Gene annotation
Transcriptome id Sobic.004G119000.3,Sobic.004G119000.4,Sobic.004G119000.5,Sobic.004G119000.2,Sobic.004G119000.1
Synonym Sb04g009920
Functional annotation OsFBK6 - F-box domain and kelch repeat containing protein, expressed
UniProt A0A1Z5RMR0 , C5XZL0 , A0A194YP62
Pfam PF01344
Panther DB PTHR24412 PTHR24412:SF213
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G03030 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os02g21110.1 : OsFBK6 - F-box domain and kelch repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a019442
Brachypodium KQJ94522
Barley -
Wheat TraesCS6B02G157400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
2 Sobic.010G280100 expressed protein -
3 Sobic.001G291100 tetraspanin family protein, putative, expressed -
4 Sobic.003G185200 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
5 Sobic.002G272800 mediator of RNA polymerase II transcription subunit 10, putative, expressed K15151: MED10, mediator of RNA polymerase II transcription subunit 10
6 Sobic.009G087800 seven in absentia protein family domain containing protein, expressed K08742: E3 ubiquitin-protein ligase SIAH2
7 Sobic.010G268300 protein phosphatase 2C, putative, expressed -
8 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -
9 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
10 Sobic.010G000700 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
11 Sobic.006G109300 protein binding protein, putative, expressed -
12 Sobic.001G479300 EAP30/Vps36 family domain containing protein, expressed K12188: SNF8, ESCRT-II complex subunit VPS22
13 Sobic.003G324000 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed K00074: paaH, hbd, fadB, 3-hydroxybutyryl-CoA dehydrogenase
14 Sobic.003G437500 syntaxin 6, putative, expressed -
15 Sobic.007G088900 expressed protein -
16 Sobic.003G093600 methyltransferase, putative, expressed -
17 Sobic.009G198900 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
18 Sobic.002G090800 expressed protein -
19 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
20 Sobic.007G035600 MSP domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G119000 Sobic004G119000 Sobic004G150400 Sobic004G150400 Sobic004G119000--Sobic004G150400 Sobic010G280100 Sobic010G280100 Sobic004G119000--Sobic010G280100 Sobic001G291100 Sobic001G291100 Sobic004G119000--Sobic001G291100 Sobic003G185200 Sobic003G185200 Sobic004G119000--Sobic003G185200 Sobic002G272800 Sobic002G272800 Sobic004G119000--Sobic002G272800 Sobic009G087800 Sobic009G087800 Sobic004G119000--Sobic009G087800 Sobic010G268300 Sobic010G268300 Sobic004G119000--Sobic010G268300 Sobic002G365100 Sobic002G365100 Sobic004G119000--Sobic002G365100 Sobic007G205800 Sobic007G205800 Sobic004G119000--Sobic007G205800 Sobic004G150400--Sobic004G119000 Sobic010G055500 Sobic010G055500 Sobic004G150400--Sobic010G055500 Sobic004G150400--Sobic007G205800 Sobic004G150400--Sobic002G272800 Sobic010G071200 Sobic010G071200 Sobic004G150400--Sobic010G071200 Sobic001G028400 Sobic001G028400 Sobic004G150400--Sobic001G028400 Sobic006G088100 Sobic006G088100 Sobic004G150400--Sobic006G088100 Sobic003G093600 Sobic003G093600 Sobic004G150400--Sobic003G093600 Sobic006G109300 Sobic006G109300 Sobic004G150400--Sobic006G109300 Sobic009G198900 Sobic009G198900 Sobic010G280100--Sobic009G198900 Sobic010G280100--Sobic004G119000 Sobic003G324000 Sobic003G324000 Sobic010G280100--Sobic003G324000 Sobic007G052900 Sobic007G052900 Sobic010G280100--Sobic007G052900 Sobic008G136200 Sobic008G136200 Sobic010G280100--Sobic008G136200 Sobic010G280100--Sobic009G087800 Sobic010G280100--Sobic007G205800 Sobic001G368400 Sobic001G368400 Sobic010G280100--Sobic001G368400 Sobic006G273200 Sobic006G273200 Sobic010G280100--Sobic006G273200 Sobic009G157200 Sobic009G157200 Sobic001G291100--Sobic009G157200 Sobic001G281600 Sobic001G281600 Sobic001G291100--Sobic001G281600 Sobic001G291100--Sobic004G119000 Sobic010G056200 Sobic010G056200 Sobic001G291100--Sobic010G056200 Sobic001G119300 Sobic001G119300 Sobic001G291100--Sobic001G119300 Sobic001G291100--Sobic004G150400 Sobic001G107500 Sobic001G107500 Sobic001G291100--Sobic001G107500 Sobic001G291100--Sobic006G088100 Sobic004G083700 Sobic004G083700 Sobic001G291100--Sobic004G083700 Sobic003G185200--Sobic002G365100 Sobic010G174800 Sobic010G174800 Sobic003G185200--Sobic010G174800 Sobic003G248500 Sobic003G248500 Sobic003G185200--Sobic003G248500 Sobic010G202600 Sobic010G202600 Sobic003G185200--Sobic010G202600 Sobic003G261300 Sobic003G261300 Sobic003G185200--Sobic003G261300 Sobic010G000700 Sobic010G000700 Sobic003G185200--Sobic010G000700 Sobic006G128800 Sobic006G128800 Sobic003G185200--Sobic006G128800 Sobic004G263900 Sobic004G263900 Sobic003G185200--Sobic004G263900 Sobic003G336800 Sobic003G336800 Sobic003G185200--Sobic003G336800 Sobic002G272800--Sobic004G150400 Sobic002G272800--Sobic006G088100 Sobic002G272800--Sobic006G109300 Sobic003G074000 Sobic003G074000 Sobic002G272800--Sobic003G074000 Sobic003G437500 Sobic003G437500 Sobic002G272800--Sobic003G437500 Sobic002G272800--Sobic004G119000 Sobic002G272800--Sobic001G028400 Sobic010G033400 Sobic010G033400 Sobic002G272800--Sobic010G033400 Sobic001G309100 Sobic001G309100 Sobic002G272800--Sobic001G309100 Sobic009G087800--Sobic007G205800 Sobic003G258400 Sobic003G258400 Sobic009G087800--Sobic003G258400 Sobic007G011400 Sobic007G011400 Sobic009G087800--Sobic007G011400 Sobic009G087800--Sobic003G093600 Sobic004G271900 Sobic004G271900 Sobic009G087800--Sobic004G271900 Sobic010G263800 Sobic010G263800 Sobic009G087800--Sobic010G263800 Sobic010G026400 Sobic010G026400 Sobic009G087800--Sobic010G026400 Sobic001G424700 Sobic001G424700 Sobic009G087800--Sobic001G424700 Sobic009G087800--Sobic009G198900 Sobic010G268300--Sobic001G281600 Sobic002G122600 Sobic002G122600 Sobic010G268300--Sobic002G122600 Sobic010G268300--Sobic008G136200 Sobic003G401100 Sobic003G401100 Sobic010G268300--Sobic003G401100 Sobic009G215800 Sobic009G215800 Sobic010G268300--Sobic009G215800 Sobic004G246700 Sobic004G246700 Sobic010G268300--Sobic004G246700 Sobic004G021200 Sobic004G021200 Sobic010G268300--Sobic004G021200 Sobic007G009400 Sobic007G009400 Sobic010G268300--Sobic007G009400 Sobic010G279700 Sobic010G279700 Sobic010G268300--Sobic010G279700 Sobic002G365100--Sobic003G185200 Sobic002G365100--Sobic003G261300 Sobic002G365100--Sobic003G248500 Sobic003G359300 Sobic003G359300 Sobic002G365100--Sobic003G359300 Sobic002G365100--Sobic004G246700 Sobic002G365100--Sobic010G055500 Sobic002G365100--Sobic010G174800 Sobic002G365100--Sobic001G028400 Sobic002G365100--Sobic006G128800 Sobic007G205800--Sobic007G011400 Sobic007G205800--Sobic009G087800 Sobic007G205800--Sobic010G263800 Sobic008G034600 Sobic008G034600 Sobic007G205800--Sobic008G034600 Sobic007G205800--Sobic004G271900 Sobic009G022200 Sobic009G022200 Sobic007G205800--Sobic009G022200 Sobic007G205800--Sobic003G093600 Sobic007G205800--Sobic003G258400 Sobic002G077200 Sobic002G077200 Sobic007G205800--Sobic002G077200
Octagon: transcription factors


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