Gene annotation
| Transcriptome id | Sobic.005G167300.1 |
|---|---|
| Synonym | Sb05g022780, EOL1 |
| Functional annotation | BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed |
| UniProt | C5Y5B4 |
| Pfam | PF00515 PF13414 |
| Panther DB | PTHR23083 PTHR23083:SF430 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0005515; protein binding |
Orthologs (automatic annotation)
| TAIR | AT4G02680 : ETO1-like 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os11g37520.1 : BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed |
| MaizeGDB (Corn) | Zm00025a033913 , Zm00025a015801 |
| Brachypodium | PNT76920 , PNT76921 , KQK20614 , KQJ88072 |
| Barley | HORVU2Hr1G119180.26 , HORVU2Hr1G119180.25 , HORVU2Hr1G119180.24 , HORVU2Hr1G119180.23 , HORVU2Hr1G119180.22 , HORVU2Hr1G119180.21 , HORVU2Hr1G119180.20 , HORVU2Hr1G119180.10 , HORVU2Hr1G119180.11 , HORVU2Hr1G119180.18 , HORVU2Hr1G119180.19 , HORVU2Hr1G119180.16 , HORVU2Hr1G119180.17 , HORVU2Hr1G119180.14 , HORVU2Hr1G119180.15 , HORVU2Hr1G119180.12 , HORVU2Hr1G119180.13 , HORVU2Hr1G119180.8 , HORVU2Hr1G119180.9 , HORVU2Hr1G119180.4 , HORVU2Hr1G119180.5 , HORVU2Hr1G119180.6 , HORVU2Hr1G119180.7 , HORVU2Hr1G119180.1 , HORVU2Hr1G119180.2 , HORVU2Hr1G119180.3 |
| Wheat | TraesCS2A02G591300 , TraesCS2A02G591300 , TraesCS2B02G592500 , TraesCS2D02G562900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G451000 | two-component response regulator, putative, expressed | K14491: two-component response regulator ARR-B family |
| 2 | Sobic.002G115801 | - | - |
| 3 | Sobic.004G198000 | protein kinase domain containing protein, expressed | K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5 |
| 4 | Sobic.003G026300 | BES1/BZR1 homolog protein, putative, expressed | - |
| 5 | Sobic.002G284200 | peroxisomal multifunctional enzyme type 2, putative, expressed | - |
| 6 | Sobic.K016900 | arginyl-tRNA--protein transferase 1, putative, expressed | - |
| 7 | Sobic.007G150200 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MTD1, putative, expressed | - |
| 8 | Sobic.004G188300 | regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed | - |
| 9 | Sobic.003G117000 | late embryogenesis abundant protein, putative, expressed | - |
| 10 | Sobic.003G093600 | methyltransferase, putative, expressed | - |
| 11 | Sobic.003G393300 | two-component response regulator, putative, expressed | K14491: two-component response regulator ARR-B family |
| 12 | Sobic.005G046100 | bZIP transcription factor domain containing protein, expressed | - |
| 13 | Sobic.002G283300 | protein kinase family protein, putative, expressed | - |
| 14 | Sobic.001G439500 | acyl CoA binding protein, putative, expressed | - |
| 15 | Sobic.001G478300 | modifier of rudimentary protein, expressed | K12185: ESCRT-I complex subunit VPS37 |
| 16 | Sobic.001G222300 | cyclin-dependent kinase inhibitor, putative, expressed | - |
| 17 | Sobic.006G209500 | transcription initiation factor IIE subunit beta, putative, expressed | K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta |
| 18 | Sobic.008G025900 | expressed protein | - |
| 19 | Sobic.001G271801 | - | - |
| 20 | Sobic.007G211000 | helix-loop-helix DNA-binding domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
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