Gene annotation
Transcriptome id Sobic.003G333600.1,Sobic.003G333600.2,Sobic.003G333600.5,Sobic.003G333600.3
Synonym Sb03g037850
Functional annotation OsFBX29 - F-box domain containing protein, expressed
UniProt A0A1B6Q6Q1 , A0A1B6Q6Q0 , C5XN67 , A0A1B6Q6R4
Pfam -
Panther DB PTHR15537 PTHR15537:SF5 PTHR15537:SF5 PTHR15537
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G08710 : F-box family protein
RAP-DB (Rice) LOC_Os01g59910.1,LOC_Os01g59910.2 : OsFBX29 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a027112
Brachypodium KQK10284
Barley -
Wheat TraesCS3B02G370100 , TraesCS3B02G370100 , TraesCS3D02G332000 , TraesCS3D02G332000 , TraesCS3A02G338500 , TraesCS3A02G338500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
2 Sobic.001G424700 CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2
3 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
4 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
5 Sobic.004G196700 expressed protein -
6 Sobic.001G372700 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
7 Sobic.007G185900 IBR domain containing protein, putative, expressed K11968: ariadne-1
8 Sobic.004G153600 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
9 Sobic.005G149500 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
10 Sobic.007G104800 expressed protein -
11 Sobic.004G205600 bromodomain domain containing protein, expressed -
12 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
13 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
14 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
15 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
16 Sobic.001G497300 protein kinase domain containing protein, expressed -
17 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
18 Sobic.010G026400 BUD13, putative, expressed K13106: BUD13, pre-mRNA-splicing factor CWC26
19 Sobic.003G298100 one zinc finger protein, putative, expressed -
20 Sobic.009G137800 expressed protein -


Gene co-expression network
sample Sobic003G333600 Sobic003G333600 Sobic007G078000 Sobic007G078000 Sobic003G333600--Sobic007G078000 Sobic001G424700 Sobic001G424700 Sobic003G333600--Sobic001G424700 Sobic001G451000 Sobic001G451000 Sobic003G333600--Sobic001G451000 Sobic010G260500 Sobic010G260500 Sobic003G333600--Sobic010G260500 Sobic004G196700 Sobic004G196700 Sobic003G333600--Sobic004G196700 Sobic001G372700 Sobic001G372700 Sobic003G333600--Sobic001G372700 Sobic007G185900 Sobic007G185900 Sobic003G333600--Sobic007G185900 Sobic004G153600 Sobic004G153600 Sobic003G333600--Sobic004G153600 Sobic005G149500 Sobic005G149500 Sobic003G333600--Sobic005G149500 Sobic007G078000--Sobic003G333600 Sobic007G078000--Sobic004G196700 Sobic007G078000--Sobic007G185900 Sobic007G078000--Sobic010G260500 Sobic007G078000--Sobic001G424700 Sobic007G078000--Sobic005G149500 Sobic007G078000--Sobic001G372700 Sobic007G078000--Sobic001G451000 Sobic006G082600 Sobic006G082600 Sobic007G078000--Sobic006G082600 Sobic001G424700--Sobic007G078000 Sobic001G424700--Sobic003G333600 Sobic001G424700--Sobic005G149500 Sobic001G424700--Sobic004G196700 Sobic003G093600 Sobic003G093600 Sobic001G424700--Sobic003G093600 Sobic009G087800 Sobic009G087800 Sobic001G424700--Sobic009G087800 Sobic001G424700--Sobic010G260500 Sobic007G205800 Sobic007G205800 Sobic001G424700--Sobic007G205800 Sobic004G205600 Sobic004G205600 Sobic001G424700--Sobic004G205600 Sobic005G167300 Sobic005G167300 Sobic001G451000--Sobic005G167300 Sobic002G115801 Sobic002G115801 Sobic001G451000--Sobic002G115801 Sobic001G451000--Sobic010G260500 Sobic002G284200 Sobic002G284200 Sobic001G451000--Sobic002G284200 Sobic001G451000--Sobic003G333600 Sobic001G451000--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic001G451000--Sobic001G439500 Sobic004G198000 Sobic004G198000 Sobic001G451000--Sobic004G198000 Sobic001G451000--Sobic004G196700 Sobic002G157300 Sobic002G157300 Sobic010G260500--Sobic002G157300 Sobic008G174300 Sobic008G174300 Sobic010G260500--Sobic008G174300 Sobic010G260500--Sobic007G078000 Sobic010G260500--Sobic007G185900 Sobic010G033400 Sobic010G033400 Sobic010G260500--Sobic010G033400 Sobic010G260500--Sobic001G451000 Sobic004G263900 Sobic004G263900 Sobic010G260500--Sobic004G263900 Sobic010G260500--Sobic005G149500 Sobic003G187400 Sobic003G187400 Sobic010G260500--Sobic003G187400 Sobic004G196700--Sobic007G185900 Sobic004G196700--Sobic007G078000 Sobic004G196700--Sobic005G149500 Sobic007G137900 Sobic007G137900 Sobic004G196700--Sobic007G137900 Sobic004G196700--Sobic002G157300 Sobic004G196700--Sobic003G187400 Sobic001G477800 Sobic001G477800 Sobic004G196700--Sobic001G477800 Sobic004G196700--Sobic006G082600 Sobic009G040700 Sobic009G040700 Sobic004G196700--Sobic009G040700 Sobic001G372700--Sobic007G078000 Sobic001G372700--Sobic003G333600 Sobic004G188400 Sobic004G188400 Sobic001G372700--Sobic004G188400 Sobic001G372700--Sobic004G196700 Sobic001G372700--Sobic006G082600 Sobic001G372700--Sobic002G284200 Sobic010G124001 Sobic010G124001 Sobic001G372700--Sobic010G124001 Sobic007G211000 Sobic007G211000 Sobic001G372700--Sobic007G211000 Sobic002G165300 Sobic002G165300 Sobic001G372700--Sobic002G165300 Sobic007G185900--Sobic004G196700 Sobic007G185900--Sobic002G157300 Sobic007G185900--Sobic007G078000 Sobic007G185900--Sobic010G260500 Sobic002G313300 Sobic002G313300 Sobic007G185900--Sobic002G313300 Sobic008G054500 Sobic008G054500 Sobic007G185900--Sobic008G054500 Sobic003G397800 Sobic003G397800 Sobic007G185900--Sobic003G397800 Sobic007G185900--Sobic005G149500 Sobic007G185900--Sobic003G187400 Sobic004G153600--Sobic001G424700 Sobic003G081100 Sobic003G081100 Sobic004G153600--Sobic003G081100 Sobic004G153600--Sobic003G333600 Sobic009G137800 Sobic009G137800 Sobic004G153600--Sobic009G137800 Sobic004G153600--Sobic010G260500 Sobic004G153600--Sobic007G078000 Sobic003G324000 Sobic003G324000 Sobic004G153600--Sobic003G324000 Sobic004G153600--Sobic002G284200 Sobic008G094700 Sobic008G094700 Sobic004G153600--Sobic008G094700 Sobic005G149500--Sobic003G187400 Sobic005G149500--Sobic002G157300 Sobic005G149500--Sobic009G040700 Sobic005G149500--Sobic004G196700 Sobic007G011400 Sobic007G011400 Sobic005G149500--Sobic007G011400 Sobic006G060100 Sobic006G060100 Sobic005G149500--Sobic006G060100 Sobic005G149500--Sobic007G185900 Sobic005G149500--Sobic007G137900 Sobic005G149500--Sobic007G078000
Octagon: transcription factors


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