Gene annotation
Transcriptome id Sobic.009G157500.1
Synonym Sb09g022060
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5YYV4
Pfam PF00249
Panther DB PTHR24078 PTHR24078:SF261
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38090 : Duplicated homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os05g37730.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a024152 , Zm00025a023494 , Zm00025a026745 , Zm00025a039576 , Zm00025a043800 , Zm00025a035798 , Zm00025a037205 , Zm00025a039619 , Zm00025a035199 , Zm00025a043782 , Zm00025a026822 , Zm00025a035598
Brachypodium KQK02637 , KQK05980 , KQK04515 , KQK10627 , KQK10731 , PNT71169
Barley HORVU1Hr1G073300.2 , HORVU1Hr1G073300.3 , HORVU1Hr1G073300.1 , HORVU1Hr1G073940.1 , HORVU1Hr1G073940.2 , HORVU1Hr1G073940.3 , HORVU1Hr1G073940.4 , HORVU1Hr1G073940.5 , HORVU1Hr1G073940.6 , HORVU3Hr1G010600.2 , HORVU3Hr1G010600.3 , HORVU3Hr1G010600.1 , HORVU3Hr1G083740.3 , HORVU3Hr1G083740.2 , HORVU3Hr1G083740.1 , HORVU3Hr1G083740.5 , HORVU3Hr1G083740.4 , HORVU3Hr1G085180.3 , HORVU3Hr1G085180.1 , HORVU0Hr1G018970.2 , HORVU0Hr1G018970.1 , HORVU2Hr1G119610.1 , HORVU2Hr1G119610.2 , HORVU2Hr1G119610.3 , HORVU2Hr1G119610.4
Wheat TraesCS3A02G375500 , TraesCS3D02G056100 , TraesCS3D02G360500 , TraesCS7A02G036100 , TraesCS3B02G068800 , TraesCS1A02G278900 , TraesCS3A02G056000 , TraesCS1D02G278200 , TraesCS3A02G056100 , TraesCS3D02G368000 , TraesCS3A02G367600 , TraesCS3B02G068900 , TraesCS2A02G554200 , TraesCS1B02G287700 , TraesCS3B02G407700 , TraesCS3D02G056200 , TraesCS3B02G399300 , TraesCS2B02G589700 , TraesCS7D02G032700 , TraesCS4A02G452600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G025900 expressed protein -
2 Sobic.002G224450 - -
3 Sobic.003G393300 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
4 Sobic.010G101700 - -
5 Sobic.005G139800 Brix domain containing protein, putative, expressed -
6 Sobic.009G209800 OsFBX49 - F-box domain containing protein, expressed -
7 Sobic.001G055900 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
8 Sobic.008G049701 - -
9 Sobic.005G110427 - -
10 Sobic.010G193300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipid phosphatase protein, putative, expressed -
11 Sobic.004G121000 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
12 Sobic.005G221425 - -
13 Sobic.002G115801 - -
14 Sobic.002G410200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.006G068400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@B-block binding subunit of TFIIIC("PubMedID : 26759170,PubMedID : 24597475")@seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
16 Sobic.001G240400 ENT domain containing protein, expressed -
17 Sobic.007G008800 VHS and GAT domain containing protein, expressed -
18 Sobic.008G036500 - -
19 Sobic.002G056100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Leucine Rich Repeat family protein, expressed -
20 Sobic.001G287301 - -


Gene co-expression network
sample Sobic009G157500 Sobic009G157500 Sobic008G025900 Sobic008G025900 Sobic009G157500--Sobic008G025900 Sobic002G224450 Sobic002G224450 Sobic009G157500--Sobic002G224450 Sobic003G393300 Sobic003G393300 Sobic009G157500--Sobic003G393300 Sobic010G101700 Sobic010G101700 Sobic009G157500--Sobic010G101700 Sobic005G139800 Sobic005G139800 Sobic009G157500--Sobic005G139800 Sobic009G209800 Sobic009G209800 Sobic009G157500--Sobic009G209800 Sobic001G055900 Sobic001G055900 Sobic009G157500--Sobic001G055900 Sobic008G049701 Sobic008G049701 Sobic009G157500--Sobic008G049701 Sobic005G110427 Sobic005G110427 Sobic009G157500--Sobic005G110427 Sobic008G025900--Sobic002G224450 Sobic008G025900--Sobic005G139800 Sobic004G121000 Sobic004G121000 Sobic008G025900--Sobic004G121000 Sobic005G221425 Sobic005G221425 Sobic008G025900--Sobic005G221425 Sobic008G025900--Sobic009G209800 Sobic001G240400 Sobic001G240400 Sobic008G025900--Sobic001G240400 Sobic008G025900--Sobic009G157500 Sobic008G025900--Sobic005G110427 Sobic008G025900--Sobic008G049701 Sobic002G224450--Sobic008G025900 Sobic002G224450--Sobic004G121000 Sobic002G224450--Sobic001G240400 Sobic002G224450--Sobic005G221425 Sobic001G287101 Sobic001G287101 Sobic002G224450--Sobic001G287101 Sobic002G224450--Sobic005G139800 Sobic002G224450--Sobic009G209800 Sobic002G224450--Sobic005G110427 Sobic003G436900 Sobic003G436900 Sobic002G224450--Sobic003G436900 SobicK016900 SobicK016900 Sobic003G393300--SobicK016900 Sobic002G115801 Sobic002G115801 Sobic003G393300--Sobic002G115801 SobicK009900 SobicK009900 Sobic003G393300--SobicK009900 Sobic004G198000 Sobic004G198000 Sobic003G393300--Sobic004G198000 Sobic005G167300 Sobic005G167300 Sobic003G393300--Sobic005G167300 Sobic003G393300--Sobic009G157500 Sobic001G451000 Sobic001G451000 Sobic003G393300--Sobic001G451000 Sobic001G287301 Sobic001G287301 Sobic003G393300--Sobic001G287301 Sobic001G272000 Sobic001G272000 Sobic003G393300--Sobic001G272000 Sobic001G184500 Sobic001G184500 Sobic010G101700--Sobic001G184500 Sobic001G278600 Sobic001G278600 Sobic010G101700--Sobic001G278600 Sobic003G351150 Sobic003G351150 Sobic010G101700--Sobic003G351150 Sobic010G101700--Sobic009G157500 Sobic003G266700 Sobic003G266700 Sobic010G101700--Sobic003G266700 Sobic008G065400 Sobic008G065400 Sobic010G101700--Sobic008G065400 Sobic002G079801 Sobic002G079801 Sobic010G101700--Sobic002G079801 Sobic010G101700--Sobic002G224450 Sobic007G005000 Sobic007G005000 Sobic010G101700--Sobic007G005000 Sobic005G139800--Sobic008G049701 Sobic005G139800--Sobic009G209800 Sobic005G139800--Sobic001G287301 Sobic008G042250 Sobic008G042250 Sobic005G139800--Sobic008G042250 Sobic005G139800--Sobic001G240400 Sobic005G117801 Sobic005G117801 Sobic005G139800--Sobic005G117801 Sobic002G056100 Sobic002G056100 Sobic005G139800--Sobic002G056100 Sobic002G410200 Sobic002G410200 Sobic005G139800--Sobic002G410200 Sobic005G139800--Sobic005G221425 Sobic009G209800--Sobic008G049701 Sobic001G253100 Sobic001G253100 Sobic009G209800--Sobic001G253100 Sobic009G209800--Sobic005G139800 Sobic009G209800--Sobic001G240400 Sobic009G209800--Sobic008G042250 Sobic009G209800--Sobic005G117801 Sobic009G209800--Sobic002G056100 Sobic009G209800--Sobic005G221425 Sobic009G209800--Sobic002G410200 Sobic001G055900--Sobic009G157500 Sobic001G055900--Sobic003G351150 Sobic005G096800 Sobic005G096800 Sobic001G055900--Sobic005G096800 Sobic001G055900--Sobic010G101700 Sobic001G055900--Sobic002G224450 Sobic003G119800 Sobic003G119800 Sobic001G055900--Sobic003G119800 Sobic001G055900--Sobic008G025900 Sobic007G144200 Sobic007G144200 Sobic001G055900--Sobic007G144200 Sobic003G026300 Sobic003G026300 Sobic001G055900--Sobic003G026300 Sobic008G049701--Sobic001G287301 Sobic008G049701--Sobic008G042250 Sobic008G049701--Sobic009G209800 Sobic005G110430 Sobic005G110430 Sobic008G049701--Sobic005G110430 Sobic008G049701--Sobic005G139800 Sobic008G049701--Sobic001G253100 Sobic008G049701--Sobic005G117801 Sobic008G049701--SobicK009900 Sobic008G049701--Sobic001G240400 Sobic006G262200 Sobic006G262200 Sobic005G110427--Sobic006G262200 Sobic001G267233 Sobic001G267233 Sobic005G110427--Sobic001G267233 Sobic006G009400 Sobic006G009400 Sobic005G110427--Sobic006G009400 Sobic005G110427--Sobic009G209800 Sobic005G110427--Sobic008G049701 Sobic005G110427--Sobic002G056100 Sobic005G110427--Sobic001G240400 Sobic005G110427--Sobic005G139800 Sobic005G110427--Sobic005G221425
Octagon: transcription factors


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