Gene annotation
Transcriptome id Sobic.007G150200.1
Synonym Sb07g022440
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
MTD1, putative, expressed
UniProt C5YM44
Pfam -
Panther DB PTHR33172 PTHR33172:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G43850 : -
RAP-DB (Rice) LOC_Os08g35630.1 : MTD1, putative, expressed
MaizeGDB (Corn) Zm00025a005742
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
2 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -
3 Sobic.007G023700 MA3 domain containing protein, expressed -
4 Sobic.003G093600 methyltransferase, putative, expressed -
5 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
6 Sobic.001G225100 expressed protein -
7 Sobic.005G167300 BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
8 Sobic.010G218500 bZIP transcription factor domain containing protein, expressed -
9 Sobic.010G218100 expressed protein -
10 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.001G222300 cyclin-dependent kinase inhibitor, putative, expressed -
12 Sobic.002G221900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
13 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
14 Sobic.003G044900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
15 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
16 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
17 Sobic.002G039500 expressed protein -
18 Sobic.006G184300 OsFBX148 - F-box domain containing protein, expressed -
19 Sobic.001G479300 EAP30/Vps36 family domain containing protein, expressed K12188: SNF8, ESCRT-II complex subunit VPS22
20 Sobic.007G037100 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic007G150200 Sobic007G150200 Sobic002G284200 Sobic002G284200 Sobic007G150200--Sobic002G284200 Sobic003G117000 Sobic003G117000 Sobic007G150200--Sobic003G117000 Sobic007G023700 Sobic007G023700 Sobic007G150200--Sobic007G023700 Sobic003G093600 Sobic003G093600 Sobic007G150200--Sobic003G093600 Sobic004G188300 Sobic004G188300 Sobic007G150200--Sobic004G188300 Sobic001G225100 Sobic001G225100 Sobic007G150200--Sobic001G225100 Sobic005G167300 Sobic005G167300 Sobic007G150200--Sobic005G167300 Sobic010G218500 Sobic010G218500 Sobic007G150200--Sobic010G218500 Sobic010G218100 Sobic010G218100 Sobic007G150200--Sobic010G218100 Sobic002G284200--Sobic003G117000 Sobic002G284200--Sobic007G150200 Sobic001G451000 Sobic001G451000 Sobic002G284200--Sobic001G451000 Sobic007G211000 Sobic007G211000 Sobic002G284200--Sobic007G211000 Sobic002G284200--Sobic003G093600 Sobic007G078000 Sobic007G078000 Sobic002G284200--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic002G284200--Sobic001G439500 Sobic002G165300 Sobic002G165300 Sobic002G284200--Sobic002G165300 Sobic002G283300 Sobic002G283300 Sobic002G284200--Sobic002G283300 Sobic003G117000--Sobic007G211000 Sobic003G117000--Sobic002G284200 Sobic003G117000--Sobic007G150200 Sobic005G117901 Sobic005G117901 Sobic003G117000--Sobic005G117901 Sobic003G117000--Sobic010G218500 Sobic001G024200 Sobic001G024200 Sobic003G117000--Sobic001G024200 Sobic001G243901 Sobic001G243901 Sobic003G117000--Sobic001G243901 Sobic003G121400 Sobic003G121400 Sobic003G117000--Sobic003G121400 Sobic003G036950 Sobic003G036950 Sobic003G117000--Sobic003G036950 Sobic007G023700--Sobic003G093600 Sobic002G039500 Sobic002G039500 Sobic007G023700--Sobic002G039500 Sobic009G180200 Sobic009G180200 Sobic007G023700--Sobic009G180200 Sobic004G143700 Sobic004G143700 Sobic007G023700--Sobic004G143700 Sobic002G108800 Sobic002G108800 Sobic007G023700--Sobic002G108800 Sobic002G221900 Sobic002G221900 Sobic007G023700--Sobic002G221900 Sobic007G156500 Sobic007G156500 Sobic007G023700--Sobic007G156500 Sobic001G347600 Sobic001G347600 Sobic007G023700--Sobic001G347600 Sobic006G184300 Sobic006G184300 Sobic007G023700--Sobic006G184300 Sobic003G093600--Sobic007G023700 Sobic009G022200 Sobic009G022200 Sobic003G093600--Sobic009G022200 Sobic004G271900 Sobic004G271900 Sobic003G093600--Sobic004G271900 Sobic007G205800 Sobic007G205800 Sobic003G093600--Sobic007G205800 Sobic003G093600--Sobic004G143700 Sobic009G156000 Sobic009G156000 Sobic003G093600--Sobic009G156000 Sobic009G087800 Sobic009G087800 Sobic003G093600--Sobic009G087800 Sobic003G258400 Sobic003G258400 Sobic003G093600--Sobic003G258400 Sobic001G424700 Sobic001G424700 Sobic003G093600--Sobic001G424700 Sobic003G026300 Sobic003G026300 Sobic004G188300--Sobic003G026300 Sobic004G188300--Sobic003G093600 Sobic001G222300 Sobic001G222300 Sobic004G188300--Sobic001G222300 Sobic004G188300--Sobic007G150200 Sobic009G183500 Sobic009G183500 Sobic004G188300--Sobic009G183500 Sobic004G188300--Sobic007G023700 Sobic006G257900 Sobic006G257900 Sobic004G188300--Sobic006G257900 Sobic004G188300--Sobic005G167300 Sobic004G188300--Sobic010G218100 Sobic001G225100--Sobic007G150200 Sobic003G296600 Sobic003G296600 Sobic001G225100--Sobic003G296600 Sobic001G247400 Sobic001G247400 Sobic001G225100--Sobic001G247400 Sobic001G032100 Sobic001G032100 Sobic001G225100--Sobic001G032100 Sobic001G225100--Sobic006G257900 Sobic001G225100--Sobic009G183500 Sobic001G225100--Sobic003G093600 Sobic001G225100--Sobic002G284200 Sobic004G221900 Sobic004G221900 Sobic001G225100--Sobic004G221900 Sobic005G167300--Sobic001G451000 Sobic002G115801 Sobic002G115801 Sobic005G167300--Sobic002G115801 Sobic004G198000 Sobic004G198000 Sobic005G167300--Sobic004G198000 Sobic005G167300--Sobic003G026300 Sobic005G167300--Sobic002G284200 SobicK016900 SobicK016900 Sobic005G167300--SobicK016900 Sobic005G167300--Sobic007G150200 Sobic005G167300--Sobic004G188300 Sobic005G167300--Sobic003G117000 Sobic010G248200 Sobic010G248200 Sobic010G218500--Sobic010G248200 Sobic010G218500--Sobic001G243901 Sobic010G218500--Sobic005G117901 Sobic002G253500 Sobic002G253500 Sobic010G218500--Sobic002G253500 Sobic008G101350 Sobic008G101350 Sobic010G218500--Sobic008G101350 Sobic004G096200 Sobic004G096200 Sobic010G218500--Sobic004G096200 Sobic010G218500--Sobic007G211000 Sobic010G218500--Sobic002G108800 Sobic001G345333 Sobic001G345333 Sobic010G218500--Sobic001G345333 Sobic010G218100--Sobic010G218500 Sobic010G218100--Sobic003G117000 Sobic006G122400 Sobic006G122400 Sobic010G218100--Sobic006G122400 Sobic010G218100--Sobic004G188300 Sobic010G218100--Sobic007G150200 Sobic010G218100--Sobic001G222300 Sobic010G218100--Sobic002G039500 Sobic010G218100--Sobic002G253500 Sobic009G242800 Sobic009G242800 Sobic010G218100--Sobic009G242800
Octagon: transcription factors


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