Gene annotation
Transcriptome id Sobic.007G023700.1
Synonym Sb07g002090
Functional annotation MA3 domain containing protein, expressed
UniProt C5YMI0
Pfam PF02847
Panther DB PTHR12626 PTHR12626:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63190 : MA3 domain-containing protein
RAP-DB (Rice) LOC_Os08g02690.1 : MA3 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a040320 , Zm00025a042990
Brachypodium KQJ94909
Barley HORVU7Hr1G074850.5 , HORVU7Hr1G074850.4 , HORVU7Hr1G074850.1 , HORVU7Hr1G074850.3 , HORVU7Hr1G074850.2
Wheat TraesCS7B02G214700 , TraesCS7A02G313800 , TraesCS7D02G310600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G093600 methyltransferase, putative, expressed -
2 Sobic.002G039500 expressed protein -
3 Sobic.009G180200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
4 Sobic.004G143700 protein phosphatase 2C, putative, expressed -
5 Sobic.002G108800 auxin efflux carrier component, putative, expressed -
6 Sobic.002G221900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
7 Sobic.007G156500 alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
8 Sobic.001G347600 paramyosin, putative, expressed -
9 Sobic.006G184300 OsFBX148 - F-box domain containing protein, expressed -
10 Sobic.009G183500 expressed protein -
11 Sobic.002G253500 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
12 Sobic.010G248200 KID-containing protein, putative, expressed -
13 Sobic.003G258400 splicing factor-related, putative, expressed -
14 Sobic.004G221900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
15 Sobic.002G077200 expressed protein -
16 Sobic.009G231300 drought induced 19 protein, putative, expressed -
17 Sobic.009G156000 arginyl-tRNA--protein transferase 1, putative, expressed K00685: arginyl-tRNA---protein transferase
18 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
19 Sobic.007G150200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MTD1, putative, expressed -
20 Sobic.009G257300 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3


Gene co-expression network
sample Sobic007G023700 Sobic007G023700 Sobic003G093600 Sobic003G093600 Sobic007G023700--Sobic003G093600 Sobic002G039500 Sobic002G039500 Sobic007G023700--Sobic002G039500 Sobic009G180200 Sobic009G180200 Sobic007G023700--Sobic009G180200 Sobic004G143700 Sobic004G143700 Sobic007G023700--Sobic004G143700 Sobic002G108800 Sobic002G108800 Sobic007G023700--Sobic002G108800 Sobic002G221900 Sobic002G221900 Sobic007G023700--Sobic002G221900 Sobic007G156500 Sobic007G156500 Sobic007G023700--Sobic007G156500 Sobic001G347600 Sobic001G347600 Sobic007G023700--Sobic001G347600 Sobic006G184300 Sobic006G184300 Sobic007G023700--Sobic006G184300 Sobic003G093600--Sobic007G023700 Sobic009G022200 Sobic009G022200 Sobic003G093600--Sobic009G022200 Sobic004G271900 Sobic004G271900 Sobic003G093600--Sobic004G271900 Sobic007G205800 Sobic007G205800 Sobic003G093600--Sobic007G205800 Sobic003G093600--Sobic004G143700 Sobic009G156000 Sobic009G156000 Sobic003G093600--Sobic009G156000 Sobic009G087800 Sobic009G087800 Sobic003G093600--Sobic009G087800 Sobic003G258400 Sobic003G258400 Sobic003G093600--Sobic003G258400 Sobic001G424700 Sobic001G424700 Sobic003G093600--Sobic001G424700 Sobic002G253500 Sobic002G253500 Sobic002G039500--Sobic002G253500 Sobic002G039500--Sobic007G023700 Sobic002G039500--Sobic002G108800 Sobic002G039500--Sobic007G156500 Sobic002G039500--Sobic002G221900 Sobic004G212800 Sobic004G212800 Sobic002G039500--Sobic004G212800 Sobic009G231300 Sobic009G231300 Sobic002G039500--Sobic009G231300 Sobic003G044900 Sobic003G044900 Sobic002G039500--Sobic003G044900 Sobic007G073400 Sobic007G073400 Sobic002G039500--Sobic007G073400 Sobic004G199600 Sobic004G199600 Sobic009G180200--Sobic004G199600 Sobic001G363100 Sobic001G363100 Sobic009G180200--Sobic001G363100 Sobic009G109450 Sobic009G109450 Sobic009G180200--Sobic009G109450 Sobic009G078500 Sobic009G078500 Sobic009G180200--Sobic009G078500 Sobic009G180200--Sobic007G023700 Sobic009G180200--Sobic009G231300 Sobic005G130100 Sobic005G130100 Sobic009G180200--Sobic005G130100 Sobic009G180200--Sobic003G258400 Sobic005G121800 Sobic005G121800 Sobic009G180200--Sobic005G121800 Sobic004G143700--Sobic007G073400 Sobic004G143700--Sobic007G023700 Sobic004G143700--Sobic004G212800 Sobic002G283300 Sobic002G283300 Sobic004G143700--Sobic002G283300 Sobic010G248200 Sobic010G248200 Sobic004G143700--Sobic010G248200 Sobic001G024200 Sobic001G024200 Sobic004G143700--Sobic001G024200 Sobic004G143700--Sobic003G093600 Sobic001G439500 Sobic001G439500 Sobic004G143700--Sobic001G439500 Sobic001G543900 Sobic001G543900 Sobic004G143700--Sobic001G543900 Sobic002G108800--Sobic007G156500 Sobic002G007250 Sobic002G007250 Sobic002G108800--Sobic002G007250 Sobic001G345333 Sobic001G345333 Sobic002G108800--Sobic001G345333 Sobic002G108800--Sobic002G253500 Sobic002G108800--Sobic010G248200 Sobic002G108800--Sobic004G212800 Sobic002G108800--Sobic002G039500 Sobic002G108800--Sobic007G023700 Sobic002G108800--Sobic007G073400 Sobic002G221900--Sobic007G023700 Sobic002G221900--Sobic002G108800 Sobic002G221900--Sobic007G156500 Sobic002G221900--Sobic003G044900 Sobic002G221900--Sobic002G253500 Sobic002G221900--Sobic001G024200 Sobic002G221900--Sobic002G039500 Sobic002G221900--Sobic004G143700 Sobic003G204000 Sobic003G204000 Sobic002G221900--Sobic003G204000 Sobic007G156500--Sobic002G108800 Sobic007G156500--Sobic002G253500 Sobic007G156500--Sobic009G231300 Sobic007G156500--Sobic002G007250 Sobic007G156500--Sobic010G248200 Sobic007G156500--Sobic002G039500 Sobic007G156500--Sobic001G345333 Sobic007G156500--Sobic007G023700 Sobic008G161401 Sobic008G161401 Sobic007G156500--Sobic008G161401 Sobic010G263800 Sobic010G263800 Sobic001G347600--Sobic010G263800 Sobic001G347600--Sobic007G023700 Sobic001G347600--Sobic004G143700 Sobic002G077200 Sobic002G077200 Sobic001G347600--Sobic002G077200 Sobic009G117400 Sobic009G117400 Sobic001G347600--Sobic009G117400 Sobic007G035600 Sobic007G035600 Sobic001G347600--Sobic007G035600 Sobic001G347600--Sobic007G073400 Sobic001G347600--Sobic007G205800 SobicK016900 SobicK016900 Sobic001G347600--SobicK016900 Sobic006G184300--Sobic002G108800 Sobic006G184300--Sobic007G023700 Sobic006G184300--Sobic007G156500 Sobic006G184300--Sobic002G039500 Sobic008G126200 Sobic008G126200 Sobic006G184300--Sobic008G126200 Sobic004G221900 Sobic004G221900 Sobic006G184300--Sobic004G221900 Sobic005G012000 Sobic005G012000 Sobic006G184300--Sobic005G012000 Sobic009G257300 Sobic009G257300 Sobic006G184300--Sobic009G257300 Sobic006G184300--Sobic003G093600
Octagon: transcription factors


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