Gene annotation
Transcriptome id Sobic.003G393300.1
Synonym Sb03g043080, ARR11
Functional annotation two-component response regulator, putative, expressed
UniProt C5XFH1
Pfam PF00249 PF00072
Panther DB PTHR31442 PTHR31442:SF8
NCBI CDD KOG1601; GATA-4/5/6 transcription factors
KEGG Orthology K14491; two-component response regulator ARR-B family
Gene Ontology GO:0000160; phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT1G67710 : response regulator 11
RAP-DB (Rice) LOC_Os01g67770.1 : two-component response regulator, putative, expressed
MaizeGDB (Corn) Zm00025a039424 , Zm00025a026377
Brachypodium KQK11089 , KQK11088
Barley HORVU3Hr1G088630.6 , HORVU3Hr1G088630.7 , HORVU3Hr1G088630.4 , HORVU3Hr1G088630.2 , HORVU3Hr1G088630.3 , HORVU3Hr1G088630.1 , HORVU3Hr1G088630.10
Wheat TraesCS3B02G423600 , TraesCS3D02G384500 , TraesCS3D02G384500 , TraesCS3A02G391600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.K016900 arginyl-tRNA--protein transferase 1, putative, expressed -
2 Sobic.002G115801 - -
3 Sobic.K009900 autophagy-related protein 8D, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
4 Sobic.004G198000 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
5 Sobic.005G167300 BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
6 Sobic.009G157500 MYB family transcription factor, putative, expressed -
7 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
8 Sobic.001G287301 - -
9 Sobic.001G272000 - -
10 Sobic.001G271801 - -
11 Sobic.008G049701 - -
12 Sobic.002G076400 structural constituent of ribosome, putative, expressed -
13 Sobic.002G410200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
16 Sobic.002G430500 phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
17 Sobic.007G145200 serine esterase family protein, putative, expressed -
18 Sobic.005G139800 Brix domain containing protein, putative, expressed -
19 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
20 Sobic.002G283300 protein kinase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G393300 Sobic003G393300 SobicK016900 SobicK016900 Sobic003G393300--SobicK016900 Sobic002G115801 Sobic002G115801 Sobic003G393300--Sobic002G115801 SobicK009900 SobicK009900 Sobic003G393300--SobicK009900 Sobic004G198000 Sobic004G198000 Sobic003G393300--Sobic004G198000 Sobic005G167300 Sobic005G167300 Sobic003G393300--Sobic005G167300 Sobic009G157500 Sobic009G157500 Sobic003G393300--Sobic009G157500 Sobic001G451000 Sobic001G451000 Sobic003G393300--Sobic001G451000 Sobic001G287301 Sobic001G287301 Sobic003G393300--Sobic001G287301 Sobic001G272000 Sobic001G272000 Sobic003G393300--Sobic001G272000 Sobic002G283300 Sobic002G283300 SobicK016900--Sobic002G283300 Sobic009G156000 Sobic009G156000 SobicK016900--Sobic009G156000 Sobic004G143700 Sobic004G143700 SobicK016900--Sobic004G143700 Sobic007G211000 Sobic007G211000 SobicK016900--Sobic007G211000 SobicK016900--Sobic003G393300 Sobic001G347600 Sobic001G347600 SobicK016900--Sobic001G347600 SobicK016900--Sobic002G115801 SobicK016900--Sobic005G167300 Sobic003G044900 Sobic003G044900 SobicK016900--Sobic003G044900 Sobic002G115801--Sobic001G451000 Sobic002G115801--Sobic005G167300 Sobic002G115801--Sobic001G287301 Sobic002G115801--SobicK009900 Sobic002G115801--SobicK016900 Sobic003G244800 Sobic003G244800 Sobic002G115801--Sobic003G244800 Sobic002G115801--Sobic003G393300 Sobic002G115801--Sobic007G211000 Sobic003G117000 Sobic003G117000 Sobic002G115801--Sobic003G117000 Sobic004G076732 Sobic004G076732 SobicK009900--Sobic004G076732 Sobic005G110430 Sobic005G110430 SobicK009900--Sobic005G110430 Sobic001G253100 Sobic001G253100 SobicK009900--Sobic001G253100 Sobic008G042250 Sobic008G042250 SobicK009900--Sobic008G042250 Sobic008G049701 Sobic008G049701 SobicK009900--Sobic008G049701 Sobic002G410200 Sobic002G410200 SobicK009900--Sobic002G410200 SobicK009900--Sobic001G287301 Sobic005G117801 Sobic005G117801 SobicK009900--Sobic005G117801 Sobic009G209800 Sobic009G209800 SobicK009900--Sobic009G209800 Sobic004G198000--Sobic005G167300 Sobic004G198000--Sobic001G451000 Sobic004G198000--SobicK016900 Sobic004G198000--Sobic003G393300 Sobic004G198000--Sobic002G115801 Sobic001G028400 Sobic001G028400 Sobic004G198000--Sobic001G028400 Sobic003G026300 Sobic003G026300 Sobic004G198000--Sobic003G026300 Sobic007G191100 Sobic007G191100 Sobic004G198000--Sobic007G191100 Sobic001G271801 Sobic001G271801 Sobic004G198000--Sobic001G271801 Sobic005G167300--Sobic001G451000 Sobic005G167300--Sobic002G115801 Sobic005G167300--Sobic004G198000 Sobic005G167300--Sobic003G026300 Sobic002G284200 Sobic002G284200 Sobic005G167300--Sobic002G284200 Sobic005G167300--SobicK016900 Sobic007G150200 Sobic007G150200 Sobic005G167300--Sobic007G150200 Sobic004G188300 Sobic004G188300 Sobic005G167300--Sobic004G188300 Sobic005G167300--Sobic003G117000 Sobic008G025900 Sobic008G025900 Sobic009G157500--Sobic008G025900 Sobic002G224450 Sobic002G224450 Sobic009G157500--Sobic002G224450 Sobic009G157500--Sobic003G393300 Sobic010G101700 Sobic010G101700 Sobic009G157500--Sobic010G101700 Sobic005G139800 Sobic005G139800 Sobic009G157500--Sobic005G139800 Sobic009G157500--Sobic009G209800 Sobic001G055900 Sobic001G055900 Sobic009G157500--Sobic001G055900 Sobic009G157500--Sobic008G049701 Sobic005G110427 Sobic005G110427 Sobic009G157500--Sobic005G110427 Sobic001G451000--Sobic005G167300 Sobic001G451000--Sobic002G115801 Sobic010G260500 Sobic010G260500 Sobic001G451000--Sobic010G260500 Sobic001G451000--Sobic002G284200 Sobic003G333600 Sobic003G333600 Sobic001G451000--Sobic003G333600 Sobic007G078000 Sobic007G078000 Sobic001G451000--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic001G451000--Sobic001G439500 Sobic001G451000--Sobic004G198000 Sobic004G196700 Sobic004G196700 Sobic001G451000--Sobic004G196700 Sobic001G287301--Sobic008G049701 Sobic001G287301--Sobic008G042250 Sobic001G287301--Sobic005G139800 Sobic001G287301--Sobic005G110430 Sobic001G287301--Sobic009G209800 Sobic001G287301--SobicK009900 Sobic008G157950 Sobic008G157950 Sobic001G287301--Sobic008G157950 Sobic001G287301--Sobic001G253100 Sobic001G128800 Sobic001G128800 Sobic001G287301--Sobic001G128800 Sobic001G271900 Sobic001G271900 Sobic001G272000--Sobic001G271900 Sobic001G272000--SobicK009900 Sobic001G272000--Sobic001G287301 Sobic001G024200 Sobic001G024200 Sobic001G272000--Sobic001G024200 Sobic001G272000--Sobic008G049701 Sobic001G543900 Sobic001G543900 Sobic001G272000--Sobic001G543900 Sobic001G272000--Sobic008G042250 Sobic001G272000--Sobic007G211000 Sobic001G272000--Sobic005G110430
Octagon: transcription factors


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