Gene annotation
Transcriptome id Sobic.001G225100.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QKD2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g32930.1 : expressed protein
MaizeGDB (Corn) Zm00025a017665
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G150200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MTD1, putative, expressed -
2 Sobic.003G296600 coiled-coil domain-containing protein 25, putative, expressed -
3 Sobic.001G247400 plant-specific domain TIGR01615 family protein, expressed -
4 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
5 Sobic.006G257900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
6 Sobic.009G183500 expressed protein -
7 Sobic.003G093600 methyltransferase, putative, expressed -
8 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
9 Sobic.004G221900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
10 Sobic.007G023700 MA3 domain containing protein, expressed -
11 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -
12 Sobic.004G207300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
13 Sobic.001G311000 expansin precursor, putative, expressed -
14 Sobic.001G076000 PHLOEM 2-LIKE A10, putative, expressed -
15 Sobic.005G012000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
16 Sobic.005G167300 BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
17 Sobic.009G022000 white-brown complex homolog protein 16, putative, expressed -
18 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
19 Sobic.002G246600 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2


Gene co-expression network
sample Sobic001G225100 Sobic001G225100 Sobic007G150200 Sobic007G150200 Sobic001G225100--Sobic007G150200 Sobic003G296600 Sobic003G296600 Sobic001G225100--Sobic003G296600 Sobic001G247400 Sobic001G247400 Sobic001G225100--Sobic001G247400 Sobic001G032100 Sobic001G032100 Sobic001G225100--Sobic001G032100 Sobic006G257900 Sobic006G257900 Sobic001G225100--Sobic006G257900 Sobic009G183500 Sobic009G183500 Sobic001G225100--Sobic009G183500 Sobic003G093600 Sobic003G093600 Sobic001G225100--Sobic003G093600 Sobic002G284200 Sobic002G284200 Sobic001G225100--Sobic002G284200 Sobic004G221900 Sobic004G221900 Sobic001G225100--Sobic004G221900 Sobic007G150200--Sobic002G284200 Sobic003G117000 Sobic003G117000 Sobic007G150200--Sobic003G117000 Sobic007G023700 Sobic007G023700 Sobic007G150200--Sobic007G023700 Sobic007G150200--Sobic003G093600 Sobic004G188300 Sobic004G188300 Sobic007G150200--Sobic004G188300 Sobic007G150200--Sobic001G225100 Sobic005G167300 Sobic005G167300 Sobic007G150200--Sobic005G167300 Sobic010G218500 Sobic010G218500 Sobic007G150200--Sobic010G218500 Sobic010G218100 Sobic010G218100 Sobic007G150200--Sobic010G218100 Sobic003G296600--Sobic001G032100 Sobic003G293900 Sobic003G293900 Sobic003G296600--Sobic003G293900 Sobic003G296600--Sobic001G247400 Sobic003G296600--Sobic004G221900 Sobic003G296600--Sobic001G225100 Sobic006G194150 Sobic006G194150 Sobic003G296600--Sobic006G194150 Sobic002G246600 Sobic002G246600 Sobic003G296600--Sobic002G246600 Sobic001G230700 Sobic001G230700 Sobic003G296600--Sobic001G230700 Sobic006G184300 Sobic006G184300 Sobic003G296600--Sobic006G184300 Sobic001G247400--Sobic003G296600 Sobic001G247400--Sobic001G032100 Sobic001G247400--Sobic001G225100 Sobic003G034500 Sobic003G034500 Sobic001G247400--Sobic003G034500 Sobic009G022000 Sobic009G022000 Sobic001G247400--Sobic009G022000 Sobic001G247400--Sobic003G293900 Sobic004G164500 Sobic004G164500 Sobic001G247400--Sobic004G164500 Sobic001G311000 Sobic001G311000 Sobic001G247400--Sobic001G311000 Sobic001G247400--Sobic002G246600 Sobic001G032100--Sobic003G296600 Sobic005G085600 Sobic005G085600 Sobic001G032100--Sobic005G085600 Sobic001G032100--Sobic001G247400 Sobic001G032100--Sobic006G194150 Sobic001G032100--Sobic004G221900 Sobic001G032100--Sobic003G034500 Sobic001G032100--Sobic003G293900 Sobic001G032100--Sobic001G225100 Sobic001G032100--Sobic009G183500 Sobic010G071200 Sobic010G071200 Sobic006G257900--Sobic010G071200 Sobic001G149700 Sobic001G149700 Sobic006G257900--Sobic001G149700 Sobic001G478300 Sobic001G478300 Sobic006G257900--Sobic001G478300 Sobic010G154150 Sobic010G154150 Sobic006G257900--Sobic010G154150 Sobic007G063200 Sobic007G063200 Sobic006G257900--Sobic007G063200 Sobic004G231400 Sobic004G231400 Sobic006G257900--Sobic004G231400 Sobic010G055500 Sobic010G055500 Sobic006G257900--Sobic010G055500 Sobic006G257900--Sobic004G188300 Sobic006G257900--Sobic004G164500 Sobic009G183500--Sobic007G023700 Sobic009G183500--Sobic003G093600 Sobic002G221900 Sobic002G221900 Sobic009G183500--Sobic002G221900 Sobic009G183500--Sobic004G188300 Sobic002G039500 Sobic002G039500 Sobic009G183500--Sobic002G039500 Sobic009G183500--Sobic003G034500 Sobic008G126200 Sobic008G126200 Sobic009G183500--Sobic008G126200 Sobic004G143700 Sobic004G143700 Sobic009G183500--Sobic004G143700 Sobic009G183500--Sobic006G257900 Sobic003G093600--Sobic007G023700 Sobic009G022200 Sobic009G022200 Sobic003G093600--Sobic009G022200 Sobic004G271900 Sobic004G271900 Sobic003G093600--Sobic004G271900 Sobic007G205800 Sobic007G205800 Sobic003G093600--Sobic007G205800 Sobic003G093600--Sobic004G143700 Sobic009G156000 Sobic009G156000 Sobic003G093600--Sobic009G156000 Sobic009G087800 Sobic009G087800 Sobic003G093600--Sobic009G087800 Sobic003G258400 Sobic003G258400 Sobic003G093600--Sobic003G258400 Sobic001G424700 Sobic001G424700 Sobic003G093600--Sobic001G424700 Sobic002G284200--Sobic003G117000 Sobic002G284200--Sobic007G150200 Sobic001G451000 Sobic001G451000 Sobic002G284200--Sobic001G451000 Sobic007G211000 Sobic007G211000 Sobic002G284200--Sobic007G211000 Sobic002G284200--Sobic003G093600 Sobic007G078000 Sobic007G078000 Sobic002G284200--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic002G284200--Sobic001G439500 Sobic002G165300 Sobic002G165300 Sobic002G284200--Sobic002G165300 Sobic002G283300 Sobic002G283300 Sobic002G284200--Sobic002G283300 Sobic004G221900--Sobic007G023700 Sobic001G363100 Sobic001G363100 Sobic004G221900--Sobic001G363100 Sobic009G180200 Sobic009G180200 Sobic004G221900--Sobic009G180200 Sobic007G156500 Sobic007G156500 Sobic004G221900--Sobic007G156500 Sobic004G221900--Sobic003G296600 Sobic002G108800 Sobic002G108800 Sobic004G221900--Sobic002G108800 Sobic004G221900--Sobic006G184300 Sobic004G221900--Sobic001G032100 Sobic004G221900--Sobic002G039500
Octagon: transcription factors


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