Gene annotation
Transcriptome id Sobic.001G372700.1
Synonym Sb01g035400, B-box (BBX) protein, SbBBX2
Functional annotation B-box (BBX) protein (PubMedID : 30626335)
CCT/B-box zinc finger protein, putative, expressed
UniProt C5WZT5
Pfam PF06203
Panther DB PTHR31717 PTHR31717:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G33500 : B-box type zinc finger protein with CCT domain
RAP-DB (Rice) LOC_Os03g22770.1 : CCT/B-box zinc finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a002457
Brachypodium KQK21685
Barley -
Wheat TraesCS4D02G167300 , TraesCS4D02G167300 , TraesCS4B02G155800 , TraesCS4B02G155800 , TraesCS4D02G167300 , TraesCS4A02G140600 , TraesCS4A02G140600 , TraesCS4A02G140600 , TraesCS4A02G140600 , TraesCS4A02G140600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
2 Sobic.003G333600 OsFBX29 - F-box domain containing protein, expressed -
3 Sobic.004G188400 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
4 Sobic.004G196700 expressed protein -
5 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
6 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
7 Sobic.010G124001 - -
8 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.002G165300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
10 Sobic.001G424700 CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08269: ULK2, serine/threonine-protein kinase ULK2
11 Sobic.002G203200 - -
12 Sobic.001G543800 ethylene-responsive element-binding protein, putative, expressed -
13 Sobic.003G061300 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01568: PDC, pyruvate decarboxylase
14 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
15 Sobic.007G037900 oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed -
16 Sobic.001G479500 dihydroflavonol-4-reductase, putative, expressed K15891: NAD+-dependent farnesol dehydrogenase
17 Sobic.002G166700 cyclin, putative, expressed -
18 Sobic.009G140500 no apical meristem protein, putative, expressed -
19 Sobic.007G037100 MYB family transcription factor, putative, expressed -
20 Sobic.004G065650 - -


Gene co-expression network
sample Sobic001G372700 Sobic001G372700 Sobic007G078000 Sobic007G078000 Sobic001G372700--Sobic007G078000 Sobic003G333600 Sobic003G333600 Sobic001G372700--Sobic003G333600 Sobic004G188400 Sobic004G188400 Sobic001G372700--Sobic004G188400 Sobic004G196700 Sobic004G196700 Sobic001G372700--Sobic004G196700 Sobic006G082600 Sobic006G082600 Sobic001G372700--Sobic006G082600 Sobic002G284200 Sobic002G284200 Sobic001G372700--Sobic002G284200 Sobic010G124001 Sobic010G124001 Sobic001G372700--Sobic010G124001 Sobic007G211000 Sobic007G211000 Sobic001G372700--Sobic007G211000 Sobic002G165300 Sobic002G165300 Sobic001G372700--Sobic002G165300 Sobic007G078000--Sobic003G333600 Sobic007G078000--Sobic004G196700 Sobic007G185900 Sobic007G185900 Sobic007G078000--Sobic007G185900 Sobic010G260500 Sobic010G260500 Sobic007G078000--Sobic010G260500 Sobic001G424700 Sobic001G424700 Sobic007G078000--Sobic001G424700 Sobic005G149500 Sobic005G149500 Sobic007G078000--Sobic005G149500 Sobic007G078000--Sobic001G372700 Sobic001G451000 Sobic001G451000 Sobic007G078000--Sobic001G451000 Sobic007G078000--Sobic006G082600 Sobic003G333600--Sobic007G078000 Sobic003G333600--Sobic001G424700 Sobic003G333600--Sobic001G451000 Sobic003G333600--Sobic010G260500 Sobic003G333600--Sobic004G196700 Sobic003G333600--Sobic001G372700 Sobic003G333600--Sobic007G185900 Sobic004G153600 Sobic004G153600 Sobic003G333600--Sobic004G153600 Sobic003G333600--Sobic005G149500 Sobic004G188400--Sobic001G372700 Sobic004G065650 Sobic004G065650 Sobic004G188400--Sobic004G065650 Sobic009G127900 Sobic009G127900 Sobic004G188400--Sobic009G127900 Sobic003G268300 Sobic003G268300 Sobic004G188400--Sobic003G268300 Sobic004G188400--Sobic006G082600 Sobic005G110472 Sobic005G110472 Sobic004G188400--Sobic005G110472 Sobic004G188400--Sobic004G196700 Sobic007G037900 Sobic007G037900 Sobic004G188400--Sobic007G037900 Sobic004G188400--Sobic002G165300 Sobic004G196700--Sobic007G185900 Sobic004G196700--Sobic007G078000 Sobic004G196700--Sobic005G149500 Sobic007G137900 Sobic007G137900 Sobic004G196700--Sobic007G137900 Sobic002G157300 Sobic002G157300 Sobic004G196700--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic004G196700--Sobic003G187400 Sobic001G477800 Sobic001G477800 Sobic004G196700--Sobic001G477800 Sobic004G196700--Sobic006G082600 Sobic009G040700 Sobic009G040700 Sobic004G196700--Sobic009G040700 Sobic001G162300 Sobic001G162300 Sobic006G082600--Sobic001G162300 Sobic007G178700 Sobic007G178700 Sobic006G082600--Sobic007G178700 Sobic007G037100 Sobic007G037100 Sobic006G082600--Sobic007G037100 Sobic001G251700 Sobic001G251700 Sobic006G082600--Sobic001G251700 Sobic006G082600--Sobic004G196700 Sobic009G134500 Sobic009G134500 Sobic006G082600--Sobic009G134500 Sobic006G082600--Sobic010G124001 Sobic006G082600--Sobic009G127900 Sobic002G157000 Sobic002G157000 Sobic006G082600--Sobic002G157000 Sobic003G117000 Sobic003G117000 Sobic002G284200--Sobic003G117000 Sobic007G150200 Sobic007G150200 Sobic002G284200--Sobic007G150200 Sobic002G284200--Sobic001G451000 Sobic002G284200--Sobic007G211000 Sobic003G093600 Sobic003G093600 Sobic002G284200--Sobic003G093600 Sobic002G284200--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic002G284200--Sobic001G439500 Sobic002G284200--Sobic002G165300 Sobic002G283300 Sobic002G283300 Sobic002G284200--Sobic002G283300 Sobic010G124001--Sobic007G211000 Sobic002G203200 Sobic002G203200 Sobic010G124001--Sobic002G203200 Sobic006G088580 Sobic006G088580 Sobic010G124001--Sobic006G088580 Sobic004G112500 Sobic004G112500 Sobic010G124001--Sobic004G112500 Sobic010G124001--Sobic006G082600 Sobic001G271900 Sobic001G271900 Sobic010G124001--Sobic001G271900 Sobic001G543900 Sobic001G543900 Sobic010G124001--Sobic001G543900 Sobic010G124001--Sobic007G037900 Sobic010G124001--Sobic007G037100 Sobic001G024200 Sobic001G024200 Sobic007G211000--Sobic001G024200 Sobic007G211000--Sobic004G112500 Sobic007G211000--Sobic010G124001 Sobic007G211000--Sobic003G117000 Sobic001G272000 Sobic001G272000 Sobic007G211000--Sobic001G272000 Sobic001G243901 Sobic001G243901 Sobic007G211000--Sobic001G243901 Sobic005G117901 Sobic005G117901 Sobic007G211000--Sobic005G117901 Sobic004G212800 Sobic004G212800 Sobic007G211000--Sobic004G212800 Sobic010G248200 Sobic010G248200 Sobic007G211000--Sobic010G248200 Sobic009G156000 Sobic009G156000 Sobic002G165300--Sobic009G156000 Sobic002G165300--Sobic004G196700 Sobic002G165300--Sobic005G149500 Sobic002G165300--Sobic007G211000 Sobic010G199600 Sobic010G199600 Sobic002G165300--Sobic010G199600 Sobic002G165300--Sobic007G078000 Sobic002G165300--Sobic002G284200 Sobic010G026400 Sobic010G026400 Sobic002G165300--Sobic010G026400 Sobic002G165300--Sobic007G037100
Octagon: transcription factors


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