Gene annotation
Transcriptome id Sobic.004G207300.1
Synonym Sb04g025270, J8
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
heat shock protein DnaJ, putative, expressed
UniProt C5XX70
Pfam PF00226
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G80920 : Chaperone DnaJ-domain superfamily protein
RAP-DB (Rice) LOC_Os06g44160.1 : heat shock protein DnaJ, putative, expressed
MaizeGDB (Corn) Zm00025a051611
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.004G207300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -
2 Sobic.001G225100 expressed protein -
3 Sobic.007G150200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MTD1, putative, expressed -
4 Sobic.002G221900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
5 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
6 Sobic.007G023700 MA3 domain containing protein, expressed -
7 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
8 Sobic.007G211000 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.004G153600 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
10 Sobic.009G183500 expressed protein -
11 Sobic.010G218500 bZIP transcription factor domain containing protein, expressed -
12 Sobic.009G022000 white-brown complex homolog protein 16, putative, expressed -
13 Sobic.006G134100 carbonyl reductase 3, putative, expressed -
14 Sobic.003G093600 methyltransferase, putative, expressed -
15 Sobic.007G154701 - -
16 Sobic.001G372700 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
17 Sobic.003G324000 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed K00074: paaH, hbd, fadB, 3-hydroxybutyryl-CoA dehydrogenase
18 Sobic.006G122400 uncharacterized glycosyltransferase, putative, expressed -
19 Sobic.008G101350 - -
20 Sobic.010G248200 KID-containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G207300 Sobic004G207300 Sobic003G117000 Sobic003G117000 Sobic004G207300--Sobic003G117000 Sobic001G225100 Sobic001G225100 Sobic004G207300--Sobic001G225100 Sobic007G150200 Sobic007G150200 Sobic004G207300--Sobic007G150200 Sobic002G221900 Sobic002G221900 Sobic004G207300--Sobic002G221900 Sobic004G188300 Sobic004G188300 Sobic004G207300--Sobic004G188300 Sobic007G023700 Sobic007G023700 Sobic004G207300--Sobic007G023700 Sobic002G284200 Sobic002G284200 Sobic004G207300--Sobic002G284200 Sobic007G211000 Sobic007G211000 Sobic004G207300--Sobic007G211000 Sobic004G153600 Sobic004G153600 Sobic004G207300--Sobic004G153600 Sobic003G117000--Sobic007G211000 Sobic003G117000--Sobic002G284200 Sobic003G117000--Sobic007G150200 Sobic005G117901 Sobic005G117901 Sobic003G117000--Sobic005G117901 Sobic010G218500 Sobic010G218500 Sobic003G117000--Sobic010G218500 Sobic001G024200 Sobic001G024200 Sobic003G117000--Sobic001G024200 Sobic001G243901 Sobic001G243901 Sobic003G117000--Sobic001G243901 Sobic003G121400 Sobic003G121400 Sobic003G117000--Sobic003G121400 Sobic003G036950 Sobic003G036950 Sobic003G117000--Sobic003G036950 Sobic001G225100--Sobic007G150200 Sobic003G296600 Sobic003G296600 Sobic001G225100--Sobic003G296600 Sobic001G247400 Sobic001G247400 Sobic001G225100--Sobic001G247400 Sobic001G032100 Sobic001G032100 Sobic001G225100--Sobic001G032100 Sobic006G257900 Sobic006G257900 Sobic001G225100--Sobic006G257900 Sobic009G183500 Sobic009G183500 Sobic001G225100--Sobic009G183500 Sobic003G093600 Sobic003G093600 Sobic001G225100--Sobic003G093600 Sobic001G225100--Sobic002G284200 Sobic004G221900 Sobic004G221900 Sobic001G225100--Sobic004G221900 Sobic007G150200--Sobic002G284200 Sobic007G150200--Sobic003G117000 Sobic007G150200--Sobic007G023700 Sobic007G150200--Sobic003G093600 Sobic007G150200--Sobic004G188300 Sobic007G150200--Sobic001G225100 Sobic005G167300 Sobic005G167300 Sobic007G150200--Sobic005G167300 Sobic007G150200--Sobic010G218500 Sobic010G218100 Sobic010G218100 Sobic007G150200--Sobic010G218100 Sobic002G221900--Sobic007G023700 Sobic002G108800 Sobic002G108800 Sobic002G221900--Sobic002G108800 Sobic007G156500 Sobic007G156500 Sobic002G221900--Sobic007G156500 Sobic003G044900 Sobic003G044900 Sobic002G221900--Sobic003G044900 Sobic002G253500 Sobic002G253500 Sobic002G221900--Sobic002G253500 Sobic002G221900--Sobic001G024200 Sobic002G039500 Sobic002G039500 Sobic002G221900--Sobic002G039500 Sobic004G143700 Sobic004G143700 Sobic002G221900--Sobic004G143700 Sobic003G204000 Sobic003G204000 Sobic002G221900--Sobic003G204000 Sobic003G026300 Sobic003G026300 Sobic004G188300--Sobic003G026300 Sobic004G188300--Sobic003G093600 Sobic001G222300 Sobic001G222300 Sobic004G188300--Sobic001G222300 Sobic004G188300--Sobic007G150200 Sobic004G188300--Sobic009G183500 Sobic004G188300--Sobic007G023700 Sobic004G188300--Sobic006G257900 Sobic004G188300--Sobic005G167300 Sobic004G188300--Sobic010G218100 Sobic007G023700--Sobic003G093600 Sobic007G023700--Sobic002G039500 Sobic009G180200 Sobic009G180200 Sobic007G023700--Sobic009G180200 Sobic007G023700--Sobic004G143700 Sobic007G023700--Sobic002G108800 Sobic007G023700--Sobic002G221900 Sobic007G023700--Sobic007G156500 Sobic001G347600 Sobic001G347600 Sobic007G023700--Sobic001G347600 Sobic006G184300 Sobic006G184300 Sobic007G023700--Sobic006G184300 Sobic002G284200--Sobic003G117000 Sobic002G284200--Sobic007G150200 Sobic001G451000 Sobic001G451000 Sobic002G284200--Sobic001G451000 Sobic002G284200--Sobic007G211000 Sobic002G284200--Sobic003G093600 Sobic007G078000 Sobic007G078000 Sobic002G284200--Sobic007G078000 Sobic001G439500 Sobic001G439500 Sobic002G284200--Sobic001G439500 Sobic002G165300 Sobic002G165300 Sobic002G284200--Sobic002G165300 Sobic002G283300 Sobic002G283300 Sobic002G284200--Sobic002G283300 Sobic007G211000--Sobic001G024200 Sobic004G112500 Sobic004G112500 Sobic007G211000--Sobic004G112500 Sobic010G124001 Sobic010G124001 Sobic007G211000--Sobic010G124001 Sobic007G211000--Sobic003G117000 Sobic001G272000 Sobic001G272000 Sobic007G211000--Sobic001G272000 Sobic007G211000--Sobic001G243901 Sobic007G211000--Sobic005G117901 Sobic004G212800 Sobic004G212800 Sobic007G211000--Sobic004G212800 Sobic010G248200 Sobic010G248200 Sobic007G211000--Sobic010G248200 Sobic001G424700 Sobic001G424700 Sobic004G153600--Sobic001G424700 Sobic003G081100 Sobic003G081100 Sobic004G153600--Sobic003G081100 Sobic003G333600 Sobic003G333600 Sobic004G153600--Sobic003G333600 Sobic009G137800 Sobic009G137800 Sobic004G153600--Sobic009G137800 Sobic010G260500 Sobic010G260500 Sobic004G153600--Sobic010G260500 Sobic004G153600--Sobic007G078000 Sobic003G324000 Sobic003G324000 Sobic004G153600--Sobic003G324000 Sobic004G153600--Sobic002G284200 Sobic008G094700 Sobic008G094700 Sobic004G153600--Sobic008G094700
Octagon: transcription factors


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