Gene annotation
Transcriptome id Sobic.004G150400.1
Synonym HSFA5, Sb04g020050, AT-HSFA5
Functional annotation HSF-type DNA-binding domain containing protein, expressed
UniProt C5XSG6
Pfam PF00447
Panther DB PTHR10015 PTHR10015:SF157
NCBI CDD -
KEGG Orthology K09419; heat shock transcription factor, other eukaryote
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G13980 : winged-helix DNA-binding transcription factor family protein
RAP-DB (Rice) LOC_Os02g29340.1 : HSF-type DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a045167 , Zm00025a015267 , Zm00025a038009 , Zm00025a040051 , Zm00025a051078 , Zm00025a008557 , Zm00025a048930 , Zm00025a002613 , Zm00025a033648 , Zm00025a016308 , Zm00025a020360
Brachypodium KQJ99525 , KQK12029 , KQK05247 , KQK14978 , KQK14979 , KQK05248 , PNT68735 , KQK18031 , KQK12714 , KQK18032 , KQJ99265 , PNT77358 , PNT72861 , PNT72862 , KQK12030 , PNT70844 , KQJ99684 , KQK21569 , KQK23525 , KQK09735 , KQK23526
Barley HORVU2Hr1G026020.1 , HORVU3Hr1G071550.1 , HORVU1Hr1G081300.5 , HORVU3Hr1G071550.3 , HORVU3Hr1G071550.2 , HORVU1Hr1G081300.4 , HORVU1Hr1G081300.3 , HORVU1Hr1G081300.2 , HORVU3Hr1G071550.4 , HORVU1Hr1G081300.1 , HORVU7Hr1G088920.2 , HORVU7Hr1G088920.3 , HORVU7Hr1G088920.1 , HORVU3Hr1G071550.5 , HORVU6Hr1G017910.2 , HORVU6Hr1G017910.1 , HORVU5Hr1G105770.4 , HORVU5Hr1G105770.1 , HORVU5Hr1G105770.3 , HORVU5Hr1G105770.2
Wheat TraesCS3B02G323800 , TraesCS2D02G211400 , TraesCS3A02G289200 , TraesCS2A02G146600 , TraesCS7A02G355300 , TraesCS7D02G367700 , TraesCS6B02G127000 , TraesCS2B02G171900 , TraesCS2B02G232000 , TraesCS2B02G232000 , TraesCS2A02G204500 , TraesCS3A02G393100 , TraesCS2A02G204500 , TraesCS6A02G098800 , TraesCS2D02G211400 , TraesCS6D02G083800 , TraesCS7B02G272500 , TraesCS2D02G151200
Populus PNT39523


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G119000 OsFBK6 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
3 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
4 Sobic.002G272800 mediator of RNA polymerase II transcription subunit 10, putative, expressed K15151: MED10, mediator of RNA polymerase II transcription subunit 10
5 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
6 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
7 Sobic.006G088100 coiled-coil domain-containing protein 55, putative, expressed K13206: coiled-coil domain-containing protein 55
8 Sobic.003G093600 methyltransferase, putative, expressed -
9 Sobic.006G109300 protein binding protein, putative, expressed -
10 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
11 Sobic.001G479300 EAP30/Vps36 family domain containing protein, expressed K12188: SNF8, ESCRT-II complex subunit VPS22
12 Sobic.004G263900 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
13 Sobic.004G231400 OsAPRL3 adenosine 5\'-phosphosulfate reductase-like OsAPRL3, expressed -
14 Sobic.003G437500 syntaxin 6, putative, expressed -
15 Sobic.003G185200 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
16 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
17 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
18 Sobic.003G154700 stripe rust resistance protein Yr10, putative, expressed -
19 Sobic.010G000700 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
20 Sobic.009G087800 seven in absentia protein family domain containing protein, expressed K08742: E3 ubiquitin-protein ligase SIAH2


Gene co-expression network
sample Sobic004G150400 Sobic004G150400 Sobic004G119000 Sobic004G119000 Sobic004G150400--Sobic004G119000 Sobic010G055500 Sobic010G055500 Sobic004G150400--Sobic010G055500 Sobic007G205800 Sobic007G205800 Sobic004G150400--Sobic007G205800 Sobic002G272800 Sobic002G272800 Sobic004G150400--Sobic002G272800 Sobic010G071200 Sobic010G071200 Sobic004G150400--Sobic010G071200 Sobic001G028400 Sobic001G028400 Sobic004G150400--Sobic001G028400 Sobic006G088100 Sobic006G088100 Sobic004G150400--Sobic006G088100 Sobic003G093600 Sobic003G093600 Sobic004G150400--Sobic003G093600 Sobic006G109300 Sobic006G109300 Sobic004G150400--Sobic006G109300 Sobic004G119000--Sobic004G150400 Sobic010G280100 Sobic010G280100 Sobic004G119000--Sobic010G280100 Sobic001G291100 Sobic001G291100 Sobic004G119000--Sobic001G291100 Sobic003G185200 Sobic003G185200 Sobic004G119000--Sobic003G185200 Sobic004G119000--Sobic002G272800 Sobic009G087800 Sobic009G087800 Sobic004G119000--Sobic009G087800 Sobic010G268300 Sobic010G268300 Sobic004G119000--Sobic010G268300 Sobic002G365100 Sobic002G365100 Sobic004G119000--Sobic002G365100 Sobic004G119000--Sobic007G205800 Sobic010G055500--Sobic010G071200 Sobic004G263900 Sobic004G263900 Sobic010G055500--Sobic004G263900 Sobic001G149700 Sobic001G149700 Sobic010G055500--Sobic001G149700 Sobic004G231400 Sobic004G231400 Sobic010G055500--Sobic004G231400 Sobic001G512900 Sobic001G512900 Sobic010G055500--Sobic001G512900 Sobic010G055500--Sobic006G109300 Sobic001G390500 Sobic001G390500 Sobic010G055500--Sobic001G390500 Sobic008G142700 Sobic008G142700 Sobic010G055500--Sobic008G142700 Sobic010G055500--Sobic004G150400 Sobic007G011400 Sobic007G011400 Sobic007G205800--Sobic007G011400 Sobic007G205800--Sobic009G087800 Sobic010G263800 Sobic010G263800 Sobic007G205800--Sobic010G263800 Sobic008G034600 Sobic008G034600 Sobic007G205800--Sobic008G034600 Sobic004G271900 Sobic004G271900 Sobic007G205800--Sobic004G271900 Sobic009G022200 Sobic009G022200 Sobic007G205800--Sobic009G022200 Sobic007G205800--Sobic003G093600 Sobic003G258400 Sobic003G258400 Sobic007G205800--Sobic003G258400 Sobic002G077200 Sobic002G077200 Sobic007G205800--Sobic002G077200 Sobic002G272800--Sobic004G150400 Sobic002G272800--Sobic006G088100 Sobic002G272800--Sobic006G109300 Sobic003G074000 Sobic003G074000 Sobic002G272800--Sobic003G074000 Sobic003G437500 Sobic003G437500 Sobic002G272800--Sobic003G437500 Sobic002G272800--Sobic004G119000 Sobic002G272800--Sobic001G028400 Sobic010G033400 Sobic010G033400 Sobic002G272800--Sobic010G033400 Sobic001G309100 Sobic001G309100 Sobic002G272800--Sobic001G309100 Sobic010G071200--Sobic010G055500 Sobic010G071200--Sobic001G149700 Sobic010G071200--Sobic004G231400 Sobic010G071200--Sobic004G263900 Sobic010G071200--Sobic008G142700 Sobic010G071200--Sobic001G512900 Sobic001G478300 Sobic001G478300 Sobic010G071200--Sobic001G478300 Sobic006G257900 Sobic006G257900 Sobic010G071200--Sobic006G257900 Sobic001G083600 Sobic001G083600 Sobic010G071200--Sobic001G083600 Sobic001G028400--Sobic010G033400 Sobic007G063200 Sobic007G063200 Sobic001G028400--Sobic007G063200 Sobic001G056200 Sobic001G056200 Sobic001G028400--Sobic001G056200 Sobic001G028400--Sobic004G263900 Sobic003G359300 Sobic003G359300 Sobic001G028400--Sobic003G359300 Sobic007G205000 Sobic007G205000 Sobic001G028400--Sobic007G205000 Sobic001G028400--Sobic003G437500 Sobic007G118200 Sobic007G118200 Sobic001G028400--Sobic007G118200 Sobic010G211300 Sobic010G211300 Sobic001G028400--Sobic010G211300 Sobic006G088100--Sobic001G056200 Sobic006G088100--Sobic004G263900 Sobic003G202800 Sobic003G202800 Sobic006G088100--Sobic003G202800 Sobic006G088100--Sobic003G437500 Sobic003G261300 Sobic003G261300 Sobic006G088100--Sobic003G261300 Sobic006G209500 Sobic006G209500 Sobic006G088100--Sobic006G209500 Sobic001G119300 Sobic001G119300 Sobic006G088100--Sobic001G119300 Sobic002G350300 Sobic002G350300 Sobic006G088100--Sobic002G350300 Sobic006G128800 Sobic006G128800 Sobic006G088100--Sobic006G128800 Sobic007G023700 Sobic007G023700 Sobic003G093600--Sobic007G023700 Sobic003G093600--Sobic009G022200 Sobic003G093600--Sobic004G271900 Sobic003G093600--Sobic007G205800 Sobic004G143700 Sobic004G143700 Sobic003G093600--Sobic004G143700 Sobic009G156000 Sobic009G156000 Sobic003G093600--Sobic009G156000 Sobic003G093600--Sobic009G087800 Sobic003G093600--Sobic003G258400 Sobic001G424700 Sobic001G424700 Sobic003G093600--Sobic001G424700 Sobic006G109300--Sobic010G055500 Sobic006G109300--Sobic010G071200 Sobic006G109300--Sobic004G150400 Sobic006G109300--Sobic010G033400 Sobic006G109300--Sobic002G365100 Sobic006G109300--Sobic008G142700 Sobic001G131800 Sobic001G131800 Sobic006G109300--Sobic001G131800 Sobic006G109300--Sobic007G063200 Sobic006G109300--Sobic002G272800
Octagon: transcription factors


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