Gene annotation
Transcriptome id Sobic.001G451000.2,Sobic.001G451000.1
Synonym RR2, Sb01g042400, ARR2
Functional annotation two-component response regulator, putative, expressed
UniProt C5WSM4
Pfam PF00249 PF00072
Panther DB PTHR26402 PTHR26402:SF584
NCBI CDD -
KEGG Orthology K14491; two-component response regulator ARR-B family
Gene Ontology GO:0000160; phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT4G16110 : response regulator 2
RAP-DB (Rice) LOC_Os03g12350.4,LOC_Os03g12350.1 : two-component response regulator, putative, expressed
MaizeGDB (Corn) Zm00025a001380 , Zm00025a053027
Brachypodium KQK22810 , KQK22811 , KQK22809
Barley HORVU4Hr1G066480.2 , HORVU4Hr1G066480.1
Wheat TraesCS4D02G239900 , TraesCS4D02G239900 , TraesCS4B02G240100 , TraesCS4A02G063100
Populus -


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cDNA sequences
Sobic.001G451000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G167300 BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
2 Sobic.002G115801 - -
3 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
4 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
5 Sobic.003G333600 OsFBX29 - F-box domain containing protein, expressed -
6 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
7 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
8 Sobic.004G198000 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
9 Sobic.004G196700 expressed protein -
10 Sobic.007G185900 IBR domain containing protein, putative, expressed K11968: ariadne-1
11 Sobic.001G222300 cyclin-dependent kinase inhibitor, putative, expressed -
12 Sobic.007G145200 serine esterase family protein, putative, expressed -
13 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.002G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
15 Sobic.001G424700 CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2
16 Sobic.003G026300 BES1/BZR1 homolog protein, putative, expressed -
17 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
18 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
19 Sobic.007G037100 MYB family transcription factor, putative, expressed -
20 Sobic.002G283300 protein kinase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G451000 Sobic001G451000 Sobic005G167300 Sobic005G167300 Sobic001G451000--Sobic005G167300 Sobic002G115801 Sobic002G115801 Sobic001G451000--Sobic002G115801 Sobic010G260500 Sobic010G260500 Sobic001G451000--Sobic010G260500 Sobic002G284200 Sobic002G284200 Sobic001G451000--Sobic002G284200 Sobic003G333600 Sobic003G333600 Sobic001G451000--Sobic003G333600 Sobic007G078000 Sobic007G078000 Sobic001G451000--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic001G451000--Sobic001G439500 Sobic004G198000 Sobic004G198000 Sobic001G451000--Sobic004G198000 Sobic004G196700 Sobic004G196700 Sobic001G451000--Sobic004G196700 Sobic005G167300--Sobic001G451000 Sobic005G167300--Sobic002G115801 Sobic005G167300--Sobic004G198000 Sobic003G026300 Sobic003G026300 Sobic005G167300--Sobic003G026300 Sobic005G167300--Sobic002G284200 SobicK016900 SobicK016900 Sobic005G167300--SobicK016900 Sobic007G150200 Sobic007G150200 Sobic005G167300--Sobic007G150200 Sobic004G188300 Sobic004G188300 Sobic005G167300--Sobic004G188300 Sobic003G117000 Sobic003G117000 Sobic005G167300--Sobic003G117000 Sobic002G115801--Sobic001G451000 Sobic002G115801--Sobic005G167300 Sobic001G287301 Sobic001G287301 Sobic002G115801--Sobic001G287301 SobicK009900 SobicK009900 Sobic002G115801--SobicK009900 Sobic002G115801--SobicK016900 Sobic003G244800 Sobic003G244800 Sobic002G115801--Sobic003G244800 Sobic003G393300 Sobic003G393300 Sobic002G115801--Sobic003G393300 Sobic007G211000 Sobic007G211000 Sobic002G115801--Sobic007G211000 Sobic002G115801--Sobic003G117000 Sobic002G157300 Sobic002G157300 Sobic010G260500--Sobic002G157300 Sobic008G174300 Sobic008G174300 Sobic010G260500--Sobic008G174300 Sobic010G260500--Sobic007G078000 Sobic007G185900 Sobic007G185900 Sobic010G260500--Sobic007G185900 Sobic010G033400 Sobic010G033400 Sobic010G260500--Sobic010G033400 Sobic010G260500--Sobic001G451000 Sobic004G263900 Sobic004G263900 Sobic010G260500--Sobic004G263900 Sobic005G149500 Sobic005G149500 Sobic010G260500--Sobic005G149500 Sobic003G187400 Sobic003G187400 Sobic010G260500--Sobic003G187400 Sobic002G284200--Sobic003G117000 Sobic002G284200--Sobic007G150200 Sobic002G284200--Sobic001G451000 Sobic002G284200--Sobic007G211000 Sobic003G093600 Sobic003G093600 Sobic002G284200--Sobic003G093600 Sobic002G284200--Sobic007G078000 Sobic002G284200--Sobic001G439500 Sobic002G165300 Sobic002G165300 Sobic002G284200--Sobic002G165300 Sobic002G283300 Sobic002G283300 Sobic002G284200--Sobic002G283300 Sobic003G333600--Sobic007G078000 Sobic001G424700 Sobic001G424700 Sobic003G333600--Sobic001G424700 Sobic003G333600--Sobic001G451000 Sobic003G333600--Sobic010G260500 Sobic003G333600--Sobic004G196700 Sobic001G372700 Sobic001G372700 Sobic003G333600--Sobic001G372700 Sobic003G333600--Sobic007G185900 Sobic004G153600 Sobic004G153600 Sobic003G333600--Sobic004G153600 Sobic003G333600--Sobic005G149500 Sobic007G078000--Sobic003G333600 Sobic007G078000--Sobic004G196700 Sobic007G078000--Sobic007G185900 Sobic007G078000--Sobic010G260500 Sobic007G078000--Sobic001G424700 Sobic007G078000--Sobic005G149500 Sobic007G078000--Sobic001G372700 Sobic007G078000--Sobic001G451000 Sobic006G082600 Sobic006G082600 Sobic007G078000--Sobic006G082600 Sobic001G024200 Sobic001G024200 Sobic001G439500--Sobic001G024200 Sobic004G143700 Sobic004G143700 Sobic001G439500--Sobic004G143700 Sobic001G439500--Sobic007G211000 Sobic008G116500 Sobic008G116500 Sobic001G439500--Sobic008G116500 Sobic004G112500 Sobic004G112500 Sobic001G439500--Sobic004G112500 Sobic001G439500--Sobic001G451000 Sobic001G543900 Sobic001G543900 Sobic001G439500--Sobic001G543900 Sobic002G001600 Sobic002G001600 Sobic001G439500--Sobic002G001600 Sobic001G439500--Sobic002G283300 Sobic004G198000--Sobic005G167300 Sobic004G198000--Sobic001G451000 Sobic004G198000--SobicK016900 Sobic004G198000--Sobic003G393300 Sobic004G198000--Sobic002G115801 Sobic001G028400 Sobic001G028400 Sobic004G198000--Sobic001G028400 Sobic004G198000--Sobic003G026300 Sobic007G191100 Sobic007G191100 Sobic004G198000--Sobic007G191100 Sobic001G271801 Sobic001G271801 Sobic004G198000--Sobic001G271801 Sobic004G196700--Sobic007G185900 Sobic004G196700--Sobic007G078000 Sobic004G196700--Sobic005G149500 Sobic007G137900 Sobic007G137900 Sobic004G196700--Sobic007G137900 Sobic004G196700--Sobic002G157300 Sobic004G196700--Sobic003G187400 Sobic001G477800 Sobic001G477800 Sobic004G196700--Sobic001G477800 Sobic004G196700--Sobic006G082600 Sobic009G040700 Sobic009G040700 Sobic004G196700--Sobic009G040700
Octagon: transcription factors


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