Gene annotation
Transcriptome id Sobic.003G435600.1,Sobic.003G435600.3,Sobic.003G435600.2
Synonym Sb03g046640
Functional annotation CBS domain-containing protein, putative, expressed
UniProt A0A1W0W1G7 , C5XIM3 , A0A1W0W1F6
Pfam PF00564 PF00571 PF00571
Panther DB PTHR13780 PTHR13780:SF50
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G52950 : CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein
RAP-DB (Rice) LOC_Os01g73040.1 : CBS domain-containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ89233 , KQJ89231 , KQJ89232
Barley -
Wheat TraesCS3D02G513700 , TraesCS2A02G360600 , TraesCS3D02G438100 , TraesCS3B02G479900
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
2 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
3 Sobic.006G009400 G-patch domain containing protein, expressed -
4 Sobic.002G077200 expressed protein -
5 Sobic.002G313300 bromodomain domain containing protein, expressed -
6 Sobic.001G347600 paramyosin, putative, expressed -
7 Sobic.004G169501 - -
8 Sobic.004G005400 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K12854: SNRNP200, pre-mRNA-splicing helicase BRR2
9 Sobic.001G477800 expressed protein -
10 Sobic.008G117200 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
11 Sobic.006G039900 - -
12 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
13 Sobic.006G262200 - -
14 Sobic.002G051450 - -
15 Sobic.009G004700 stripe rust resistance protein Yr10, putative, expressed -
16 Sobic.005G110427 - -
17 Sobic.009G113600 - -
18 Sobic.009G257300 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
19 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
20 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -


Gene co-expression network
sample Sobic003G435600 Sobic003G435600 Sobic010G263800 Sobic010G263800 Sobic003G435600--Sobic010G263800 Sobic001G543900 Sobic001G543900 Sobic003G435600--Sobic001G543900 Sobic006G009400 Sobic006G009400 Sobic003G435600--Sobic006G009400 Sobic002G077200 Sobic002G077200 Sobic003G435600--Sobic002G077200 Sobic002G313300 Sobic002G313300 Sobic003G435600--Sobic002G313300 Sobic001G347600 Sobic001G347600 Sobic003G435600--Sobic001G347600 Sobic004G169501 Sobic004G169501 Sobic003G435600--Sobic004G169501 Sobic004G005400 Sobic004G005400 Sobic003G435600--Sobic004G005400 Sobic001G477800 Sobic001G477800 Sobic003G435600--Sobic001G477800 Sobic010G263800--Sobic006G009400 Sobic007G011400 Sobic007G011400 Sobic010G263800--Sobic007G011400 Sobic010G263800--Sobic002G077200 Sobic010G263800--Sobic002G313300 Sobic002G157300 Sobic002G157300 Sobic010G263800--Sobic002G157300 Sobic007G205800 Sobic007G205800 Sobic010G263800--Sobic007G205800 Sobic009G117400 Sobic009G117400 Sobic010G263800--Sobic009G117400 Sobic010G263800--Sobic001G347600 Sobic008G034600 Sobic008G034600 Sobic010G263800--Sobic008G034600 Sobic001G543900--Sobic001G477800 Sobic001G543900--Sobic002G313300 Sobic004G112500 Sobic004G112500 Sobic001G543900--Sobic004G112500 Sobic002G001600 Sobic002G001600 Sobic001G543900--Sobic002G001600 Sobic001G543900--Sobic006G009400 Sobic002G166700 Sobic002G166700 Sobic001G543900--Sobic002G166700 Sobic005G130200 Sobic005G130200 Sobic001G543900--Sobic005G130200 Sobic001G272000 Sobic001G272000 Sobic001G543900--Sobic001G272000 Sobic010G248200 Sobic010G248200 Sobic001G543900--Sobic010G248200 Sobic006G009400--Sobic010G263800 Sobic005G055150 Sobic005G055150 Sobic006G009400--Sobic005G055150 Sobic006G009400--Sobic002G313300 Sobic006G009400--Sobic001G543900 Sobic005G110427 Sobic005G110427 Sobic006G009400--Sobic005G110427 Sobic006G009400--Sobic001G477800 Sobic007G073400 Sobic007G073400 Sobic006G009400--Sobic007G073400 Sobic007G178700 Sobic007G178700 Sobic006G009400--Sobic007G178700 Sobic006G262200 Sobic006G262200 Sobic006G009400--Sobic006G262200 Sobic002G077200--Sobic002G313300 Sobic002G077200--Sobic010G263800 Sobic003G258400 Sobic003G258400 Sobic002G077200--Sobic003G258400 Sobic002G077200--Sobic007G205800 Sobic002G077200--Sobic006G009400 Sobic009G231300 Sobic009G231300 Sobic002G077200--Sobic009G231300 Sobic002G077200--Sobic001G477800 Sobic005G187200 Sobic005G187200 Sobic002G077200--Sobic005G187200 Sobic002G077200--Sobic001G543900 Sobic002G313300--Sobic001G477800 Sobic002G313300--Sobic002G077200 Sobic002G313300--Sobic007G011400 Sobic002G313300--Sobic010G263800 Sobic002G313300--Sobic001G543900 Sobic006G080300 Sobic006G080300 Sobic002G313300--Sobic006G080300 Sobic002G313300--Sobic006G009400 Sobic007G185900 Sobic007G185900 Sobic002G313300--Sobic007G185900 Sobic004G031700 Sobic004G031700 Sobic002G313300--Sobic004G031700 Sobic001G347600--Sobic010G263800 Sobic007G023700 Sobic007G023700 Sobic001G347600--Sobic007G023700 Sobic004G143700 Sobic004G143700 Sobic001G347600--Sobic004G143700 Sobic001G347600--Sobic002G077200 Sobic001G347600--Sobic009G117400 Sobic007G035600 Sobic007G035600 Sobic001G347600--Sobic007G035600 Sobic001G347600--Sobic007G073400 Sobic001G347600--Sobic007G205800 SobicK016900 SobicK016900 Sobic001G347600--SobicK016900 Sobic003G315332 Sobic003G315332 Sobic004G169501--Sobic003G315332 Sobic007G142050 Sobic007G142050 Sobic004G169501--Sobic007G142050 Sobic008G068800 Sobic008G068800 Sobic004G169501--Sobic008G068800 Sobic007G116400 Sobic007G116400 Sobic004G169501--Sobic007G116400 Sobic008G117200 Sobic008G117200 Sobic004G169501--Sobic008G117200 Sobic003G204000 Sobic003G204000 Sobic004G169501--Sobic003G204000 Sobic001G267233 Sobic001G267233 Sobic004G169501--Sobic001G267233 Sobic002G181450 Sobic002G181450 Sobic004G169501--Sobic002G181450 Sobic007G089600 Sobic007G089600 Sobic004G169501--Sobic007G089600 Sobic004G005400--Sobic005G110427 Sobic004G005400--Sobic006G262200 Sobic004G005400--Sobic006G009400 Sobic004G005400--Sobic010G263800 Sobic005G221425 Sobic005G221425 Sobic004G005400--Sobic005G221425 Sobic009G209800 Sobic009G209800 Sobic004G005400--Sobic009G209800 Sobic003G346000 Sobic003G346000 Sobic004G005400--Sobic003G346000 Sobic003G031750 Sobic003G031750 Sobic004G005400--Sobic003G031750 Sobic008G079100 Sobic008G079100 Sobic004G005400--Sobic008G079100 Sobic001G477800--Sobic002G313300 Sobic001G477800--Sobic004G031700 Sobic001G094000 Sobic001G094000 Sobic001G477800--Sobic001G094000 Sobic001G544200 Sobic001G544200 Sobic001G477800--Sobic001G544200 Sobic001G477800--Sobic001G543900 Sobic001G477800--Sobic006G080300 Sobic009G040700 Sobic009G040700 Sobic001G477800--Sobic009G040700 Sobic001G477800--Sobic007G011400 Sobic001G477800--Sobic006G009400
Octagon: transcription factors


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