009G231300--Sobic009G180200 Sobic009G109450 Sobic009G109450 Sobic009G231300--Sobic009G109450 Sobic009G078500 Sobic009G078500 Sobic009G231300--Sobic009G078500 Sobic007G156500 Sobic007G156500 Sobic009G231300--Sobic007G156500 Sobic005G003200 Sobic005G003200 Sobic009G231300--Sobic005G003200 Sobic009G231300--Sobic003G258400 Sobic004G199600 Sobic004G199600 Sobic009G231300--Sobic004G199600 Sobic010G050600 Sobic010G050600 Sobic009G231300--Sobic010G050600 Sobic001G477800--Sobic002G313300 Sobic001G477800--Sobic004G031700 Sobic001G094000 Sobic001G094000 Sobic001G477800--Sobic001G094000 Sobic001G544200 Sobic001G544200 Sobic001G477800--Sobic001G544200 Sobic001G477800--Sobic001G543900 Sobic001G477800--Sobic006G080300 Sobic009G040700 Sobic009G040700 Sobic001G477800--Sobic009G040700 Sobic001G477800--Sobic007G011400 Sobic001G477800--Sobic006G009400 Sobic005G187200--Sobic010G263800 Sobic005G187200--Sobic004G271900 Sobic001G479500 Sobic001G479500 Sobic005G187200--Sobic001G479500 Sobic005G187200--Sobic004G256600 Sobic005G187200--Sobic007G205800 Sobic005G187200--Sobic007G011400 Sobic005G187200--Sobic002G077200 Sobic009G134500 Sobic009G134500 Sobic005G187200--Sobic009G134500 Sobic001G194900 Sobic001G194900 Sobic005G187200--Sobic001G194900 Sobic001G543900--Sobic001G477800 Sobic001G543900--Sobic002G313300 Sobic004G112500 Sobic004G112500 Sobic001G543900--Sobic004G112500 Sobic002G001600 Sobic002G001600 Sobic001G543900--Sobic002G001600 Sobic001G543900--Sobic006G009400 Sobic002G166700 Sobic002G166700 Sobic001G543900--Sobic002G166700 Sobic005G130200 Sobic005G130200 Sobic001G543900--Sobic005G130200 Sobic001G272000 Sobic001G272000 Sobic001G543900--Sobic001G272000 Sobic010G248200 Sobic010G248200 Sobic001G543900--Sobic010G248200
Octagon: transcription factors


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