Gene annotation
Transcriptome id Sobic.009G022000.1
Synonym Sb09g001900
Functional annotation white-brown complex homolog protein 16, putative, expressed
UniProt C5YYZ9
Pfam PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF294
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT3G55090 : ABC-2 type transporter family protein
RAP-DB (Rice) LOC_Os05g02890.1 : white-brown complex homolog protein 16, putative, expressed
MaizeGDB (Corn) Zm00025a038219 , Zm00025a001906 , Zm00025a039705 , Zm00025a040796
Brachypodium KQK22254 , KQK21748 , KQK22252
Barley HORVU4Hr1G058160.1 , HORVU4Hr1G058160.2 , HORVU5Hr1G021120.1 , HORVU5Hr1G021120.2 , HORVU3Hr1G007180.1 , HORVU0Hr1G007130.2 , HORVU0Hr1G007130.1 , HORVU1Hr1G009920.3 , HORVU1Hr1G009920.2 , HORVU1Hr1G009920.1 , HORVU4Hr1G058070.2 , HORVU4Hr1G058070.3 , HORVU4Hr1G058070.1 , HORVU3Hr1G087130.1 , HORVU3Hr1G087130.2
Wheat TraesCS1A02G049600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G150200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MTD1, putative, expressed -
2 Sobic.007G023700 MA3 domain containing protein, expressed -
3 Sobic.003G093600 methyltransferase, putative, expressed -
4 Sobic.001G247400 plant-specific domain TIGR01615 family protein, expressed -
5 Sobic.009G183500 expressed protein -
6 Sobic.007G154701 - -
7 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
8 Sobic.001G225100 expressed protein -
9 Sobic.004G153600 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
10 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
11 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
12 Sobic.005G012000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
13 Sobic.003G044900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
14 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
15 Sobic.004G119000 OsFBK6 - F-box domain and kelch repeat containing protein, expressed -
16 Sobic.007G035600 MSP domain containing protein, putative, expressed -
17 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
18 Sobic.006G184300 OsFBX148 - F-box domain containing protein, expressed -
19 Sobic.003G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.003G296600 coiled-coil domain-containing protein 25, putative, expressed -


Gene co-expression network
sample Sobic009G022000 Sobic009G022000 Sobic007G150200 Sobic007G150200 Sobic009G022000--Sobic007G150200 Sobic007G023700 Sobic007G023700 Sobic009G022000--Sobic007G023700 Sobic003G093600 Sobic003G093600 Sobic009G022000--Sobic003G093600 Sobic001G247400 Sobic001G247400 Sobic009G022000--Sobic001G247400 Sobic009G183500 Sobic009G183500 Sobic009G022000--Sobic009G183500 Sobic007G154701 Sobic007G154701 Sobic009G022000--Sobic007G154701 Sobic004G150400 Sobic004G150400 Sobic009G022000--Sobic004G150400 Sobic001G225100 Sobic001G225100 Sobic009G022000--Sobic001G225100 Sobic004G153600 Sobic004G153600 Sobic009G022000--Sobic004G153600 Sobic002G284200 Sobic002G284200 Sobic007G150200--Sobic002G284200 Sobic003G117000 Sobic003G117000 Sobic007G150200--Sobic003G117000 Sobic007G150200--Sobic007G023700 Sobic007G150200--Sobic003G093600 Sobic004G188300 Sobic004G188300 Sobic007G150200--Sobic004G188300 Sobic007G150200--Sobic001G225100 Sobic005G167300 Sobic005G167300 Sobic007G150200--Sobic005G167300 Sobic010G218500 Sobic010G218500 Sobic007G150200--Sobic010G218500 Sobic010G218100 Sobic010G218100 Sobic007G150200--Sobic010G218100 Sobic007G023700--Sobic003G093600 Sobic002G039500 Sobic002G039500 Sobic007G023700--Sobic002G039500 Sobic009G180200 Sobic009G180200 Sobic007G023700--Sobic009G180200 Sobic004G143700 Sobic004G143700 Sobic007G023700--Sobic004G143700 Sobic002G108800 Sobic002G108800 Sobic007G023700--Sobic002G108800 Sobic002G221900 Sobic002G221900 Sobic007G023700--Sobic002G221900 Sobic007G156500 Sobic007G156500 Sobic007G023700--Sobic007G156500 Sobic001G347600 Sobic001G347600 Sobic007G023700--Sobic001G347600 Sobic006G184300 Sobic006G184300 Sobic007G023700--Sobic006G184300 Sobic003G093600--Sobic007G023700 Sobic009G022200 Sobic009G022200 Sobic003G093600--Sobic009G022200 Sobic004G271900 Sobic004G271900 Sobic003G093600--Sobic004G271900 Sobic007G205800 Sobic007G205800 Sobic003G093600--Sobic007G205800 Sobic003G093600--Sobic004G143700 Sobic009G156000 Sobic009G156000 Sobic003G093600--Sobic009G156000 Sobic009G087800 Sobic009G087800 Sobic003G093600--Sobic009G087800 Sobic003G258400 Sobic003G258400 Sobic003G093600--Sobic003G258400 Sobic001G424700 Sobic001G424700 Sobic003G093600--Sobic001G424700 Sobic003G296600 Sobic003G296600 Sobic001G247400--Sobic003G296600 Sobic001G032100 Sobic001G032100 Sobic001G247400--Sobic001G032100 Sobic001G247400--Sobic001G225100 Sobic003G034500 Sobic003G034500 Sobic001G247400--Sobic003G034500 Sobic001G247400--Sobic009G022000 Sobic003G293900 Sobic003G293900 Sobic001G247400--Sobic003G293900 Sobic004G164500 Sobic004G164500 Sobic001G247400--Sobic004G164500 Sobic001G311000 Sobic001G311000 Sobic001G247400--Sobic001G311000 Sobic002G246600 Sobic002G246600 Sobic001G247400--Sobic002G246600 Sobic009G183500--Sobic007G023700 Sobic009G183500--Sobic003G093600 Sobic009G183500--Sobic002G221900 Sobic009G183500--Sobic004G188300 Sobic009G183500--Sobic002G039500 Sobic009G183500--Sobic003G034500 Sobic008G126200 Sobic008G126200 Sobic009G183500--Sobic008G126200 Sobic009G183500--Sobic004G143700 Sobic006G257900 Sobic006G257900 Sobic009G183500--Sobic006G257900 Sobic004G325900 Sobic004G325900 Sobic007G154701--Sobic004G325900 Sobic007G154701--Sobic009G022000 Sobic007G002200 Sobic007G002200 Sobic007G154701--Sobic007G002200 Sobic007G154701--Sobic001G225100 Sobic008G094700 Sobic008G094700 Sobic007G154701--Sobic008G094700 Sobic007G154701--Sobic004G153600 Sobic001G076000 Sobic001G076000 Sobic007G154701--Sobic001G076000 Sobic007G154701--Sobic001G247400 Sobic007G154701--Sobic009G183500 Sobic004G119000 Sobic004G119000 Sobic004G150400--Sobic004G119000 Sobic010G055500 Sobic010G055500 Sobic004G150400--Sobic010G055500 Sobic004G150400--Sobic007G205800 Sobic002G272800 Sobic002G272800 Sobic004G150400--Sobic002G272800 Sobic010G071200 Sobic010G071200 Sobic004G150400--Sobic010G071200 Sobic001G028400 Sobic001G028400 Sobic004G150400--Sobic001G028400 Sobic006G088100 Sobic006G088100 Sobic004G150400--Sobic006G088100 Sobic004G150400--Sobic003G093600 Sobic006G109300 Sobic006G109300 Sobic004G150400--Sobic006G109300 Sobic001G225100--Sobic007G150200 Sobic001G225100--Sobic003G296600 Sobic001G225100--Sobic001G247400 Sobic001G225100--Sobic001G032100 Sobic001G225100--Sobic006G257900 Sobic001G225100--Sobic009G183500 Sobic001G225100--Sobic003G093600 Sobic001G225100--Sobic002G284200 Sobic004G221900 Sobic004G221900 Sobic001G225100--Sobic004G221900 Sobic004G153600--Sobic001G424700 Sobic003G081100 Sobic003G081100 Sobic004G153600--Sobic003G081100 Sobic003G333600 Sobic003G333600 Sobic004G153600--Sobic003G333600 Sobic009G137800 Sobic009G137800 Sobic004G153600--Sobic009G137800 Sobic010G260500 Sobic010G260500 Sobic004G153600--Sobic010G260500 Sobic007G078000 Sobic007G078000 Sobic004G153600--Sobic007G078000 Sobic003G324000 Sobic003G324000 Sobic004G153600--Sobic003G324000 Sobic004G153600--Sobic002G284200 Sobic004G153600--Sobic008G094700
Octagon: transcription factors


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